Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4071

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
2,968	+				-0.1
3,063	+				-1.3
3,114	-				+0.5
3,135	+				+0.1
3,135	+				-0.4
3,135	+				+1.8
3,136	+				-0.3
3,143	-				-0.1
3,143	-				+0.0
3,143	-				-0.5
3,143	-				+0.4
3,143	-				-1.0
3,144	-				-0.5
3,144	-				-0.7
3,162	+				-0.4
3,164	+				-0.4
3,164	+				-1.4
3,170	-				-0.5
3,170	-				+0.2
3,172	-				+0.2
3,172	-				-1.0
5,257	+		Dshi_4071	0.63	+0.6
5,257	+		Dshi_4071	0.63	+0.8
5,284	-		Dshi_4071	0.64	+0.3
5,304	-		Dshi_4071	0.64	-0.5
5,326	+		Dshi_4071	0.65	+0.4
5,354	-		Dshi_4071	0.66	+0.1
5,354	-		Dshi_4071	0.66	-0.7
5,354	-		Dshi_4071	0.66	-0.3
5,354	-		Dshi_4071	0.66	+0.4
5,381	+		Dshi_4071	0.66	-0.3
5,382	-		Dshi_4071	0.66	-0.7
5,391	+		Dshi_4071	0.67	-1.3
5,399	-		Dshi_4071	0.67	-0.2
5,399	-		Dshi_4071	0.67	-0.9
5,416	+		Dshi_4071	0.68	-0.3
5,416	-		Dshi_4071	0.68	-0.2
5,424	-		Dshi_4071	0.68	-0.4
5,451	-		Dshi_4071	0.69	-1.2
5,451	-		Dshi_4071	0.69	-0.4
5,468	+		Dshi_4071	0.69	-0.8
5,489	+		Dshi_4071	0.70	-1.1
5,489	+		Dshi_4071	0.70	-0.3
5,491	+		Dshi_4071	0.70	+0.3
5,492	-		Dshi_4071	0.70	-0.9
5,497	-		Dshi_4071	0.70	-0.7
5,499	+		Dshi_4071	0.70	+0.5
5,507	-		Dshi_4071	0.70	+0.6
5,507	-		Dshi_4071	0.70	-0.8
5,514	+		Dshi_4071	0.70	+0.2
5,518	-		Dshi_4071	0.71	+0.9
5,532	+		Dshi_4071	0.71	+0.1
5,540	-		Dshi_4071	0.71	-1.3
5,553	+		Dshi_4071	0.72	-0.3
5,557	+		Dshi_4071	0.72	+0.4
5,563	+		Dshi_4071	0.72	+0.1
5,563	+		Dshi_4071	0.72	+0.6
5,563	+		Dshi_4071	0.72	-0.6
5,563	+		Dshi_4071	0.72	+0.4
5,563	+		Dshi_4071	0.72	-0.2
5,566	-		Dshi_4071	0.72	+0.0
5,568	+		Dshi_4071	0.72	-0.0
5,571	-		Dshi_4071	0.72	-0.0
5,576	-		Dshi_4071	0.72	+0.8
5,578	-		Dshi_4071	0.72	-0.7
5,584	+		Dshi_4071	0.73	-0.0
5,635	+		Dshi_4071	0.74	+0.3
5,640	+		Dshi_4071	0.74	-1.7
5,640	+		Dshi_4071	0.74	-0.6
5,640	+		Dshi_4071	0.74	+2.0
5,648	-		Dshi_4071	0.74	-0.2
5,656	+		Dshi_4071	0.75	-0.5
5,656	+		Dshi_4071	0.75	+0.4
5,662	+		Dshi_4071	0.75	-0.4
5,664	-		Dshi_4071	0.75	-0.5
5,664	-		Dshi_4071	0.75	-0.5
5,664	-		Dshi_4071	0.75	-0.2
5,664	-		Dshi_4071	0.75	-4.0
5,664	-		Dshi_4071	0.75	-1.2
5,665	+		Dshi_4071	0.75	-0.2
5,665	+		Dshi_4071	0.75	-0.6
5,665	+		Dshi_4071	0.75	+0.5
5,723	+		Dshi_4071	0.77	-2.7
5,724	-		Dshi_4071	0.77	+0.9
5,733	-		Dshi_4071	0.77	-0.7
5,775	+		Dshi_4071	0.78	+0.4
5,775	+		Dshi_4071	0.78	+0.4
