Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17370 and AO356_17375 are separated by 98 nucleotides AO356_17375 and AO356_17380 are separated by 472 nucleotides
AO356_17370: AO356_17370 - ATP-dependent RNA helicase RhlB, at 3,914,055 to 3,915,518
_17370
AO356_17375: AO356_17375 - carboxylesterase, at 3,915,617 to 3,916,273
_17375
AO356_17380: AO356_17380 - amino acid ABC transporter substrate-binding protein, at 3,916,746 to 3,917,777
_17380
Position (kb)
3915
3916
3917 Strain fitness (log2 ratio)
-1
0
1
2 at 3914.923 kb on + strand, within AO356_17370 at 3914.923 kb on + strand, within AO356_17370 at 3914.923 kb on + strand, within AO356_17370 at 3914.923 kb on + strand, within AO356_17370 at 3914.923 kb on + strand, within AO356_17370 at 3914.924 kb on - strand, within AO356_17370 at 3914.924 kb on - strand, within AO356_17370 at 3914.924 kb on - strand, within AO356_17370 at 3914.924 kb on - strand, within AO356_17370 at 3915.010 kb on + strand, within AO356_17370 at 3915.010 kb on + strand, within AO356_17370 at 3915.010 kb on + strand, within AO356_17370 at 3915.010 kb on + strand, within AO356_17370 at 3915.010 kb on + strand, within AO356_17370 at 3915.010 kb on + strand, within AO356_17370 at 3915.011 kb on - strand, within AO356_17370 at 3915.011 kb on - strand, within AO356_17370 at 3915.011 kb on - strand, within AO356_17370 at 3915.011 kb on - strand, within AO356_17370 at 3915.011 kb on - strand at 3915.011 kb on - strand, within AO356_17370 at 3915.127 kb on + strand, within AO356_17370 at 3915.247 kb on - strand, within AO356_17370 at 3915.247 kb on - strand, within AO356_17370 at 3915.247 kb on - strand, within AO356_17370 at 3915.482 kb on + strand at 3915.482 kb on + strand at 3915.482 kb on + strand at 3915.533 kb on - strand at 3915.541 kb on + strand at 3915.541 kb on + strand at 3915.542 kb on - strand at 3915.542 kb on - strand at 3915.555 kb on + strand at 3915.555 kb on + strand at 3915.555 kb on + strand at 3915.555 kb on + strand at 3915.555 kb on + strand at 3915.556 kb on - strand at 3915.556 kb on - strand at 3915.556 kb on - strand at 3915.556 kb on - strand at 3915.556 kb on - strand at 3915.556 kb on - strand at 3915.579 kb on - strand at 3915.579 kb on - strand at 3915.691 kb on - strand, within AO356_17375 at 3915.730 kb on - strand, within AO356_17375 at 3915.761 kb on + strand, within AO356_17375 at 3915.775 kb on - strand, within AO356_17375 at 3915.852 kb on + strand, within AO356_17375 at 3915.852 kb on + strand, within AO356_17375 at 3915.852 kb on + strand, within AO356_17375 at 3915.852 kb on + strand, within AO356_17375 at 3915.852 kb on + strand, within AO356_17375 at 3915.852 kb on + strand, within AO356_17375 at 3915.852 kb on + strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.853 kb on - strand, within AO356_17375 at 3915.857 kb on - strand, within AO356_17375 at 3915.857 kb on - strand, within