Experiment: casaminos 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK54_RS03680 and LRK54_RS03685 are separated by 54 nucleotides LRK54_RS03685 and LRK54_RS03690 are separated by 114 nucleotides LRK54_RS03690 and LRK54_RS03695 are separated by 51 nucleotides LRK54_RS03695 and LRK54_RS03700 are separated by 49 nucleotides
LRK54_RS03680: LRK54_RS03680 - aminoacyl-tRNA hydrolase, at 780,975 to 781,556
_RS03680
LRK54_RS03685: LRK54_RS03685 - 50S ribosomal protein L25/general stress protein Ctc, at 781,611 to 782,276
_RS03685
LRK54_RS03690: LRK54_RS03690 - ribose-phosphate diphosphokinase, at 782,391 to 783,332
_RS03690
LRK54_RS03695: LRK54_RS03695 - tRNA-Gln, at 783,384 to 783,460
_RS03695
LRK54_RS03700: LRK54_RS03700 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 783,510 to 784,892
_RS03700
Position (kb) 782
783
784 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 782.385 kb on - strand at 782.385 kb on - strand at 782.385 kb on - strand at 782.385 kb on - strand at 782.385 kb on - strand at 782.385 kb on - strand at 782.385 kb on - strand at 783.354 kb on - strand at 783.354 kb on - strand at 783.354 kb on - strand at 783.354 kb on - strand at 783.358 kb on - strand at 783.358 kb on - strand at 783.358 kb on - strand at 783.358 kb on - strand at 783.358 kb on - strand at 783.358 kb on - strand at 783.358 kb on - strand at 783.358 kb on - strand at 783.358 kb on - strand at 783.358 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.466 kb on - strand at 783.468 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.474 kb on - strand at 783.498 kb on - strand at 783.498 kb on - strand at 783.498 kb on - strand at 783.498 kb on - strand at 783.498 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos 2 mg/mL remove 782,385 - +1.5 782,385 - -0.5 782,385 - -0.0 782,385 - +0.5 782,385 - +0.1 782,385 - +0.1 782,385 - -0.5 783,354 - +0.5 783,354 - -1.0 783,354 - -0.8 783,354 - +0.5 783,358 - -0.9 783,358 - -1.0 783,358 - -1.1 783,358 - -0.5 783,358 - -1.3 783,358 - -3.0 783,358 - -0.0 783,358 - -1.5 783,358 - +1.5 783,358 - -1.5 783,466 - +0.2 783,466 - -1.3 783,466 - +0.7 783,466 - +0.0 783,466 - +0.4 783,466 - +0.5 783,466 - +0.5 783,466 - -1.0 783,466 - +0.5 783,466 - +0.6 783,466 - -0.2 783,466 - -0.6 783,466 - +2.5 783,466 - +0.1 783,466 - -0.4 783,466 - -1.0 783,466 - +0.9 783,466 - -0.7 783,466 - +0.7 783,466 - +0.1 783,466 - +1.5 783,466 - -1.3 783,466 - -0.0 783,466 - +0.4 783,466 - -0.2 783,466 - -1.4 783,466 - +0.4 783,466 - +0.2 783,466 - +0.8 783,466 - -0.1 783,466 - +0.9 783,466 - -1.0 783,466 - -1.5 783,466 - +1.1 783,466 - -1.0 783,466 - -0.0 783,466 - -0.5 783,466 - +0.5 783,466 - +0.2 783,466 - -0.6 783,466 - +0.3 783,466 - -0.5 783,466 - -0.1 783,466 - -0.2 783,466 - +0.4 783,466 - +0.3 783,466 - +2.5 783,466 - -0.5 783,466 - +0.3 783,466 - -0.4 783,466 - +0.3 783,466 - -0.9 783,466 - -0.3 783,466 - +0.1 783,466 - -0.8 783,466 - +1.0 783,466 - -1.2 783,466 - -0.6 783,466 - -0.3 783,466 - +0.1 783,466 - +0.8 783,466 - -1.5 783,466 - -0.0 783,466 - -0.6 783,466 - +0.2 783,466 - -0.2 783,466 - +0.3 783,466 - +2.5 783,468 - +0.1 783,474 - -0.0 783,474 - +1.0 783,474 - -0.2 783,474 - -1.3 783,474 - -0.4 783,474 - +0.2 783,474 - +1.1 783,474 - -0.0 783,474 - -0.5 783,474 - -0.5 783,474 - +1.0 783,474 - +0.5 783,474 - +0.1 783,474 - -1.6 783,474 - -1.2 783,474 - -0.3 783,474 - -0.4 783,474 - +0.3 783,474 - -1.6 783,474 - +1.5 783,474 - -0.2 783,474 - -0.3 783,474 - -0.8 783,474 - -1.5 783,474 - +0.7 783,474 - +0.4 783,474 - +0.0 783,474 - -0.6 783,474 - -0.3 783,474 - -0.0 783,474 - -1.2 783,474 - +0.2 783,474 - -1.1 783,474 - +0.5 783,474 - +0.4 783,474 - +0.2 783,474 - -1.3 783,498 - -0.3 783,498 - +0.5 783,498 - +0.4 783,498 - +0.5 783,498 - -0.5
Or see this region's nucleotide sequence