Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5160

Experiment: thiosulfate 0.25 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	thiosulfate 0.25 M
5,948,652	+		Pf6N2E2_5159	0.22	-2.2
5,948,653	-		Pf6N2E2_5159	0.22	-0.0
5,948,735	+		Pf6N2E2_5159	0.32	+1.6
5,948,736	-		Pf6N2E2_5159	0.32	+0.6
5,948,736	-		Pf6N2E2_5159	0.32	+0.0
5,948,736	-		Pf6N2E2_5159	0.32	-0.2
5,948,829	-		Pf6N2E2_5159	0.42	+0.6
5,948,834	+		Pf6N2E2_5159	0.43	-2.9
5,948,835	-		Pf6N2E2_5159	0.43	+0.7
5,948,924	+		Pf6N2E2_5159	0.53	-1.0
5,948,924	+		Pf6N2E2_5159	0.53	+0.8
5,948,924	+		Pf6N2E2_5159	0.53	+0.1
5,948,924	+		Pf6N2E2_5159	0.53	+0.1
5,948,999	+		Pf6N2E2_5159	0.62	+1.7
5,948,999	+		Pf6N2E2_5159	0.62	-1.0
5,948,999	+		Pf6N2E2_5159	0.62	+0.0
5,949,000	-		Pf6N2E2_5159	0.62	-0.1
5,949,000	-		Pf6N2E2_5159	0.62	+0.1
5,949,012	-		Pf6N2E2_5159	0.63	+0.5
5,949,047	+		Pf6N2E2_5159	0.67	+0.3
5,949,047	+		Pf6N2E2_5159	0.67	+1.3
5,949,048	-		Pf6N2E2_5159	0.67	-0.3
5,949,089	+		Pf6N2E2_5159	0.72	+0.9
5,949,090	-		Pf6N2E2_5159	0.72	-1.4
5,949,090	-		Pf6N2E2_5159	0.72	-0.2
5,949,090	-		Pf6N2E2_5159	0.72	+0.4
5,949,090	-		Pf6N2E2_5159	0.72	-0.9
5,949,090	-		Pf6N2E2_5159	0.72	+0.3
5,949,143	+		Pf6N2E2_5159	0.78	+0.7
5,949,143	+		Pf6N2E2_5159	0.78	-1.4
5,949,144	-		Pf6N2E2_5159	0.78	-0.7
5,949,326	+				-0.1
5,949,327	-				+0.6
5,949,327	-				+1.1
5,949,392	-				-0.3
5,949,392	-				-0.1
5,949,457	+				+0.0
5,949,458	-				+0.9
5,949,492	+				+0.8
5,949,493	-				-0.1
5,949,616	-		Pf6N2E2_5160	0.34	-2.7
5,949,616	-		Pf6N2E2_5160	0.34	-2.0
5,949,855	+				+0.2
5,949,855	+				-1.5
5,949,855	+				-2.1
5,949,855	+				-1.5
5,949,856	-				+0.0
5,949,856	-				+1.2
5,949,856	-				-1.5
5,949,856	-				-1.1
5,949,856	-				-2.6
5,949,856	-				-0.4
5,949,879	+				-1.1
5,949,879	+				-0.5
5,949,879	+				+0.3
5,949,880	-				-1.4
5,949,880	-				+0.3
5,949,880	-				-1.5
5,949,880	-				-1.5
5,949,949	+				+0.1
5,949,949	+				-1.0
5,949,949	+				-0.1
5,949,957	+				-1.4
5,949,957	+				+0.3
5,949,957	+				-1.1
5,949,958	-				+0.1
5,949,958	-				-0.6
5,950,024	+				-1.0
5,950,024	+				+0.0
5,950,024	+				-0.5
5,950,025	-				-1.7
5,950,048	-				-0.6
5,950,084	+				-0.0
5,950,084	+				-0.1
5,950,084	+				-0.5
5,950,085	-				+1.5
5,950,117	+				-0.1
5,950,117	+				-0.6
5,950,140	+				-0.2
5,950,140	+				-0.2
5,950,141	-				+0.0
5,950,243	+				-1.0
5,950,243	+				-0.5
5,950,243	+				+0.4
5,950,244	-				+1.2
5,950,244	-				+0.6
5,950,252	-				-0.1
5,950,298	+				-0.4
5,950,298	+				+0.0
5,950,298	+				-0.4
5,950,298	+				+0.7
5,950,299	-				+0.8
5,950,478	+		Pf6N2E2_5161	0.16	-0.5
5,950,529	+		Pf6N2E2_5161	0.21	-1.0
5,950,529	+		Pf6N2E2_5161	0.21	-0.8