5,775	+		Dshi_4071	0.78	-0.3
5,783	-		Dshi_4071	0.79	+0.4
5,783	-		Dshi_4071	0.79	+0.7
5,783	-		Dshi_4071	0.79	+0.1
5,783	-		Dshi_4071	0.79	+1.6
5,784	+		Dshi_4071	0.79	+1.1
5,787	-		Dshi_4071	0.79	+2.9
5,788	-		Dshi_4071	0.79	-1.3
5,856	+		Dshi_4071	0.81	-0.2
5,864	-		Dshi_4071	0.81	-0.6
5,871	+		Dshi_4071	0.81	-2.0
5,875	+		Dshi_4071	0.81	-0.3
5,888	-		Dshi_4071	0.82	+0.0
5,893	-		Dshi_4071	0.82	-0.8
5,929	+		Dshi_4071	0.83	-0.6
5,943	+		Dshi_4071	0.83	-0.9
5,943	+		Dshi_4071	0.83	+1.2
5,953	+		Dshi_4071	0.84	-1.0
5,958	+		Dshi_4071	0.84	-0.6
5,968	-		Dshi_4071	0.84	-0.8
6,004	-		Dshi_4071	0.85	+0.7
6,006	-		Dshi_4071	0.85	-0.8
6,036	-		Dshi_4071	0.86	+0.4
6,039	+		Dshi_4071	0.86	-0.8
6,081	+		Dshi_4071	0.87	-1.0
6,081	+		Dshi_4071	0.87	+0.7
6,089	+		Dshi_4071	0.88	+0.4
6,089	+		Dshi_4071	0.88	-0.7
6,089	+		Dshi_4071	0.88	+0.5
6,089	-		Dshi_4071	0.88	-0.5
6,089	-		Dshi_4071	0.88	+0.4
6,089	-		Dshi_4071	0.88	-0.5
6,089	-		Dshi_4071	0.88	-0.2
6,094	+		Dshi_4071	0.88	-0.7
6,097	-		Dshi_4071	0.88	-0.9
6,097	-		Dshi_4071	0.88	+0.4
6,099	+		Dshi_4071	0.88	+0.4
6,099	+		Dshi_4071	0.88	-0.8
6,099	+		Dshi_4071	0.88	-1.2
6,099	+		Dshi_4071	0.88	-1.2
6,099	+		Dshi_4071	0.88	-0.4
6,099	+		Dshi_4071	0.88	-0.2
6,099	+		Dshi_4071	0.88	+0.5
6,099	+		Dshi_4071	0.88	+0.3
6,099	+		Dshi_4071	0.88	+0.1
6,099	+		Dshi_4071	0.88	-1.0
6,099	-		Dshi_4071	0.88	+0.3
6,101	+		Dshi_4071	0.88	-2.2
6,106	+		Dshi_4071	0.88	+1.2
6,107	-		Dshi_4071	0.88	-0.2
6,107	-		Dshi_4071	0.88	-0.4
6,107	-		Dshi_4071	0.88	+0.0
6,107	-		Dshi_4071	0.88	-0.1
6,107	-		Dshi_4071	0.88	-0.7
6,107	-		Dshi_4071	0.88	-0.3
6,107	-		Dshi_4071	0.88	-0.6
6,107	-		Dshi_4071	0.88	-0.2
6,107	-		Dshi_4071	0.88	+0.0
6,107	-		Dshi_4071	0.88	-1.5
6,107	-		Dshi_4071	0.88	-0.9
6,107	-		Dshi_4071	0.88	-0.4
6,107	-		Dshi_4071	0.88	-0.3
6,107	-		Dshi_4071	0.88	-1.4
6,109	+		Dshi_4071	0.88	+0.4
6,109	+		Dshi_4071	0.88	-1.2
6,109	-		Dshi_4071	0.88	+0.2
6,114	+		Dshi_4071	0.88	+0.1
6,114	+		Dshi_4071	0.88	+2.4
6,114	+		Dshi_4071	0.88	-0.2
6,114	+		Dshi_4071	0.88	-0.2
6,114	+		Dshi_4071	0.88	+0.1
6,114	-		Dshi_4071	0.88	-1.2
6,114	-		Dshi_4071	0.88	-0.2
6,116	+		Dshi_4071	0.89	-0.4
6,116	+		Dshi_4071	0.89	+0.8
6,116	+		Dshi_4071	0.89	-1.2
6,116	+		Dshi_4071	0.89	-0.9
6,116	+		Dshi_4071	0.89	+0.7
6,116	+		Dshi_4071	0.89	+0.3
6,117	-		Dshi_4071	0.89	+0.3
6,122	-		Dshi_4071	0.89	+0.4
6,122	-		Dshi_4071	0.89	-0.3
