Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11850

Experiment: Gly-Glu 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-Glu 20 mM
2,625,107	+		LRK54_RS11840	0.57	+2.3
2,625,107	+		LRK54_RS11840	0.57	+2.1
2,625,107	+		LRK54_RS11840	0.57	+1.0
2,625,107	+		LRK54_RS11840	0.57	+1.4
2,625,107	+		LRK54_RS11840	0.57	+1.5
2,625,107	+		LRK54_RS11840	0.57	+1.9
2,625,107	+		LRK54_RS11840	0.57	+1.3
2,625,107	+		LRK54_RS11840	0.57	+1.3
2,625,107	+		LRK54_RS11840	0.57	+2.0
2,625,107	+		LRK54_RS11840	0.57	+1.1
2,625,107	+		LRK54_RS11840	0.57	+2.9
2,625,107	+		LRK54_RS11840	0.57	+2.2
2,625,107	+		LRK54_RS11840	0.57	+1.9
2,625,107	+		LRK54_RS11840	0.57	+1.5
2,625,107	+		LRK54_RS11840	0.57	+1.2
2,625,107	+		LRK54_RS11840	0.57	+1.7
2,625,107	+		LRK54_RS11840	0.57	+2.5
2,625,107	+		LRK54_RS11840	0.57	+2.7
2,625,107	+		LRK54_RS11840	0.57	+2.1
2,625,107	+		LRK54_RS11840	0.57	-0.1
2,625,108	-		LRK54_RS11840	0.58	+0.8
2,625,108	-		LRK54_RS11840	0.58	+1.9
2,625,108	-		LRK54_RS11840	0.58	+1.3
2,625,108	-		LRK54_RS11840	0.58	+1.9
2,625,108	-		LRK54_RS11840	0.58	+1.4
2,625,108	-		LRK54_RS11840	0.58	+1.1
2,625,108	-		LRK54_RS11840	0.58	+1.9
2,625,108	-		LRK54_RS11840	0.58	+1.5
2,625,108	-		LRK54_RS11840	0.58	+1.7
2,625,108	-		LRK54_RS11840	0.58	+1.7
2,625,108	-		LRK54_RS11840	0.58	+1.8
2,625,108	-		LRK54_RS11840	0.58	+1.7
2,625,108	-		LRK54_RS11840	0.58	+1.9
2,625,108	-		LRK54_RS11840	0.58	+1.6
2,625,108	-		LRK54_RS11840	0.58	+1.0
2,625,108	-		LRK54_RS11840	0.58	+0.9
2,625,108	-		LRK54_RS11840	0.58	+1.5
2,625,169	+		LRK54_RS11840	0.66	+1.9
2,625,169	+		LRK54_RS11840	0.66	+2.0
2,625,169	+		LRK54_RS11840	0.66	+1.5
2,625,170	-		LRK54_RS11840	0.66	+1.4
2,625,170	-		LRK54_RS11840	0.66	+1.8
2,625,170	-		LRK54_RS11840	0.66	+1.9
2,625,170	-		LRK54_RS11840	0.66	+1.9
2,625,175	+		LRK54_RS11840	0.67	+0.6
2,625,175	+		LRK54_RS11840	0.67	+0.9
2,625,175	+		LRK54_RS11840	0.67	+0.8
2,625,175	+		LRK54_RS11840	0.67	+2.0
2,625,175	+		LRK54_RS11840	0.67	+0.3
2,625,175	+		LRK54_RS11840	0.67	+2.3
2,625,176	-		LRK54_RS11840	0.67	+1.1
2,625,176	-		LRK54_RS11840	0.67	+1.2
2,625,176	-		LRK54_RS11840	0.67	-0.2
2,625,176	-		LRK54_RS11840	0.67	-1.1
2,625,194	+		LRK54_RS11840	0.69	+0.5
2,625,194	+		LRK54_RS11840	0.69	+1.3