AO356_17375 at 3915.857 kb on - strand, within AO356_17375 at 3915.857 kb on - strand, within AO356_17375 at 3915.857 kb on - strand, within AO356_17375 at 3915.857 kb on - strand, within AO356_17375 at 3915.857 kb on - strand, within AO356_17375 at 3915.857 kb on - strand, within AO356_17375 at 3915.912 kb on + strand, within AO356_17375 at 3915.913 kb on - strand, within AO356_17375 at 3915.913 kb on - strand, within AO356_17375 at 3915.965 kb on + strand, within AO356_17375 at 3916.071 kb on + strand, within AO356_17375 at 3916.072 kb on - strand, within AO356_17375 at 3916.090 kb on - strand, within AO356_17375 at 3916.090 kb on - strand, within AO356_17375 at 3916.191 kb on + strand, within AO356_17375 at 3916.222 kb on + strand at 3916.223 kb on - strand at 3916.223 kb on - strand at 3916.319 kb on + strand at 3916.320 kb on - strand at 3916.345 kb on - strand at 3916.345 kb on - strand at 3916.348 kb on + strand at 3916.348 kb on + strand at 3916.348 kb on + strand at 3916.349 kb on - strand at 3916.349 kb on - strand at 3916.349 kb on - strand at 3916.388 kb on + strand at 3916.389 kb on - strand at 3916.451 kb on + strand at 3916.452 kb on - strand at 3916.452 kb on - strand at 3916.452 kb on - strand at 3916.452 kb on - strand at 3916.469 kb on + strand at 3916.469 kb on + strand at 3916.469 kb on + strand at 3916.469 kb on + strand at 3916.469 kb on + strand at 3916.469 kb on + strand at 3916.469 kb on + strand at 3916.470 kb on - strand at 3916.476 kb on + strand at 3916.477 kb on - strand at 3916.477 kb on - strand at 3916.477 kb on - strand at 3916.477 kb on - strand at 3916.495 kb on - strand at 3916.558 kb on - strand at 3916.558 kb on - strand at 3916.603 kb on + strand at 3916.618 kb on + strand at 3916.619 kb on - strand at 3916.619 kb on - strand at 3916.619 kb on - strand at 3916.619 kb on - strand at 3916.619 kb on - strand at 3916.619 kb on - strand at 3916.621 kb on + strand at 3916.622 kb on - strand at 3916.622 kb on - strand at 3916.622 kb on - strand at 3916.622 kb on - strand at 3916.622 kb on - strand at 3916.629 kb on + strand at 3916.630 kb on - strand at 3916.630 kb on - strand at 3916.630 kb on - strand at 3916.753 kb on + strand at 3916.754 kb on - strand at 3916.793 kb on - strand at 3916.793 kb on - strand at 3916.793 kb on - strand at 3916.793 kb on - strand at 3917.121 kb on + strand, within AO356_17380 at 3917.121 kb on + strand, within AO356_17380 at 3917.121 kb on + strand, within AO356_17380 at 3917.121 kb on + strand, within AO356_17380 at 3917.121 kb on + strand, within AO356_17380 at 3917.122 kb on - strand, within AO356_17380 at 3917.122 kb on - strand, within AO356_17380 at 3917.122 kb on - strand, within AO356_17380 at 3917.122 kb on - strand, within AO356_17380 at 3917.122 kb on - strand, within AO356_17380 at 3917.122 kb on - strand, within AO356_17380 at 3917.122 kb on - strand, within AO356_17380 at 