Experiment: D-Glucosamine Hydrochloride (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23470 and AO356_23475 are separated by 74 nucleotides AO356_23475 and AO356_23480 are separated by 119 nucleotides
AO356_23470: AO356_23470 - polyketide synthase, at 5,260,571 to 5,263,981
_23470
AO356_23475: AO356_23475 - polyketide synthase, at 5,264,056 to 5,265,147
_23475
AO356_23480: AO356_23480 - FAD-binding monooxygenase, at 5,265,267 to 5,267,030
_23480
Position (kb) 5264
5265
5266 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5263.089 kb on + strand, within AO356_23470 at 5263.090 kb on - strand, within AO356_23470 at 5263.090 kb on - strand, within AO356_23470 at 5263.782 kb on + strand at 5263.815 kb on + strand at 5263.815 kb on + strand at 5263.815 kb on + strand at 5263.816 kb on - strand at 5263.981 kb on + strand at 5263.982 kb on - strand at 5264.495 kb on + strand, within AO356_23475 at 5264.698 kb on - strand, within AO356_23475 at 5264.698 kb on - strand, within AO356_23475 at 5264.810 kb on + strand, within AO356_23475 at 5264.811 kb on - strand, within AO356_23475 at 5264.811 kb on - strand, within AO356_23475 at 5264.863 kb on + strand, within AO356_23475 at 5264.937 kb on - strand, within AO356_23475 at 5265.080 kb on + strand at 5265.081 kb on - strand at 5265.091 kb on + strand at 5265.147 kb on + strand at 5265.147 kb on + strand at 5265.158 kb on + strand at 5265.182 kb on - strand at 5265.228 kb on + strand at 5265.229 kb on - strand at 5265.229 kb on - strand at 5265.230 kb on + strand at 5265.230 kb on + strand at 5265.231 kb on - strand at 5265.269 kb on - strand at 5265.339 kb on + strand at 5265.339 kb on + strand at 5265.340 kb on - strand at 5265.340 kb on - strand at 5265.349 kb on + strand at 5265.349 kb on + strand at 5265.349 kb on + strand at 5265.350 kb on - strand at 5265.350 kb on - strand at 5265.523 kb on + strand, within AO356_23480 at 5265.524 kb on - strand, within AO356_23480 at 5265.524 kb on - strand, within AO356_23480 at 5265.571 kb on + strand, within AO356_23480 at 5265.572 kb on - strand, within AO356_23480 at 5265.574 kb on + strand, within AO356_23480 at 5265.756 kb on - strand, within AO356_23480 at 5265.756 kb on - strand, within AO356_23480 at 5265.799 kb on + strand, within AO356_23480 at 5265.799 kb on + strand, within AO356_23480 at 5265.799 kb on + strand, within AO356_23480 at 5265.799 kb on + strand, within AO356_23480 at 5265.800 kb on - strand, within AO356_23480 at 5265.800 kb on - strand, within AO356_23480 at 5265.800 kb on - strand, within AO356_23480 at 5265.814 kb on + strand, within AO356_23480 at 5265.815 kb on - strand, within AO356_23480 at 5265.820 kb on + strand, within AO356_23480 at 5266.039 kb on + strand, within AO356_23480 at 5266.039 kb on + strand, within AO356_23480 at 5266.040 kb on - strand, within AO356_23480 at 5266.061 kb on + strand, within AO356_23480 at 5266.061 kb on + strand, within AO356_23480 at 5266.062 kb on - strand, within AO356_23480 at 5266.063 kb on + strand, within AO356_23480 at 5266.063 kb on + strand, within AO356_23480
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C) remove 5,263,089 + AO356_23470 0.74 +0.9 5,263,090 - AO356_23470 0.74 +0.9 5,263,090 - AO356_23470 0.74 -1.0 5,263,782 + -0.2 5,263,815 + -0.1 5,263,815 + -0.1 5,263,815 + -1.1 5,263,816 - +0.1 5,263,981 + +0.7 5,263,982 - +0.4 5,264,495 + AO356_23475 0.40 -0.5 5,264,698 - AO356_23475 0.59 +0.1 5,264,698 - AO356_23475 0.59 -0.3 5,264,810 + AO356_23475 0.69 -1.1 5,264,811 - AO356_23475 0.69 -0.3 5,264,811 - AO356_23475 0.69 -0.6 5,264,863 + AO356_23475 0.74 -1.1 5,264,937 - AO356_23475 0.81 -0.2 5,265,080 + -1.5 5,265,081 - -0.9 5,265,091 + -1.6 5,265,147 + -0.6 5,265,147 + -0.6 5,265,158 + +0.3 5,265,182 - +0.9 5,265,228 + -0.1 5,265,229 - +0.4 5,265,229 - +0.0 5,265,230 + -0.8 5,265,230 + +0.5 5,265,231 - +0.5 5,265,269 - -0.9 5,265,339 + -0.1 5,265,339 + -0.1 5,265,340 - +0.3 5,265,340 - +0.1 5,265,349 + -0.2 5,265,349 + -1.6 5,265,349 + -0.5 5,265,350 - +1.0 5,265,350 - -0.3 5,265,523 + AO356_23480 0.15 -0.3 5,265,524 - AO356_23480 0.15 -1.8 5,265,524 - AO356_23480 0.15 +0.1 5,265,571 + AO356_23480 0.17 -0.3 5,265,572 - AO356_23480 0.17 -0.2 5,265,574 + AO356_23480 0.17 +0.3 5,265,756 - AO356_23480 0.28 +1.5 5,265,756 - AO356_23480 0.28 -0.4 5,265,799 + AO356_23480 0.30 -0.4 5,265,799 + AO356_23480 0.30 -0.9 5,265,799 + AO356_23480 0.30 -0.5 5,265,799 + AO356_23480 0.30 +0.9 5,265,800 - AO356_23480 0.30 +0.7 5,265,800 - AO356_23480 0.30 +0.1 5,265,800 - AO356_23480 0.30 +1.9 5,265,814 + AO356_23480 0.31 +1.2 5,265,815 - AO356_23480 0.31 +0.3 5,265,820 + AO356_23480 0.31 +1.4 5,266,039 + AO356_23480 0.44 -0.2 5,266,039 + AO356_23480 0.44 +0.2 5,266,040 - AO356_23480 0.44 +1.3 5,266,061 + AO356_23480 0.45 -0.3 5,266,061 + AO356_23480 0.45 -0.2 5,266,062 - AO356_23480 0.45 -0.4 5,266,063 + AO356_23480 0.45 +0.0 5,266,063 + AO356_23480 0.45 -0.3
Or see this region's nucleotide sequence