Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11815

Experiment: Gly-Glu 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-Glu 20 mM
2,617,266	+				-1.0
2,617,266	+				-2.5
2,617,266	+				-1.9
2,617,267	-				-0.5
2,617,267	-				-2.1
2,617,267	-				-0.5
2,617,267	-				+0.1
2,617,267	-				-0.3
2,617,267	-				-1.5
2,617,295	+		LRK54_RS11810	0.10	-0.3
2,617,295	+		LRK54_RS11810	0.10	+0.3
2,617,296	-		LRK54_RS11810	0.11	+0.7
2,617,876	-		LRK54_RS11810	0.73	+0.5
2,617,876	-		LRK54_RS11810	0.73	-0.7
2,617,876	-		LRK54_RS11810	0.73	-0.1
2,617,876	-		LRK54_RS11810	0.73	+1.1
2,617,876	-		LRK54_RS11810	0.73	-2.0
2,617,876	-		LRK54_RS11810	0.73	+0.8
2,617,876	-		LRK54_RS11810	0.73	+0.3
2,617,876	-		LRK54_RS11810	0.73	+0.5
2,617,876	-		LRK54_RS11810	0.73	-1.0
2,617,876	-		LRK54_RS11810	0.73	+0.8
2,618,434	+				+1.6
2,618,455	+				-0.7
2,618,455	+				-0.7
2,618,455	+				-0.0
2,618,455	+				-0.9
2,618,455	+				+1.2
2,618,455	+				+2.1
2,618,455	+				-1.1
2,618,455	+				-0.4
2,618,455	+				-0.0
2,618,455	+				-0.7
2,618,455	+				-0.2
2,618,455	+				-0.6
2,618,455	+				-0.8
2,618,455	+				-1.9
2,618,455	+				-1.0
2,618,455	+				+1.4
2,618,455	+				-0.4
2,618,455	+				-0.7
2,618,456	-				+0.3
2,618,456	-				+1.0
2,618,456	-				+0.2
2,618,456	-				-0.4
2,618,456	-				-0.3
2,618,456	-				-0.3
2,618,456	-				+0.5
2,618,456	-				+0.2
2,618,456	-				+0.3
2,618,456	-				-1.5
2,618,456	-				+0.0
2,618,456	-				-0.5
2,618,456	-				-2.0
2,618,456	-				+0.8
2,618,456	-				-1.2
2,618,456	-				-1.0
2,618,595	+				-0.2
2,618,720	+				+2.0
2,618,720	+				+1.6
2,618,720	+				-1.3
2,618,720	+				+0.8
2,618,720	+				+2.8
2,618,720	+				-2.1
2,618,720	+				+0.3
2,618,720	+				+1.4
2,618,720	+				-0.3
2,618,720	+				-0.1
2,618,720	+				+0.8
2,618,720	+				+1.0
2,618,720	+				+1.3
2,618,720	+				+0.0
2,618,720	+				+0.3
2,618,720	+				+0.3
2,618,720	+				+0.8
2,618,720	+				+0.5
2,618,720	+				-1.9
2,618,720	+				+0.9
2,618,720	+				+1.2
2,618,720	+				-0.5
2,618,720	+				+1.0
2,618,720	+				+0.5
2,618,720	+				+0.1
2,618,720	+				+1.0
2,618,720	+				-0.9
2,618,720	+				-0.2
2,618,720	+				-1.9
2,618,720	+				+0.8
2,618,720	+				+0.2
2,618,720	+				+1.0
2,618,720	+				-0.5
2,618,720	+				+0.2
2,618,720	+				+0.1
2,618,720	+				+0.0
2,618,720	+				+0.4
2,618,720	+				-2.7
2,618,720	+				+0.7
2,618,720	+				+0.2
2,618,720	+				-1.1
2,618,720	+				+1.7
2,618,720	+				+0.3
2,618,720	+				+0.1
2,618,720	+				+0.7
2,618,720	+				-0.2
2,618,720	+				-0.6
2,618,720	+				+0.8
2,618,720	+				+0.4
2,618,720	+				+0.8
2,618,720	+				-1.9
2,618,720	+				-0.7
2,618,720	+				+1.8
2,618,720	+				+1.0
2,618,720	+				+2.3
2,618,720	+				+0.8
2,618,720	+				+0.4
2,618,720	+				-0.3
2,618,720	+				+0.6
2,618,720	+				-1.6
2,618,720	+				-0.7
2,618,720	+				+0.3
2,618,720	+				-1.2
2,618,720	+				+1.6
2,618,720	+				+0.7
2,618,720	+				+1.4
2,618,720	+				-0.3
2,618,720	+				+0.4