3917.124 kb on + strand, within AO356_17380 at 3917.124 kb on + strand, within AO356_17380 at 3917.124 kb on + strand, within AO356_17380 at 3917.124 kb on + strand, within AO356_17380 at 3917.124 kb on + strand, within AO356_17380 at 3917.124 kb on + strand, within AO356_17380 at 3917.124 kb on + strand, within AO356_17380 at 3917.124 kb on + strand, within AO356_17380 at 3917.124 kb on + strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.125 kb on - strand, within AO356_17380 at 3917.242 kb on - strand, within AO356_17380 at 3917.265 kb on + strand, within AO356_17380 at 3917.265 kb on + strand, within AO356_17380 at 3917.265 kb on + strand, within AO356_17380 at 3917.266 kb on - strand, within AO356_17380
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 3,914,923 + AO356_17370 0.59 -0.0 3,914,923 + AO356_17370 0.59 +0.1 3,914,923 + AO356_17370 0.59 +0.5 3,914,923 + AO356_17370 0.59 -0.4 3,914,923 + AO356_17370 0.59 +0.4 3,914,924 - AO356_17370 0.59 -0.3 3,914,924 - AO356_17370 0.59 +0.2 3,914,924 - AO356_17370 0.59 +0.6 3,914,924 - AO356_17370 0.59 +0.6 3,915,010 + AO356_17370 0.65 -1.1 3,915,010 + AO356_17370 0.65 +1.8 3,915,010 + AO356_17370 0.65 -0.4 3,915,010 + AO356_17370 0.65 -0.6 3,915,010 + AO356_17370 0.65 +0.5 3,915,010 + AO356_17370 0.65 -1.2 3,915,011 - AO356_17370 0.65 +1.0 3,915,011 - AO356_17370 0.65 +0.4 3,915,011 - AO356_17370 0.65 -0.5 3,915,011 - AO356_17370 0.65 +0.9 3,915,011 - +0.8 3,915,011 - AO356_17370 0.65 -0.8 3,915,127 + AO356_17370 0.73 -1.7 3,915,247 - AO356_17370 0.81 +1.6 3,915,247 - AO356_17370 0.81 -1.0 3,915,247 - AO356_17370 0.81 -0.1 3,915,482 + -0.5 3,915,482 + +0.1 3,915,482 + +0.1 3,915,533 - +1.3 3,915,541 + -0.5 3,915,541 + +0.8 3,915,542 - -0.9 3,915,542 - +0.5 3,915,555 + +0.5 3,915,555 + +0.4 3,915,555 + -0.1 3,915,555 + -0.2 3,915,555 + -0.1 3,915,556 - -0.3 3,915,556 - +0.1 3,915,556 - +0.5 3,915,556 - +0.6 3,915,556 - +0.9 3,915,556 - -1.4 3,915,579 - -0.1 3,915,579 - +0.1 3,915,691 - AO356_17375 0.11 +0.4 3,915,730 - AO356_17375 0.17 +0.5 3,915,761 + AO356_17375 0.22 +0.3 3,915,775 - AO356_17375 0.24 +0.6 3,915,852 + AO356_17375 0.36 +0.8 3,915,852 + AO356_17375 0.36 +0.6 3,915,852 + AO356_17375 0.36 -0.3 3,915,852 + AO356_17375 0.36 -0.1 3,915,852 + AO356_17375 0.36 +0.6 3,915,852 + AO356_17375 0.36 +0.3 3,915,852 + AO356_17375 0.36 +0.2 3,915,853 - AO356_17375 0.36 +0.7 3,915,853 - AO356_17375 0.36 -0.7 3,915,853 - AO356_17375 0.36 +1.6 3,915,853 - AO356_17375 0.36 -0.5 3,915,853 - AO356_17375 0.36 +0.5 3,915,853 - AO356_17375 0.36 +0.4 3,915,853 - AO356_17375 0.36 -0.4 3,915,853 - AO356_17375 0.36 +0.3 3,915,853 - AO356_17375 0.36 +0.3 3,915,853 - AO356_17375 0.36 -0.2 3,915,853 - AO356_17375 0.36 +0.5 3,915,853 - AO356_17375 0.36 -0.6 3,915,853 - AO356_17375 0.36 +0.1 3,915,853 - AO356_17375 0.36 +0.8 3,915,853 - AO356_17375 0.36 +0.6 3,915,853 - AO356_17375 0.36 +2.1 3,915,857 - AO356_17375 