2,625,194	+		LRK54_RS11840	0.69	+2.0
2,625,194	+		LRK54_RS11840	0.69	+1.8
2,625,194	+		LRK54_RS11840	0.69	+2.3
2,625,194	+		LRK54_RS11840	0.69	+2.0
2,625,194	+		LRK54_RS11840	0.69	+1.8
2,625,194	+		LRK54_RS11840	0.69	+1.5
2,625,194	+		LRK54_RS11840	0.69	+0.9
2,625,195	-		LRK54_RS11840	0.70	+1.3
2,625,195	-		LRK54_RS11840	0.70	+1.9
2,625,195	-		LRK54_RS11840	0.70	+2.4
2,625,195	-		LRK54_RS11840	0.70	+1.6
2,625,195	-		LRK54_RS11840	0.70	+2.7
2,625,195	-		LRK54_RS11840	0.70	+1.6
2,625,195	-		LRK54_RS11840	0.70	+1.2
2,625,195	-		LRK54_RS11840	0.70	+1.2
2,625,195	-		LRK54_RS11840	0.70	+1.6
2,625,429	+				+1.0
2,625,429	+				+1.8
2,625,512	+		LRK54_RS11845	0.17	+1.8
2,625,512	+		LRK54_RS11845	0.17	+2.5
2,625,512	+		LRK54_RS11845	0.17	+1.1
2,625,512	+		LRK54_RS11845	0.17	+1.7
2,625,512	+		LRK54_RS11845	0.17	+1.1
2,625,512	+		LRK54_RS11845	0.17	+1.7
2,625,513	-		LRK54_RS11845	0.17	-4.2
2,625,513	-		LRK54_RS11845	0.17	+1.8
2,625,513	-		LRK54_RS11845	0.17	+1.4
2,625,513	-		LRK54_RS11845	0.17	+1.5
2,625,513	-		LRK54_RS11845	0.17	+1.1
2,625,529	+		LRK54_RS11845	0.19	+1.5
2,625,529	+		LRK54_RS11845	0.19	+1.7
2,625,529	+		LRK54_RS11845	0.19	+1.7
2,625,529	+		LRK54_RS11845	0.19	+2.1
2,625,529	+		LRK54_RS11845	0.19	+1.9
2,625,529	+		LRK54_RS11845	0.19	+1.7
2,625,529	+		LRK54_RS11845	0.19	+2.1
2,625,529	+		LRK54_RS11845	0.19	+1.7
2,625,529	+		LRK54_RS11845	0.19	+1.4
2,625,529	+		LRK54_RS11845	0.19	+2.1
2,625,529	+		LRK54_RS11845	0.19	+1.4
2,625,529	+		LRK54_RS11845	0.19	+1.6
2,625,529	+		LRK54_RS11845	0.19	+1.7
2,625,529	+		LRK54_RS11845	0.19	+1.2
2,625,530	-		LRK54_RS11845	0.19	+1.0
2,625,530	-		LRK54_RS11845	0.19	+1.4
2,625,530	-		LRK54_RS11845	0.19	-2.0
2,625,530	-		LRK54_RS11845	0.19	+1.5
2,625,530	-		LRK54_RS11845	0.19	+1.4
2,625,530	-		LRK54_RS11845	0.19	+2.1
2,625,530	-		LRK54_RS11845	0.19	+1.2
2,625,530	-		LRK54_RS11845	0.19	+1.8
2,625,530	-		LRK54_RS11845	0.19	+1.8
2,625,530	-		LRK54_RS11845	0.19	+1.0
2,625,808	+		LRK54_RS11845	0.65	+1.7
2,625,808	+		LRK54_RS11845	0.65	+2.4
2,625,808	+		LRK54_RS11845	0.65	+1.7
2,625,808	+		LRK54_RS11845	0.65	+1.5
2,625,808	+		LRK54_RS11845	0.65	+1.5
2,625,808	+		LRK54_RS11845	0.65	+2.0
2,625,808	+		LRK54_RS11845	0.65	+1.6
2,625,808	+		LRK54_RS11845	0.65	+1.4
