Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10690

Experiment: Gly-Glu 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-Glu 20 mM
2,363,970	+		LRK54_RS10685	0.37	-2.0
2,363,970	+		LRK54_RS10685	0.37	-3.1
2,363,970	+		LRK54_RS10685	0.37	-0.7
2,363,971	-		LRK54_RS10685	0.37	-2.8
2,363,971	-		LRK54_RS10685	0.37	-0.5
2,363,971	-		LRK54_RS10685	0.37	-2.4
2,363,976	+		LRK54_RS10685	0.38	-1.5
2,363,976	+		LRK54_RS10685	0.38	+0.5
2,363,976	+		LRK54_RS10685	0.38	-2.1
2,363,976	+		LRK54_RS10685	0.38	-0.1
2,363,976	+		LRK54_RS10685	0.38	+0.5
2,363,976	+		LRK54_RS10685	0.38	-1.8
2,363,976	+		LRK54_RS10685	0.38	-1.0
2,363,976	+		LRK54_RS10685	0.38	-2.0
2,363,976	+		LRK54_RS10685	0.38	-1.2
2,363,976	+		LRK54_RS10685	0.38	-2.3
2,363,977	-		LRK54_RS10685	0.38	-3.5
2,363,977	-		LRK54_RS10685	0.38	+0.5
2,363,977	-		LRK54_RS10685	0.38	-0.8
2,363,977	-		LRK54_RS10685	0.38	-1.6
2,363,977	-		LRK54_RS10685	0.38	-0.7
2,363,977	-		LRK54_RS10685	0.38	-0.2
2,363,977	-		LRK54_RS10685	0.38	-0.0
2,363,979	+		LRK54_RS10685	0.38	-2.6
2,363,979	+		LRK54_RS10685	0.38	-0.5
2,363,979	+		LRK54_RS10685	0.38	-1.8
2,363,979	+		LRK54_RS10685	0.38	-1.9
2,363,979	+		LRK54_RS10685	0.38	+0.5
2,363,979	+		LRK54_RS10685	0.38	-0.8
2,363,979	+		LRK54_RS10685	0.38	-1.6
2,363,980	-		LRK54_RS10685	0.38	-2.3
2,363,980	-		LRK54_RS10685	0.38	-1.5
2,363,980	-		LRK54_RS10685	0.38	-2.5
2,363,980	-		LRK54_RS10685	0.38	-1.1
2,363,980	-		LRK54_RS10685	0.38	-0.2
2,363,980	-		LRK54_RS10685	0.38	-2.0
2,363,980	-		LRK54_RS10685	0.38	-1.3
2,363,980	-		LRK54_RS10685	0.38	-1.8
2,363,980	-		LRK54_RS10685	0.38	-3.5
2,363,980	-		LRK54_RS10685	0.38	-1.5
2,363,980	-		LRK54_RS10685	0.38	+0.8
2,363,980	-		LRK54_RS10685	0.38	-1.9
2,364,055	+		LRK54_RS10685	0.44	-2.7
2,364,055	+		LRK54_RS10685	0.44	-2.3
2,364,055	+		LRK54_RS10685	0.44	-1.6
2,364,055	+		LRK54_RS10685	0.44	-1.3
2,364,055	+		LRK54_RS10685	0.44	-1.9
2,364,055	+		LRK54_RS10685	0.44	-0.5
2,364,055	+		LRK54_RS10685	0.44	-1.8
2,364,055	+		LRK54_RS10685	0.44	-2.8
2,364,056	-		LRK54_RS10685	0.44	+1.2
2,364,056	-		LRK54_RS10685	0.44	-1.2
2,364,056	-		LRK54_RS10685	0.44	-1.3
2,364,056	-		LRK54_RS10685	0.44	-1.6
2,364,056	-		LRK54_RS10685	0.44	-2.6
2,364,056	-		LRK54_RS10685	0.44	+0.2
2,364,056	-		LRK54_RS10685	0.44	-1.2
2,364,056	-		LRK54_RS10685	0.44	-1.2
2,364,171	+		LRK54_RS10685	0.54	-1.8
