Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06900

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
1,524,951	+		AO356_06895	0.80	+0.0
1,525,027	+		AO356_06895	0.83	+1.3
1,525,027	+		AO356_06895	0.83	-0.1
1,525,500	+				-0.7
1,525,500	+				-0.3
1,525,500	+				-0.0
1,525,500	+				+0.6
1,525,501	-				-0.8
1,525,501	-				-2.3
1,525,538	+				+0.7
1,525,556	+				+0.0
1,525,556	+				+1.1
1,525,556	+				-0.2
1,525,557	-				+0.0
1,525,557	-				-0.6
1,525,557	-				-1.9
1,525,571	+				+0.6
1,525,572	-				-1.2
1,525,572	-				-0.0
1,525,581	+				-0.8
1,525,581	+				+0.3
1,525,592	+				+0.3
1,525,593	-				+0.2
1,525,697	+				+0.5
1,525,697	+				+0.4
1,525,697	+				+1.0
1,525,697	+				+0.2
1,525,698	-				-2.0
1,525,698	-				-1.3
1,525,983	+				+1.4
1,525,983	+				+1.3
1,526,022	+		AO356_06900	0.12	+0.9
1,526,022	+		AO356_06900	0.12	+1.1
1,526,023	-		AO356_06900	0.12	+1.2
1,526,025	+		AO356_06900	0.13	+2.0
1,526,026	-		AO356_06900	0.13	+0.4
1,526,026	-		AO356_06900	0.13	+1.1
1,526,076	+		AO356_06900	0.16	+0.6
1,526,118	+		AO356_06900	0.19	+1.0
1,526,118	+		AO356_06900	0.19	+0.8
1,526,118	+		AO356_06900	0.19	+1.4
1,526,118	+		AO356_06900	0.19	+1.2
1,526,119	-		AO356_06900	0.19	+0.6
1,526,119	-		AO356_06900	0.19	+0.8
1,526,119	-		AO356_06900	0.19	+0.1
1,526,137	-		AO356_06900	0.21	+1.1
1,526,137	-		AO356_06900	0.21	+2.1
1,526,244	+		AO356_06900	0.29	+0.5
1,526,244	+		AO356_06900	0.29	+0.4
1,526,245	-		AO356_06900	0.29	+0.9
1,526,245	-		AO356_06900	0.29	+0.1
1,526,289	+		AO356_06900	0.32	+0.3
1,526,289	+		AO356_06900	0.32	+0.1
1,526,289	+		AO356_06900	0.32	+0.8
1,526,289	+		AO356_06900	0.32	+0.5
1,526,289	+		AO356_06900	0.32	+0.8
1,526,289	+		AO356_06900	0.32	+1.3
1,526,289	+		AO356_06900	0.32	+1.3
1,526,289	+		AO356_06900	0.32	+0.6
1,526,289	+		AO356_06900	0.32	+1.1
1,526,289	+		AO356_06900	0.32	+1.4
1,526,289	+		AO356_06900	0.32	+0.3
1,526,289	+		AO356_06900	0.32	+0.8
1,526,289	+		AO356_06900	0.32	+0.3
1,526,290	-		AO356_06900	0.32	+1.0
1,526,290	-		AO356_06900	0.32	+1.8
1,526,290	-		AO356_06900	0.32	+0.5
1,526,290	-		AO356_06900	0.32	+1.1
1,526,290	-		AO356_06900	0.32	-0.6
1,526,290	-		AO356_06900	0.32	+1.2
1,526,290	-		AO356_06900	0.32	+0.9
1,526,290	-		AO356_06900	0.32	+1.0
1,526,290	-		AO356_06900	0.32	+0.9
1,526,322	+		AO356_06900	0.34	+2.1
1,526,343	+		AO356_06900	0.36	+1.2
1,526,343	+		AO356_06900	0.36	+1.5
1,526,343	+		AO356_06900	0.36	+1.8
1,526,343	+		AO356_06900	0.36	+1.5
1,526,343	+		AO356_06900	0.36	+1.6
1,526,343	+		AO356_06900	0.36	+0.3
1,526,344	-		AO356_06900	0.36	+1.2
1,526,344	-		AO356_06900	0.36	-1.0
1,526,344	-		AO356_06900	0.36	+0.6
1,526,344	-		AO356_06900	0.36	+1.6
1,526,344	-		AO356_06900	0.36	+0.7
1,526,366	-		AO356_06900	0.38	+1.3
1,526,366	-		AO356_06900	0.38	+1.0
1,526,366	-		AO356_06900	0.38	+1.0
1,526,400	+		AO356_06900	0.40	+0.9
1,526,400	+		AO356_06900	0.40	+1.0
1,526,401	-		AO356_06900	0.40	+1.1
1,526,401	-		AO356_06900	0.40	-0.0
1,526,401	-		AO356_06900	0.40	+0.8
1,526,446	-		AO356_06900	0.43	+1.0
1,526,547	+		AO356_06900	0.51	+0.5
1,526,548	-		AO356_06900	0.51	+0.3
1,526,548	-		AO356_06900	0.51	+0.7
1,526,622	+		AO356_06900	0.56	+0.1
1,526,623	-		AO356_06900	0.56	+1.5
1,526,623	-		AO356_06900	0.56	+0.9
1,526,634	+		AO356_06900	0.57	+0.8
1,526,634	+		AO356_06900	0.57	+0.1