2,618,721	-				+2.8
2,618,721	-				+2.7
2,618,721	-				+1.9
2,618,721	-				+3.5
2,618,721	-				+2.3
2,618,721	-				+3.3
2,618,721	-				+3.4
2,618,721	-				-0.2
2,618,721	-				+2.8
2,618,721	-				+0.1
2,618,721	-				+1.0
2,618,721	-				+1.2
2,618,721	-				+2.6
2,618,721	-				+3.0
2,618,721	-				+3.0
2,618,721	-				+4.4
2,618,721	-				+1.8
2,618,721	-				+2.8
2,618,721	-				+2.2
2,618,721	-				+3.5
2,618,721	-				+2.5
2,618,721	-				+2.5
2,618,721	-				+1.8
2,618,721	-				+3.5
2,618,721	-				+3.8
2,618,721	-				+2.9
2,618,721	-				+2.7
2,618,721	-				+3.7
2,618,721	-				+2.8
2,618,721	-				+2.5
2,618,721	-				+2.1
2,618,721	-				+3.0
2,618,721	-				+3.9
2,618,721	-				+0.0
2,618,721	-				+1.8
2,618,721	-				+3.5
2,618,721	-				+3.9
2,618,721	-				+4.0
2,618,721	-				+0.3
2,618,721	-				+2.2
2,618,721	-				+1.8
2,618,721	-				+2.6
2,618,721	-				+1.7
2,618,721	-				+2.4
2,618,721	-				+2.8
2,618,721	-				+3.7
2,618,721	-				+2.6
2,618,721	-				+2.6
2,618,721	-				+2.0
2,618,721	-				+2.0
2,618,721	-				+3.3
2,618,721	-				+0.7
2,618,721	-				+2.3
2,618,721	-				+1.8
2,618,721	-				+2.9
2,618,721	-				+1.4
2,618,721	-				+3.5
2,618,721	-				+2.5
2,618,721	-				+2.2
2,618,844	+				+1.6
2,618,844	+				+3.1
2,618,844	+				+1.3
2,618,844	+				+2.0
2,618,844	+				+2.0
2,618,844	+				+2.8
2,618,844	+				+2.6
2,618,844	+				+0.8
2,618,844	+				+2.5
2,618,844	+				+2.2
2,618,844	+				+2.8
2,618,845	-				+2.1
2,618,845	-				+3.6
2,618,845	-				+2.3
2,618,845	-				+2.7
2,618,845	-				+3.1
2,618,845	-				+2.2
2,618,845	-				+3.6
2,618,868	+		LRK54_RS11820	0.10	+2.7
2,618,868	+		LRK54_RS11820	0.10	+2.2
2,618,868	+		LRK54_RS11820	0.10	+2.5
2,618,868	+		LRK54_RS11820	0.10	+3.1
2,618,868	+		LRK54_RS11820	0.10	+3.4
2,618,868	+		LRK54_RS11820	0.10	+3.0
2,618,868	+		LRK54_RS11820	0.10	+3.4
2,618,868	+		LRK54_RS11820	0.10	+2.3
2,618,868	+		LRK54_RS11820	0.10	+1.3
2,618,868	+		LRK54_RS11820	0.10	+2.8
2,618,868	+		LRK54_RS11820	0.10	+1.8
2,618,868	+		LRK54_RS11820	0.10	+1.8
2,618,868	+		LRK54_RS11820	0.10	+1.8
2,618,868	+		LRK54_RS11820	0.10	+3.0
2,618,868	+		LRK54_RS11820	0.10	+1.5
2,618,868	+		LRK54_RS11820	0.10	+1.9
2,618,868	+		LRK54_RS11820	0.10	+2.2
2,618,869	-		LRK54_RS11820	0.10	+2.6
2,618,869	-		LRK54_RS11820	0.10	+3.3
2,618,869	-		LRK54_RS11820	0.10	+1.8
2,618,869	-		LRK54_RS11820	0.10	+0.8
2,618,869	-		LRK54_RS11820	0.10	+3.0
2,618,869	-		LRK54_RS11820	0.10	+3.4
2,618,869	-		LRK54_RS11820	0.10	+0.3
2,618,869	-		LRK54_RS11820	0.10	+2.4
2,618,869	-		LRK54_RS11820	0.10	+3.0
2,618,869	-		LRK54_RS11820	0.10	+2.5
2,618,869	-		LRK54_RS11820	0.10	+4.1
2,618,869	-		LRK54_RS11820	0.10	+4.0
2,618,869	-		LRK54_RS11820	0.10	+1.1
2,618,869	-		LRK54_RS11820	0.10	+3.1
2,618,869	-		LRK54_RS11820	0.10	+2.5
2,618,880	+		LRK54_RS11820	0.11	+2.5
2,618,916	+		LRK54_RS11820	0.14	+2.6
2,618,916	+		LRK54_RS11820	0.14	+3.2
2,618,916	+		LRK54_RS11820	0.14	+3.1