2,364,171	+		LRK54_RS10685	0.54	-1.6
2,364,171	+		LRK54_RS10685	0.54	-1.1
2,364,171	+		LRK54_RS10685	0.54	-0.8
2,364,171	+		LRK54_RS10685	0.54	-0.8
2,364,171	+		LRK54_RS10685	0.54	-0.8
2,364,172	-		LRK54_RS10685	0.54	-0.5
2,364,172	-		LRK54_RS10685	0.54	-0.5
2,364,172	-		LRK54_RS10685	0.54	-0.2
2,364,172	-		LRK54_RS10685	0.54	-1.8
2,364,172	-		LRK54_RS10685	0.54	-1.6
2,364,172	-		LRK54_RS10685	0.54	-0.8
2,364,172	-		LRK54_RS10685	0.54	-3.1
2,364,264	+		LRK54_RS10685	0.62	-1.3
2,364,264	+		LRK54_RS10685	0.62	+0.6
2,364,265	-		LRK54_RS10685	0.62	+1.8
2,364,265	-		LRK54_RS10685	0.62	-1.9
2,364,265	-		LRK54_RS10685	0.62	-1.2
2,364,265	-		LRK54_RS10685	0.62	-1.9
2,364,265	-		LRK54_RS10685	0.62	-0.8
2,364,285	+		LRK54_RS10685	0.63	-2.1
2,364,285	+		LRK54_RS10685	0.63	-1.0
2,364,286	-		LRK54_RS10685	0.63	+1.8
2,364,286	-		LRK54_RS10685	0.63	-0.6
2,364,286	-		LRK54_RS10685	0.63	-2.8
2,364,381	+		LRK54_RS10685	0.71	-1.6
2,364,381	+		LRK54_RS10685	0.71	+0.2
2,364,381	+		LRK54_RS10685	0.71	-1.3
2,364,381	+		LRK54_RS10685	0.71	-1.2
2,364,381	+		LRK54_RS10685	0.71	-0.2
2,364,381	+		LRK54_RS10685	0.71	-1.8
2,364,381	+		LRK54_RS10685	0.71	-1.0
2,364,381	+		LRK54_RS10685	0.71	-2.0
2,364,381	+		LRK54_RS10685	0.71	-1.8
2,364,381	+		LRK54_RS10685	0.71	-2.2
2,364,381	+		LRK54_RS10685	0.71	-1.8
2,364,381	+		LRK54_RS10685	0.71	-2.3
2,364,381	+		LRK54_RS10685	0.71	-0.5
2,364,381	+		LRK54_RS10685	0.71	-2.1
2,364,381	+		LRK54_RS10685	0.71	-0.5
2,364,381	+		LRK54_RS10685	0.71	-1.3
2,364,381	+		LRK54_RS10685	0.71	-0.7
2,364,381	+		LRK54_RS10685	0.71	-2.8
2,364,381	+		LRK54_RS10685	0.71	-1.5
2,364,381	+		LRK54_RS10685	0.71	-1.2
2,364,381	+		LRK54_RS10685	0.71	-1.9
2,364,381	+		LRK54_RS10685	0.71	-0.9
2,364,381	+		LRK54_RS10685	0.71	+0.8
2,364,381	+		LRK54_RS10685	0.71	-0.5
2,364,381	+		LRK54_RS10685	0.71	-2.4
2,364,382	-		LRK54_RS10685	0.71	-1.2
2,364,382	-		LRK54_RS10685	0.71	+0.5
2,364,382	-		LRK54_RS10685	0.71	+0.0
2,364,382	-		LRK54_RS10685	0.71	-1.5
2,364,382	-		LRK54_RS10685	0.71	-2.1
2,364,382	-		LRK54_RS10685	0.71	-1.0
2,364,382	-		LRK54_RS10685	0.71	-1.8
2,364,382	-		LRK54_RS10685	0.71	-0.8
2,364,382	-		LRK54_RS10685	0.71	-0.6
2,364,382	-		LRK54_RS10685	0.71	-2.1
2,364,382	-		LRK54_RS10685	0.71	-1.3
2,364,382	-		LRK54_RS10685	0.71	-2.5
2,364,382	-		LRK54_RS10685	0.71	-2.1
2,364,579	+		LRK54_RS10685	0.88	-2.3