1,526,635	-		AO356_06900	0.57	+1.3
1,526,869	-		AO356_06900	0.74	+1.4
1,526,940	+		AO356_06900	0.80	+0.8
1,526,940	+		AO356_06900	0.80	+1.0
1,526,940	+		AO356_06900	0.80	+1.3
1,526,940	+		AO356_06900	0.80	+0.4
1,526,941	-		AO356_06900	0.80	+0.0
1,526,941	-		AO356_06900	0.80	+1.3
1,526,941	-		AO356_06900	0.80	+0.4
1,526,941	-		AO356_06900	0.80	+1.1
1,526,941	-		AO356_06900	0.80	+1.7
1,526,941	-		AO356_06900	0.80	-0.0
1,526,941	-		AO356_06900	0.80	+1.6
1,526,941	-		AO356_06900	0.80	+1.1
1,527,209	+				+0.1
1,527,218	-				+1.3
1,527,235	+				+0.7
1,527,236	-				-0.2
1,527,236	-				-0.4
1,527,244	+				+0.6
1,527,244	+				+1.1
1,527,244	+				+0.8
1,527,244	+				+0.8
1,527,244	+				-1.4
1,527,244	+				+1.3
1,527,244	+				+1.1
1,527,245	-				+0.1
1,527,245	-				+0.9
1,527,245	-				+0.7
1,527,245	-				+0.5
1,527,245	-				+1.1
1,527,245	-				+0.8
1,527,245	-				+1.1
1,527,245	-				+1.0
1,527,245	-				+1.2
1,527,245	-				+1.5
1,527,245	-				-0.2
1,527,323	-				+1.1
1,527,323	-				-0.5
1,527,340	+				+1.5
1,527,341	-				+1.0
1,527,341	-				+1.6
1,527,341	-				+0.9
1,527,422	-				+1.2
1,527,596	+		AO356_06905	0.19	+1.1
1,527,596	+		AO356_06905	0.19	+1.3
1,527,596	+		AO356_06905	0.19	+1.2
1,527,602	+		AO356_06905	0.19	+1.0
1,527,602	+		AO356_06905	0.19	-0.5
1,527,602	+		AO356_06905	0.19	+1.3
1,527,603	-		AO356_06905	0.19	-0.3
1,527,603	-		AO356_06905	0.19	+0.9
1,527,603	-		AO356_06905	0.19	+0.4
1,527,664	+		AO356_06905	0.23	+1.2
1,527,665	-		AO356_06905	0.23	-0.7
1,527,798	-		AO356_06905	0.30	+0.5
1,527,890	+		AO356_06905	0.35	+0.9
1,527,989	-		AO356_06905	0.40	+1.5
1,527,989	-		AO356_06905	0.40	+0.7
1,528,021	+		AO356_06905	0.42	+0.2
1,528,021	+		AO356_06905	0.42	+1.1
1,528,021	+		AO356_06905	0.42	+2.1
1,528,021	+		AO356_06905	0.42	+0.9
1,528,021	+		AO356_06905	0.42	+0.3
1,528,021	+		AO356_06905	0.42	+0.9
1,528,021	+		AO356_06905	0.42	+1.5
1,528,021	+		AO356_06905	0.42	-0.2
1,528,022	-		AO356_06905	0.42	+2.0
1,528,022	-		AO356_06905	0.42	+0.8
1,528,022	-		AO356_06905	0.42	+1.0
1,528,022	-		AO356_06905	0.42	+0.2
1,528,022	-		AO356_06905	0.42	+1.0
1,528,022	-		AO356_06905	0.42	-2.2
1,528,022	-		AO356_06905	0.42	+1.1
1,528,022	-		AO356_06905	0.42	+1.5
1,528,078	+		AO356_06905	0.45	+1.0
1,528,078	+		AO356_06905	0.45	+0.5
1,528,078	+		AO356_06905	0.45	+1.0
1,528,078	+		AO356_06905	0.45	-0.4
1,528,079	-		AO356_06905	0.45	+1.2
1,528,079	-		AO356_06905	0.45	+1.1
1,528,079	-		AO356_06905	0.45	+0.3
1,528,129	+		AO356_06905	0.48	+1.4
1,528,129	+		AO356_06905	0.48	+0.7
1,528,129	+		AO356_06905	0.48	+1.7
1,528,130	-		AO356_06905	0.48	+1.0
1,528,130	-		AO356_06905	0.48	+1.6
1,528,130	-		AO356_06905	0.48	+0.6
1,528,130	-		AO356_06905	0.48	+1.1
1,528,141	+		AO356_06905	0.48	+0.8
1,528,141	+		AO356_06905	0.48	+2.4
1,528,141	+		AO356_06905	0.48	+1.0
1,528,141	+		AO356_06905	0.48	+1.5
1,528,142	-		AO356_06905	0.48	+0.1
1,528,142	-		AO356_06905	0.48	+0.5
1,528,177	+		AO356_06905	0.50	-0.4
1,528,177	+		AO356_06905	0.50	-0.1
1,528,177	+		AO356_06905	0.50	+2.0
1,528,177	+		AO356_06905	0.50	+0.5
1,528,177	+		AO356_06905	0.50	+1.1
1,528,177	+		AO356_06905	0.50	+1.3
1,528,177	+		AO356_06905	0.50	+0.3
1,528,177	+		AO356_06905	0.50	+1.5
1,528,178	-		AO356_06905	0.50	-0.0
1,528,178	-		AO356_06905	0.50	+1.0
1,528,178	-		AO356_06905	0.50	+2.3