2,618,916	+		LRK54_RS11820	0.14	+2.6
2,618,916	+		LRK54_RS11820	0.14	+0.8
2,618,916	+		LRK54_RS11820	0.14	+2.3
2,618,916	+		LRK54_RS11820	0.14	+2.0
2,618,916	+		LRK54_RS11820	0.14	+3.7
2,618,916	+		LRK54_RS11820	0.14	+2.9
2,618,916	+		LRK54_RS11820	0.14	+1.0
2,618,916	+		LRK54_RS11820	0.14	+2.7
2,618,916	+		LRK54_RS11820	0.14	+2.3
2,618,916	+		LRK54_RS11820	0.14	+2.6
2,618,916	+		LRK54_RS11820	0.14	+3.2
2,618,916	+		LRK54_RS11820	0.14	+3.0
2,618,916	+		LRK54_RS11820	0.14	+2.4
2,618,916	+		LRK54_RS11820	0.14	+3.0
2,618,916	+		LRK54_RS11820	0.14	+2.9
2,618,916	+		LRK54_RS11820	0.14	+2.9
2,618,916	+		LRK54_RS11820	0.14	+1.8
2,618,917	-		LRK54_RS11820	0.14	+3.9
2,618,917	-		LRK54_RS11820	0.14	+1.8
2,618,917	-		LRK54_RS11820	0.14	+0.8
2,618,917	-		LRK54_RS11820	0.14	+2.0
2,618,917	-		LRK54_RS11820	0.14	+2.0
2,618,917	-		LRK54_RS11820	0.14	+2.7
2,618,917	-		LRK54_RS11820	0.14	+2.0
2,618,917	-		LRK54_RS11820	0.14	+2.9
2,618,917	-		LRK54_RS11820	0.14	+1.0
2,618,917	-		LRK54_RS11820	0.14	+2.5
2,618,917	-		LRK54_RS11820	0.14	+1.8
2,618,946	+		LRK54_RS11820	0.16	+3.3
2,618,946	+		LRK54_RS11820	0.16	+2.5
2,618,947	-		LRK54_RS11820	0.17	+2.7
2,619,003	+		LRK54_RS11820	0.21	+2.3
2,619,003	+		LRK54_RS11820	0.21	+1.7
2,619,003	+		LRK54_RS11820	0.21	+1.4
2,619,003	+		LRK54_RS11820	0.21	+3.5
2,619,003	+		LRK54_RS11820	0.21	+0.4
2,619,003	+		LRK54_RS11820	0.21	+1.8
2,619,004	-		LRK54_RS11820	0.21	+3.4
2,619,004	-		LRK54_RS11820	0.21	+2.6
2,619,004	-		LRK54_RS11820	0.21	+3.4
2,619,004	-		LRK54_RS11820	0.21	+2.4
2,619,004	-		LRK54_RS11820	0.21	+2.2
2,619,004	-		LRK54_RS11820	0.21	+3.7
2,619,177	+		LRK54_RS11820	0.34	+0.5
2,619,177	+		LRK54_RS11820	0.34	+0.3
2,619,177	+		LRK54_RS11820	0.34	+2.8
2,619,177	+		LRK54_RS11820	0.34	+3.4
2,619,177	+		LRK54_RS11820	0.34	+2.8
2,619,177	+		LRK54_RS11820	0.34	+3.4
2,619,177	+		LRK54_RS11820	0.34	+3.3
2,619,177	+		LRK54_RS11820	0.34	+1.8
2,619,177	+		LRK54_RS11820	0.34	+2.8
2,619,177	+		LRK54_RS11820	0.34	+3.0
2,619,177	+		LRK54_RS11820	0.34	+2.5
2,619,178	-		LRK54_RS11820	0.34	+3.1
2,619,178	-		LRK54_RS11820	0.34	+2.4
2,619,178	-		LRK54_RS11820	0.34	+3.4
2,619,178	-		LRK54_RS11820	0.34	+3.5
2,619,178	-		LRK54_RS11820	0.34	+2.2
2,619,178	-		LRK54_RS11820	0.34	+2.6
2,619,178	-		LRK54_RS11820	0.34	+3.2
2,619,178	-		LRK54_RS11820	0.34	+1.8
2,619,178	-		LRK54_RS11820	0.34	+1.5
2,619,178	-		LRK54_RS11820	0.34	+2.7
2,619,270	+		LRK54_RS11820	0.41	+1.8
2,619,276	+		LRK54_RS11820	0.42	+2.1
2,619,277	-		LRK54_RS11820	0.42	+2.3
2,619,277	-		LRK54_RS11820	0.42	+3.1
2,619,321	+		LRK54_RS11820	0.45	+2.4
2,619,321	+		LRK54_RS11820	0.45	+3.8
2,619,321	+		LRK54_RS11820	0.45	+2.4
2,619,322	-		LRK54_RS11820	0.45	+1.3
2,619,322	-		LRK54_RS11820	0.45	+3.4
2,619,322	-		LRK54_RS11820	0.45	+2.3
2,619,322	-		LRK54_RS11820	0.45	+0.3
2,619,322	-		LRK54_RS11820	0.45	+2.3
2,619,322	-		LRK54_RS11820	0.45	+2.6
2,619,359	+		LRK54_RS11820	0.48	+2.3