Strain Fitness in Methanococcus maripaludis S2 around MMP_RS09030

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,368,551	+		MMP_RS07155	0.23	+0.2
1,368,745	-		MMP_RS07155	0.40	+0.3
1,368,784	+		MMP_RS07155	0.43	+0.2
1,368,923	-		MMP_RS07155	0.55	+0.2
1,368,944	+		MMP_RS07155	0.57	+0.0
1,368,976	+		MMP_RS07155	0.60	-0.0
1,369,018	-		MMP_RS07155	0.64	+1.1
1,369,316	-		MMP_RS07155	0.89	-0.1
1,369,409	+				+0.4
1,369,431	-				-0.5
1,369,455	-				-0.4
1,369,456	+				+0.2
1,369,459	-				+0.3
1,369,459	-				-0.1
1,369,479	+				-0.0
1,369,491	-				-0.1
1,369,494	-				-0.0
1,369,495	+				+0.1
1,369,495	+				+0.3
1,369,571	+		MMP_RS09030	0.16	+0.1
1,369,646	-		MMP_RS09030	0.60	+0.2
1,369,647	+		MMP_RS09030	0.60	+0.5
1,369,647	+		MMP_RS09030	0.60	+0.1
1,369,658	-		MMP_RS09030	0.67	+0.6
1,369,659	+		MMP_RS09030	0.67	+0.2
1,369,666	+		MMP_RS09030	0.71	-0.1
1,369,669	-		MMP_RS09030	0.73	-0.1
1,369,669	-		MMP_RS09030	0.73	+0.4
1,369,669	-		MMP_RS09030	0.73	+0.1
1,369,681	-		MMP_RS09030	0.80	+0.1
1,369,728	-				-0.1
1,369,729	+				+0.1
1,369,729	+				+0.1
1,369,731	-				-0.3
1,369,736	-				+0.1
1,369,736	-				+0.5
1,369,789	-				-0.5
1,369,790	+				-0.1
1,369,790	+				-0.2
1,369,911	+				-1.4
1,369,934	+				-1.8
1,370,154	+				-4.3