2,364,579	+		LRK54_RS10685	0.88	-1.3
2,364,579	+		LRK54_RS10685	0.88	+0.2
2,364,579	+		LRK54_RS10685	0.88	-1.6
2,364,579	+		LRK54_RS10685	0.88	-3.2
2,364,579	+		LRK54_RS10685	0.88	-1.9
2,364,579	+		LRK54_RS10685	0.88	-0.8
2,364,580	-		LRK54_RS10685	0.88	-1.9
2,364,580	-		LRK54_RS10685	0.88	-0.5
2,364,580	-		LRK54_RS10685	0.88	+0.1
2,364,625	-				-0.5
2,364,633	+				-1.9
2,364,633	+				+0.2
2,364,633	+				-2.0
2,364,633	+				-1.0
2,364,633	+				+0.2
2,364,633	+				-1.5
2,364,633	+				+0.4
2,364,633	+				-2.5
2,364,633	+				-1.8
2,364,634	-				-2.2
2,364,634	-				-1.6
2,364,634	-				-1.9
2,364,634	-				-0.8
2,364,634	-				-2.7
2,364,634	-				-1.0
2,364,634	-				-2.7
2,364,634	-				-0.6
2,364,634	-				-2.1
2,364,634	-				-2.3
2,364,634	-				-0.5
2,365,720	+				-0.2
2,365,721	-				+0.0
2,365,721	-				-0.5
2,365,721	-				+0.8
2,365,764	+				-0.6
2,365,764	+				-2.6
2,365,764	+				-0.2
2,365,764	+				-2.2
2,365,764	+				-0.0
2,365,764	+				-0.6
2,365,764	+				-0.3
2,365,764	+				+0.1
2,365,764	+				-0.2
2,365,765	-				-0.1
2,365,765	-				-0.8
2,365,765	-				+1.6
2,365,765	-				+0.8
2,365,765	-				+0.1
2,365,765	-				+0.5
2,365,765	-				+1.8
2,365,976	+		LRK54_RS10695	0.18	+0.7
2,365,976	+		LRK54_RS10695	0.18	+2.2
2,365,976	+		LRK54_RS10695	0.18	-0.2
2,365,977	-		LRK54_RS10695	0.18	+1.8
2,365,977	-		LRK54_RS10695	0.18	-1.0
2,365,977	-		LRK54_RS10695	0.18	+0.7
2,365,977	-		LRK54_RS10695	0.18	-1.3
2,365,977	-		LRK54_RS10695	0.18	+1.0
2,365,977	-		LRK54_RS10695	0.18	+0.2
2,365,977	-		LRK54_RS10695	0.18	+1.8
2,366,159	+		LRK54_RS10695	0.41	+0.2
2,366,303	+		LRK54_RS10695	0.60	+0.9
2,366,303	+		LRK54_RS10695	0.60	-0.4
2,366,303	+		LRK54_RS10695	0.60	+0.6
2,366,303	+		LRK54_RS10695	0.60	+2.2
2,366,303	+		LRK54_RS10695	0.60	-0.1
2,366,304	-		LRK54_RS10695	0.60	-1.8
2,366,304	-		LRK54_RS10695	0.60	-1.2
2,366,304	-		LRK54_RS10695	0.60	-1.2
2,366,304	-		LRK54_RS10695	0.60	+2.1
2,366,304	-		LRK54_RS10695	0.60	+0.6
2,366,438	+		LRK54_RS10695	0.77	-0.8
2,366,438	+		LRK54_RS10695	0.77	+1.8
2,366,438	+		LRK54_RS10695	0.77	+0.8
2,366,438	+		LRK54_RS10695	0.77	+1.6
2,366,438	+		LRK54_RS10695	0.77	+0.4
2,366,439	-		LRK54_RS10695	0.78	+0.0
2,366,439	-		LRK54_RS10695	0.78	+0.7
2,366,439	-		LRK54_RS10695	0.78	+0.1
2,366,439	-		LRK54_RS10695	0.78	+0.2
2,366,439	-		LRK54_RS10695	0.78	+0.5
2,366,439	-		LRK54_RS10695	0.78	+1.2