6,122	-		Dshi_4071	0.89	+0.2
6,124	-		Dshi_4071	0.89	-0.6
6,124	-		Dshi_4071	0.89	+0.4
6,124	-		Dshi_4071	0.89	-0.6
6,124	-		Dshi_4071	0.89	-0.3
6,124	-		Dshi_4071	0.89	+1.7
6,126	+		Dshi_4071	0.89	-0.6
6,134	+		Dshi_4071	0.89	-0.8
6,134	+		Dshi_4071	0.89	+0.2
6,134	+		Dshi_4071	0.89	+0.2
6,148	+		Dshi_4071	0.89	-0.3
6,149	-		Dshi_4071	0.90	+0.7
6,158	+		Dshi_4071	0.90	-0.6
6,165	+				-0.2
6,167	+				-0.3
6,167	+				+0.1
6,167	+				-0.7
6,167	+				+0.2
6,167	+				-0.4
6,172	+				-1.2
6,180	-				-0.3
6,180	-				+1.8
6,185	-				-0.9
6,189	-				-0.6
6,192	-				+0.2
6,194	+				-0.1
6,194	+				-0.7
6,194	+				-0.7
6,202	-				+0.1
6,202	-				-1.7
6,202	-				+0.7
6,202	-				+0.4
6,202	-				+0.4
6,202	-				-1.3
6,202	-				-0.3
6,202	-				-1.7
6,202	-				-0.7
6,238	+				+0.3
6,238	+				-1.0
6,238	+				+0.1
6,238	+				-1.6
6,263	+				+0.4
6,271	-				+0.5
6,273	-				-1.1
6,273	-				-1.0
6,286	+				-1.2
6,286	+				-0.6
6,286	+				-1.1
6,286	+				-1.4
6,294	-				+0.3
6,294	-				+0.3
6,302	+				-0.0
6,332	-				-0.2
6,332	-				+0.3
6,332	-				+0.4
6,345	+				-0.7
6,345	-				-0.4
6,348	-				-1.2
6,353	-				-0.6
6,354	+				-1.6
6,359	+				-0.6
6,362	-				-0.7
6,369	-				-1.4
6,371	+				+0.0
6,419	-				+0.2
6,426	+				-1.3
6,426	+				-0.7
6,426	+				-0.3
6,434	-				-0.3
6,434	-				+1.3
6,440	+				-0.7
6,448	-				-0.2
6,448	-				+0.3
6,448	-				-0.9
6,448	-				+1.2
6,458	-				+0.1
6,497	-				-0.7
6,504	+				+0.7
6,504	+				-0.3
6,504	+				-0.0
6,504	+				-0.8
6,505	+				+0.1
6,512	-				-0.0
6,519	+				+1.4
6,522	-				+0.6
6,522	-				+0.1
6,525	+				+0.4
6,542	-				-0.4
6,550	-				-0.9
6,581	+				-0.2
6,581	+				-0.0
6,581	+				-0.2
6,581	+				-0.4
6,581	+				-1.4
6,589	-				+0.5
6,589	-				-0.7
6,595	+				+0.4
6,600	+				-2.0
6,603	-				+0.2
6,621	+				+0.2
6,622	+				-1.2
6,629	-				+0.1
6,639	-				-0.6
6,663	+				-0.4
6,671	-				-0.6
6,673	+				+1.6
6,691	-				+0.4
6,705	+				+0.1
6,705	+				+0.6
6,705	+				+0.1
6,705	+				+1.2
6,705	+				-0.6
6,705	+				-1.0
6,713	-				+0.3
6,713	-				-1.0
6,713	-				-0.5
6,713	-				-0.3
6,713	-				+0.7
6,715	+				-0.2
6,748	-				+1.2
6,748	-				-0.8
6,748	-				+0.1
6,755	+				-0.5
6,755	+				-0.4
6,759	+				-0.7
6,759	+				+0.8
6,759	+				-1.6
6,759	+				+0.1
6,759	+				-0.9
6,760	+				+0.3
6,763	-				-1.6
6,763	-				-0.0
6,763	-				-0.6
6,763	-				-0.4
6,767	-				+0.1
6,767	-				-0.6
6,767	-				+0.4