2,625,808	+		LRK54_RS11845	0.65	-0.3
2,625,808	+		LRK54_RS11845	0.65	+2.2
2,625,808	+		LRK54_RS11845	0.65	+2.3
2,625,809	-		LRK54_RS11845	0.66	+1.4
2,625,809	-		LRK54_RS11845	0.66	+2.2
2,625,809	-		LRK54_RS11845	0.66	+1.8
2,625,809	-		LRK54_RS11845	0.66	+1.4
2,625,809	-		LRK54_RS11845	0.66	+0.6
2,625,809	-		LRK54_RS11845	0.66	+1.5
2,625,809	-		LRK54_RS11845	0.66	+1.5
2,625,809	-		LRK54_RS11845	0.66	+1.3
2,625,809	-		LRK54_RS11845	0.66	+0.2
2,625,847	+		LRK54_RS11845	0.72	+2.0
2,625,847	+		LRK54_RS11845	0.72	+1.4
2,625,847	+		LRK54_RS11845	0.72	+1.9
2,625,847	+		LRK54_RS11845	0.72	+1.4
2,625,847	+		LRK54_RS11845	0.72	+1.7
2,625,847	+		LRK54_RS11845	0.72	+1.9
2,625,847	+		LRK54_RS11845	0.72	+1.3
2,625,847	+		LRK54_RS11845	0.72	+1.6
2,625,847	+		LRK54_RS11845	0.72	+2.2
2,625,847	+		LRK54_RS11845	0.72	+1.4
2,625,847	+		LRK54_RS11845	0.72	+1.6
2,625,847	+		LRK54_RS11845	0.72	+1.2
2,625,847	+		LRK54_RS11845	0.72	+1.1
2,625,847	+		LRK54_RS11845	0.72	+0.9
2,625,847	+		LRK54_RS11845	0.72	+1.1
2,625,847	+		LRK54_RS11845	0.72	+1.0
2,625,847	+		LRK54_RS11845	0.72	+2.1
2,625,847	+		LRK54_RS11845	0.72	+2.1
2,625,847	+		LRK54_RS11845	0.72	+1.7
2,625,847	+		LRK54_RS11845	0.72	+1.5
2,625,847	+		LRK54_RS11845	0.72	+0.6
2,625,847	+		LRK54_RS11845	0.72	+2.3
2,625,847	+		LRK54_RS11845	0.72	+1.4
2,625,847	+		LRK54_RS11845	0.72	+2.1
2,625,847	+		LRK54_RS11845	0.72	+1.0
2,625,847	+		LRK54_RS11845	0.72	+1.3
2,625,847	+		LRK54_RS11845	0.72	+1.2
2,625,847	+		LRK54_RS11845	0.72	+2.0
2,625,847	+		LRK54_RS11845	0.72	+2.2
2,625,848	-		LRK54_RS11845	0.72	+1.6
2,625,848	-		LRK54_RS11845	0.72	+1.6
2,625,848	-		LRK54_RS11845	0.72	+1.9
2,625,848	-		LRK54_RS11845	0.72	+1.8
2,625,848	-		LRK54_RS11845	0.72	+1.9
2,625,848	-		LRK54_RS11845	0.72	+2.2
2,625,848	-		LRK54_RS11845	0.72	+1.7
2,625,848	-		LRK54_RS11845	0.72	+2.5
2,625,848	-		LRK54_RS11845	0.72	+1.6
2,625,848	-		LRK54_RS11845	0.72	+1.2
2,625,848	-		LRK54_RS11845	0.72	+1.6
2,625,848	-		LRK54_RS11845	0.72	+2.1
2,625,848	-		LRK54_RS11845	0.72	+2.0
2,625,848	-		LRK54_RS11845	0.72	+2.1
2,625,848	-		LRK54_RS11845	0.72	+2.0
2,625,848	-		LRK54_RS11845	0.72	+1.8
2,625,848	-		LRK54_RS11845	0.72	+1.8
2,625,848	-		LRK54_RS11845	0.72	+1.9
2,625,848	-		LRK54_RS11845	0.72	+1.8