2,366,472	+		LRK54_RS10695	0.82	+2.2
2,366,472	+		LRK54_RS10695	0.82	+0.8
2,366,472	+		LRK54_RS10695	0.82	+2.1
2,366,472	+		LRK54_RS10695	0.82	+0.9
2,366,472	+		LRK54_RS10695	0.82	+0.2
2,366,472	+		LRK54_RS10695	0.82	-0.3
2,366,472	+		LRK54_RS10695	0.82	-0.2
2,366,472	+		LRK54_RS10695	0.82	-1.0
2,366,472	+		LRK54_RS10695	0.82	+0.3
2,366,472	+		LRK54_RS10695	0.82	+2.4
2,366,472	+		LRK54_RS10695	0.82	-1.3
2,366,472	+		LRK54_RS10695	0.82	+0.1
2,366,473	-		LRK54_RS10695	0.82	+0.2
2,366,473	-		LRK54_RS10695	0.82	+1.6
2,366,473	-		LRK54_RS10695	0.82	-0.4
2,366,473	-		LRK54_RS10695	0.82	+1.6
2,366,473	-		LRK54_RS10695	0.82	+0.0
2,366,473	-		LRK54_RS10695	0.82	-0.3
2,366,473	-		LRK54_RS10695	0.82	-0.6
2,366,473	-		LRK54_RS10695	0.82	+0.2
2,366,473	-		LRK54_RS10695	0.82	+0.8
2,366,473	-		LRK54_RS10695	0.82	+0.6
2,366,473	-		LRK54_RS10695	0.82	+0.0
2,366,473	-		LRK54_RS10695	0.82	-0.5
2,366,655	+				-1.0
2,366,655	+				-1.0
2,366,655	+				+0.0
2,366,655	+				+0.4
2,366,655	+				-1.9
2,366,655	+				-0.0
2,366,655	+				+0.1
2,366,655	+				+0.4
2,366,655	+				-1.5
2,366,655	+				-0.0
2,366,655	+				-3.4
2,366,655	+				-0.1
2,366,655	+				+0.2
2,366,655	+				+0.2
2,366,655	+				+1.1
2,366,655	+				-2.3
2,366,655	+				+0.2
2,366,655	+				+0.0
2,366,655	+				+1.2
2,366,655	+				-0.8
2,366,655	+				-2.8
2,366,655	+				+0.3
2,366,655	+				-0.9
2,366,656	-				-0.3
2,366,656	-				-1.8
2,366,656	-				-0.2
2,366,656	-				-0.8
2,366,656	-				-0.4
2,366,656	-				-0.1
2,366,656	-				-0.5
2,366,656	-				+0.8
2,366,656	-				-0.9
2,366,656	-				-1.2
2,366,656	-				-2.0
2,366,656	-				+1.2
2,366,656	-				-0.2
2,366,656	-				+1.0
2,366,656	-				-1.4
2,366,656	-				+0.2
2,366,656	-				+0.3
2,366,656	-				-1.3
2,366,656	-				-0.1
2,366,656	-				-1.1
2,366,656	-				-0.2
2,366,656	-				+0.6
2,366,656	-				-0.7
2,366,656	-				-0.6
2,366,656	-				-0.3
2,366,656	-				+0.5
2,366,656	-				-2.0
2,366,656	-				-0.1
2,366,656	-				-0.3
2,366,656	-				-1.3
2,366,656	-				+0.2
2,366,656	-				-0.5
2,366,656	-				-1.3
2,366,718	+		LRK54_RS10700	0.15	-0.6
2,366,718	+		LRK54_RS10700	0.15	+0.1
2,366,718	+		LRK54_RS10700	0.15	-0.1
2,366,718	+		LRK54_RS10700	0.15	+0.6
2,366,719	-		LRK54_RS10700	0.15	+1.2
2,366,719	-		LRK54_RS10700	0.15	+1.6
2,366,719	-		LRK54_RS10700	0.15	+1.8
2,366,719	-		LRK54_RS10700	0.15	+0.1
2,366,719	-		LRK54_RS10700	0.15	-1.6