6,767	-				+0.3
6,768	-				+0.3
6,771	+				+0.6
6,771	+				-1.8
6,771	+				-1.0
6,771	+				-0.9
6,771	+				-0.2
6,771	+				-0.8
6,771	+				+1.0
6,771	+				-0.8
6,771	+				+1.5
6,771	+				+0.5
6,771	+				-0.1
6,771	+				-0.2
6,771	+				-0.2
6,772	-				+0.1
6,772	-				-0.3
6,779	-				-0.6
6,779	-				+0.2
6,779	-				-0.2
6,779	-				+0.0
6,779	-				-0.3
6,779	-				-2.7
6,796	+				+0.0
6,804	-				+0.4
6,806	+				+0.2
6,809	+				+0.8
6,809	+				-0.2
6,809	+				-0.8
6,811	+				+0.5
6,817	-				-0.4
6,817	-				+0.2
6,817	-				-0.0
6,819	+				-0.4
6,819	+				-0.8
6,827	-				-0.6
6,827	-				+0.4
6,827	-				+0.0
6,831	+				+0.6
6,852	-				-0.4
6,854	+				+1.4
6,856	+				+0.2
6,856	+				-0.3
6,862	-				-0.8
6,864	-				-0.7
6,864	-				+1.3
6,864	-				-0.4
6,864	-				-0.1
6,864	-				-0.3
6,864	-				+0.2
6,864	-				-0.1
6,864	-				+0.3
6,864	-				-0.2
6,881	+				-0.6
6,905	-				+0.3
6,924	-				-3.5
6,927	+				-0.2
6,971	-				-1.1
6,973	-				+0.7
6,983	+				-1.2
6,988	+				+0.2
6,991	-				-0.5
7,004	+				-1.5
7,004	+				-1.4
7,009	+				+1.2
7,009	+				-0.1
7,009	+				-0.2
7,009	+				-0.6
7,009	+				+0.6
7,009	+				+0.3
7,009	+				+0.3
7,017	-				-0.8
7,017	-				+0.2
7,017	-				-1.7
7,017	-				+1.8
7,056	+				+0.3
7,060	+				+0.0
7,062	-				-0.9
7,062	-				+0.5
7,064	-				+0.4
7,068	-				-0.3
7,068	-				-0.1
7,080	+				-0.7
7,088	-				-0.0
7,102	-				+0.6
7,104	+				+0.3
7,104	+				+1.7
7,104	+				-0.4
7,105	+				+0.1
7,111	-				-0.6
7,112	-				-0.5
7,112	-				-0.6
7,112	-				+1.0
7,112	-				-1.4
7,112	-				-0.0
7,112	-				-0.9
7,112	-				-0.9
7,112	-				-0.6
7,112	-				+0.3
7,113	-				-3.2
7,117	-				+1.2
7,117	-				-1.4
7,117	-				-0.1
7,120	+				-0.6
7,120	+				+0.1
7,128	+				-0.1
7,128	+				-0.2
7,149	-				-0.6
7,176	+				-0.3
7,179	-				+0.2
7,184	-				-0.3
7,184	-				-1.0
7,194	-				+0.8
7,203	+				+0.1
7,211	-				+0.4
7,211	-				+0.1
7,211	-				+0.2
7,254	-				+0.4
7,270	+				-0.5
7,278	-				-0.6
7,278	-				-0.2
7,307	+				-0.9
7,307	+				-0.6
7,307	+				-3.2
7,308	+				+0.4
7,315	-				-0.1
7,315	-				-0.6
7,316	-				+1.3
7,321	-				-1.4
7,329	+				-0.2
7,329	+				-1.2
7,337	-				+0.1
7,381	+				+0.4
7,432	+				-0.5
7,434	+				+0.2
7,434	+				-0.5
7,446	+				-0.1
7,446	+				-0.0
7,450	-				-0.5
7,454	-				-0.2
7,462	+				-0.9
7,462	+				-0.6
7,470	-				+1.9
7,481	-				-0.5
7,485	-				-1.5
7,486	-				+0.7
7,492	-				+0.4
7,492	-				+0.8