Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05800

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,111,915	-		MMP_RS05795	0.19	+0.0
1,112,073	+		MMP_RS05795	0.33	-0.0
1,112,080	-		MMP_RS05795	0.33	+0.0
1,112,446	+		MMP_RS05795	0.64	-0.2
1,113,009	+				-0.6
1,113,062	+		MMP_RS05800	0.12	-0.9
1,113,120	-		MMP_RS05800	0.16	-0.1
1,113,198	+		MMP_RS05800	0.22	-0.4
1,113,198	+		MMP_RS05800	0.22	-0.9
1,113,200	+		MMP_RS05800	0.22	-0.4
1,113,203	+		MMP_RS05800	0.22	-1.1
1,113,251	-		MMP_RS05800	0.26	-0.5
1,113,295	-		MMP_RS05800	0.29	-0.8
1,113,295	-		MMP_RS05800	0.29	-0.4
1,113,295	-		MMP_RS05800	0.29	+0.1
1,113,297	-		MMP_RS05800	0.29	-0.9
1,113,297	-		MMP_RS05800	0.29	-0.0
1,113,308	-		MMP_RS05800	0.30	-0.5
1,113,338	+		MMP_RS05800	0.33	-0.4
1,113,527	-		MMP_RS05800	0.47	-0.2
1,113,658	+		MMP_RS05800	0.57	-0.8
1,113,837	-		MMP_RS05800	0.70	+0.5
1,114,104	-				-0.4
1,114,247	+				-0.6
1,114,261	-				-1.1
1,114,336	-				-0.1
1,114,396	+				-0.5
1,114,417	-				+0.0
1,114,434	+				-0.2
1,114,436	+				-0.1
1,114,461	+				-0.4
1,114,467	-				-0.2
1,114,503	-				-0.4
1,114,508	+				+0.3
1,114,512	+				+0.3
1,114,587	-				-0.9
1,114,593	-				-2.1
1,114,985	+				-2.7
1,114,985	+				-1.9
1,114,998	-				-1.1
1,115,091	-				-2.5