2,625,848	-		LRK54_RS11845	0.72	+1.9
2,625,848	-		LRK54_RS11845	0.72	+2.4
2,625,848	-		LRK54_RS11845	0.72	+1.8
2,625,848	-		LRK54_RS11845	0.72	+1.8
2,625,848	-		LRK54_RS11845	0.72	-0.0
2,625,848	-		LRK54_RS11845	0.72	+1.7
2,625,848	-		LRK54_RS11845	0.72	+1.7
2,625,848	-		LRK54_RS11845	0.72	+2.1
2,625,848	-		LRK54_RS11845	0.72	+1.6
2,625,848	-		LRK54_RS11845	0.72	+0.1
2,625,984	+				+2.3
2,625,984	+				+2.2
2,625,984	+				+1.7
2,625,984	+				+1.9
2,625,984	+				+2.0
2,625,984	+				+2.0
2,625,985	-				+2.1
2,625,985	-				+2.0
2,625,985	-				+1.7
2,625,985	-				+1.7
2,625,985	-				-0.8
2,625,997	+				+1.5
2,625,997	+				+1.8
2,625,997	+				+1.5
2,625,997	+				+1.8
2,625,997	+				+1.8
2,625,997	+				+1.6
2,625,997	+				+0.8
2,625,997	+				+0.0
2,625,998	-				+2.5
2,625,998	-				+1.3
2,625,998	-				+1.4
2,625,998	-				+1.1
2,625,998	-				+2.3
2,625,998	-				+3.6
2,625,998	-				+3.2
2,625,998	-				+2.4
2,625,998	-				+0.7
2,626,004	-				+0.8
2,626,004	-				+1.3
2,626,249	+		LRK54_RS11850	0.34	+1.6
2,626,249	+		LRK54_RS11850	0.34	+1.5
2,626,249	+		LRK54_RS11850	0.34	+1.7
2,626,249	+		LRK54_RS11850	0.34	+1.4
2,626,249	+		LRK54_RS11850	0.34	+0.8
2,626,249	+		LRK54_RS11850	0.34	+1.9
2,626,249	+		LRK54_RS11850	0.34	+1.5
2,626,250	-		LRK54_RS11850	0.34	+2.1
2,626,250	-		LRK54_RS11850	0.34	+3.0
2,626,250	-		LRK54_RS11850	0.34	+0.6
2,626,250	-		LRK54_RS11850	0.34	+0.1
2,626,250	-		LRK54_RS11850	0.34	+1.5
2,626,250	-		LRK54_RS11850	0.34	+1.8
2,626,250	-		LRK54_RS11850	0.34	+0.9
2,626,250	-		LRK54_RS11850	0.34	+1.3
2,626,253	+		LRK54_RS11850	0.35	+1.5
2,626,253	+		LRK54_RS11850	0.35	+1.8
2,626,253	+		LRK54_RS11850	0.35	+1.9
2,626,253	+		LRK54_RS11850	0.35	+0.6
2,626,253	+		LRK54_RS11850	0.35	+1.8
2,626,253	+		LRK54_RS11850	0.35	+1.6
2,626,253	+		LRK54_RS11850	0.35	+1.5
2,626,253	+		LRK54_RS11850	0.35	+1.3
2,626,254	-		LRK54_RS11850	0.35	+1.0
2,626,254	-		LRK54_RS11850	0.35	+0.8
2,626,254	-		LRK54_RS11850	0.35	-0.5
2,626,254	-		LRK54_RS11850	0.35	+2.2
2,626,254	-		LRK54_RS11850	0.35	+0.5
2,626,254	-		LRK54_RS11850	0.35	+1.2
2,626,254	-		LRK54_RS11850	0.35	+1.4
2,626,254	-		LRK54_RS11850	0.35	+1.6
2,626,254	-		LRK54_RS11850	0.35	+2.3
2,626,254	-		LRK54_RS11850	0.35	+2.0
2,626,254	-		LRK54_RS11850	0.35	+1.6