0.37 +0.5 3,915,857 - AO356_17375 0.37 +0.6 3,915,857 - AO356_17375 0.37 -0.6 3,915,857 - AO356_17375 0.37 +1.4 3,915,857 - AO356_17375 0.37 +0.7 3,915,857 - AO356_17375 0.37 -0.1 3,915,857 - AO356_17375 0.37 +0.9 3,915,857 - AO356_17375 0.37 -0.2 3,915,912 + AO356_17375 0.45 -0.1 3,915,913 - AO356_17375 0.45 +0.2 3,915,913 - AO356_17375 0.45 +0.6 3,915,965 + AO356_17375 0.53 +0.1 3,916,071 + AO356_17375 0.69 +0.0 3,916,072 - AO356_17375 0.69 +1.5 3,916,090 - AO356_17375 0.72 +0.6 3,916,090 - AO356_17375 0.72 +1.2 3,916,191 + AO356_17375 0.87 -1.3 3,916,222 + -1.5 3,916,223 - +0.6 3,916,223 - +1.3 3,916,319 + -0.6 3,916,320 - +1.5 3,916,345 - +0.2 3,916,345 - +0.8 3,916,348 + +0.5 3,916,348 + -0.7 3,916,348 + +0.5 3,916,349 - +0.3 3,916,349 - -0.7 3,916,349 - +0.9 3,916,388 + +0.5 3,916,389 - +0.8 3,916,451 + +0.2 3,916,452 - +1.1 3,916,452 - +0.9 3,916,452 - -1.1 3,916,452 - -0.5 3,916,469 + +2.5 3,916,469 + +0.1 3,916,469 + -1.2 3,916,469 + +1.6 3,916,469 + -0.6 3,916,469 + +0.2 3,916,469 + -0.2 3,916,470 - +0.3 3,916,476 + +0.2 3,916,477 - +0.5 3,916,477 - +0.6 3,916,477 - +0.1 3,916,477 - +0.6 3,916,495 - -0.9 3,916,558 - +0.7 3,916,558 - -0.2 3,916,603 + +0.8 3,916,618 + +0.1 3,916,619 - +0.2 3,916,619 - +0.5 3,916,619 - +1.0 3,916,619 - +0.1 3,916,619 - +1.2 3,916,619 - +0.2 3,916,621 + +0.3 3,916,622 - +0.3 3,916,622 - +1.1 3,916,622 - +1.6 3,916,622 - +0.5 3,916,622 - +1.2 3,916,629 + -0.2 3,916,630 - +1.7 3,916,630 - +0.2 3,916,630 - +0.7 3,916,753 + +0.6 3,916,754 - +0.8 3,916,793 - +0.2 3,916,793 - +0.6 3,916,793 - -0.5 3,916,793 - +0.4 3,917,121 + AO356_17380 0.36 +0.4 3,917,121 + AO356_17380 0.36 +1.5 3,917,121 + AO356_17380 0.36 +0.1 3,917,121 + AO356_17380 0.36 +0.1 3,917,121 + AO356_17380 0.36 -0.1 3,917,122 - AO356_17380 0.36 +0.8 3,917,122 - AO356_17380 0.36 +0.6 3,917,122 - AO356_17380 0.36 +0.5 3,917,122 - AO356_17380 0.36 +0.4 3,917,122 - AO356_17380 0.36 +0.6 3,917,122 - AO356_17380 0.36 +0.8 3,917,122 - AO356_17380 0.36 +1.5 3,917,124 + AO356_17380 0.37 +0.8 3,917,124 + AO356_17380 0.37 -0.2 3,917,124 + AO356_17380 0.37 +1.4 3,917,124 + AO356_17380 0.37 +1.3 3,917,124 + AO356_17380 0.37 +0.6 3,917,124 + AO356_17380 0.37 +1.2 3,917,124 + AO356_17380 0.37 +0.3 3,917,124 + AO356_17380 0.37 +0.1 3,917,124 + AO356_17380 0.37 +0.9 3,917,125 - AO356_17380 0.37 +0.8 3,917,125 - AO356_17380 0.37 +1.1 3,917,125 - AO356_17380 0.37 +0.1 3,917,125 - AO356_17380 0.37 +0.5 3,917,125 - AO356_17380 0.37 +0.6 3,917,125 - AO356_17380 0.37 +0.9 3,917,125 - AO356_17380 0.37 +1.6 3,917,125 - AO356_17380 0.37 +1.0 3,917,125 - AO356_17380 0.37 +1.3 3,917,125 - AO356_17380 0.37 +0.8 3,917,125 - AO356_17380 0.37 +0.6 3,917,125 - AO356_17380 0.37 +0.6 3,917,242 - AO356_17380 0.48 +0.6 3,917,265 + AO356_17380 0.50 +0.9 3,917,265 + AO356_17380 0.50 +0.4 3,917,265 + AO356_17380 0.50 +1.0 3,917,266 - AO356_17380 0.50 +0.3
Or see this region's nucleotide sequence