2,626,254	-		LRK54_RS11850	0.35	+1.7
2,626,478	+		LRK54_RS11850	0.76	+2.4
2,626,478	+		LRK54_RS11850	0.76	+1.4
2,626,478	+		LRK54_RS11850	0.76	+3.0
2,626,478	+		LRK54_RS11850	0.76	+2.2
2,626,478	+		LRK54_RS11850	0.76	+1.4
2,626,478	+		LRK54_RS11850	0.76	+0.0
2,626,478	+		LRK54_RS11850	0.76	+1.5
2,626,478	+		LRK54_RS11850	0.76	+2.1
2,626,478	+		LRK54_RS11850	0.76	+1.0
2,626,478	+		LRK54_RS11850	0.76	+2.4
2,626,478	+		LRK54_RS11850	0.76	+2.5
2,626,478	+		LRK54_RS11850	0.76	+1.8
2,626,478	+		LRK54_RS11850	0.76	+2.0
2,626,478	+		LRK54_RS11850	0.76	+2.9
2,626,478	+		LRK54_RS11850	0.76	+1.0
2,626,478	+		LRK54_RS11850	0.76	+1.1
2,626,478	+		LRK54_RS11850	0.76	+0.9
2,626,478	+		LRK54_RS11850	0.76	+2.0
2,626,478	+		LRK54_RS11850	0.76	+1.9
2,626,478	+		LRK54_RS11850	0.76	+2.9
2,626,478	+		LRK54_RS11850	0.76	+1.6
2,626,478	+		LRK54_RS11850	0.76	+1.4
2,626,478	+		LRK54_RS11850	0.76	+1.0
2,626,478	+		LRK54_RS11850	0.76	+0.7
2,626,478	+		LRK54_RS11850	0.76	+1.6
2,626,478	+		LRK54_RS11850	0.76	+1.3
2,626,478	+		LRK54_RS11850	0.76	+1.6
2,626,478	+		LRK54_RS11850	0.76	+1.6
2,626,478	+		LRK54_RS11850	0.76	+2.2
2,626,478	+		LRK54_RS11850	0.76	+1.9
2,626,478	+		LRK54_RS11850	0.76	-0.7
2,626,478	+		LRK54_RS11850	0.76	+1.5
2,626,478	+		LRK54_RS11850	0.76	-0.1
2,626,478	+		LRK54_RS11850	0.76	+1.4
2,626,478	+		LRK54_RS11850	0.76	+1.7
2,626,478	+		LRK54_RS11850	0.76	+1.4
2,626,479	-		LRK54_RS11850	0.76	+1.1
2,626,479	-		LRK54_RS11850	0.76	+1.1
2,626,479	-		LRK54_RS11850	0.76	+1.2
2,626,479	-		LRK54_RS11850	0.76	+2.0
2,626,479	-		LRK54_RS11850	0.76	+1.7
2,626,479	-		LRK54_RS11850	0.76	+2.0
2,626,479	-		LRK54_RS11850	0.76	+0.7
2,626,479	-		LRK54_RS11850	0.76	-2.0
2,626,479	-		LRK54_RS11850	0.76	+1.3
2,626,479	-		LRK54_RS11850	0.76	-1.5
2,626,479	-		LRK54_RS11850	0.76	+0.7
2,626,479	-		LRK54_RS11850	0.76	+0.8
2,626,479	-		LRK54_RS11850	0.76	+1.6
2,626,479	-		LRK54_RS11850	0.76	+1.5
2,626,479	-		LRK54_RS11850	0.76	+0.9
2,626,479	-		LRK54_RS11850	0.76	-0.1
2,626,479	-		LRK54_RS11850	0.76	+1.3
2,626,479	-		LRK54_RS11850	0.76	+1.8
2,626,479	-		LRK54_RS11850	0.76	+1.8
2,626,479	-		LRK54_RS11850	0.76	+1.6
2,626,479	-		LRK54_RS11850	0.76	+1.6
2,626,479	-		LRK54_RS11850	0.76	+1.5
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