Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4642

Experiment: thiosulfate 0.25 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	thiosulfate 0.25 M
5,370,290	-				+2.0
5,370,290	-				+0.2
5,370,290	-				+0.8
5,370,295	-				-0.3
5,370,295	-				-2.9
5,370,295	-				+1.2
5,370,295	-				+1.2
5,370,451	-				-1.0
5,370,453	-				+0.5
5,370,453	-				+0.2
5,370,517	+		Pf6N2E2_4640	0.55	-2.4
5,370,532	-		Pf6N2E2_4640	0.67	-1.5
5,370,700	+		Pf6N2E2_4641	0.26	+1.1
5,370,700	+		Pf6N2E2_4641	0.26	-0.8
5,370,701	-		Pf6N2E2_4641	0.26	-0.1
5,370,701	-		Pf6N2E2_4641	0.26	-0.3
5,370,701	-		Pf6N2E2_4641	0.26	+0.2
5,370,701	-		Pf6N2E2_4641	0.26	-0.1
5,370,701	-		Pf6N2E2_4641	0.26	-0.2
5,370,701	-		Pf6N2E2_4641	0.26	-0.0
5,370,701	-		Pf6N2E2_4641	0.26	-0.5
5,370,742	+		Pf6N2E2_4641	0.37	-0.4
5,370,742	+		Pf6N2E2_4641	0.37	-0.5
5,370,742	+		Pf6N2E2_4641	0.37	-1.0
5,370,742	+		Pf6N2E2_4641	0.37	+0.5
5,370,742	+		Pf6N2E2_4641	0.37	+0.1
5,370,742	+		Pf6N2E2_4641	0.37	-0.8
5,370,742	+		Pf6N2E2_4641	0.37	-1.4
5,370,743	-		Pf6N2E2_4641	0.37	+0.3
5,370,743	-		Pf6N2E2_4641	0.37	-1.2
5,370,743	-		Pf6N2E2_4641	0.37	-1.1
5,370,743	-		Pf6N2E2_4641	0.37	-0.9
5,370,743	-		Pf6N2E2_4641	0.37	-0.0
5,370,825	+		Pf6N2E2_4641	0.57	-0.6
5,370,958	+				+0.6
5,370,958	+				-0.4
5,370,959	-				-0.5
5,370,959	-				+0.0
5,370,959	-				+0.7
5,371,052	+				-0.9
5,371,052	+				+0.3
5,371,052	+				-1.2
5,371,052	+				+0.3
5,371,052	+				+1.1
5,371,052	+				-0.7
5,371,052	+				+1.2
5,371,053	-				+0.6
5,371,053	-				-0.0
5,371,053	-				+0.3
5,371,056	+				+1.8
5,371,056	+				-0.7
5,371,056	+				+0.7
5,371,056	+				+0.8
5,371,056	+				-1.0
5,371,057	-				-0.7
5,371,057	-				+0.2
5,371,057	-				+0.5
5,371,083	+				+1.1
5,371,083	+				-0.7
5,371,084	-				-1.2
5,371,200	+		Pf6N2E2_4642	0.13	-0.3
5,371,201	-		Pf6N2E2_4642	0.13	+0.0
5,371,522	+		Pf6N2E2_4642	0.50	+1.7
5,371,522	+		Pf6N2E2_4642	0.50	+0.5
5,371,522	+		Pf6N2E2_4642	0.50	+0.5
5,371,522	+		Pf6N2E2_4642	0.50	+0.5
5,371,523	-		Pf6N2E2_4642	0.50	-0.0
5,371,523	-		Pf6N2E2_4642	0.50	+0.2
5,371,523	-		Pf6N2E2_4642	0.50	-0.1
5,371,523	-		Pf6N2E2_4642	0.50	+0.7
5,371,713	+		Pf6N2E2_4642	0.71	+0.1
5,371,713	+		Pf6N2E2_4642	0.71	+0.8
5,371,714	-		Pf6N2E2_4642	0.71	+1.6
5,371,714	-		Pf6N2E2_4642	0.71	-0.9
5,371,714	-		Pf6N2E2_4642	0.71	+0.4
5,371,714	-		Pf6N2E2_4642	0.71	-1.6
5,371,714	-		Pf6N2E2_4642	0.71	-0.5
5,371,714	-		Pf6N2E2_4642	0.71	+0.9
5,371,714	-		Pf6N2E2_4642	0.71	+1.1
5,371,717	+		Pf6N2E2_4642	0.72	+0.4
5,371,717	+		Pf6N2E2_4642	0.72	+0.6
5,371,718	-		Pf6N2E2_4642	0.72	+0.7
5,371,718	-		Pf6N2E2_4642	0.72	-1.6
5,371,774	+		Pf6N2E2_4642	0.78	-0.1
5,371,774	+		Pf6N2E2_4642	0.78	+0.1
5,371,774	+		Pf6N2E2_4642	0.78	+1.3
5,371,866	+		Pf6N2E2_4642	0.89	-1.9
5,371,867	-		Pf6N2E2_4642	0.89	+0.1
5,371,923	+				-0.7
5,371,923	+				+0.7
5,371,923	+				+0.5
5,371,923	+				+0.5
5,371,923	+				-0.9
5,371,924	-				-0.0
5,371,924	-				+3.0
5,371,924	-				-0.4
5,371,981	+				-0.3
5,371,981	+				+0.0
5,371,981	+				-0.5
5,372,080	+				-0.1
5,372,081	-				+0.5
5,372,131	-				-1.8
5,372,131	-				+2.1
5,372,131	-				-0.4
5,372,131	-				-0.6
5,372,207	+		Pf6N2E2_4643	0.12	+0.2
5,372,244	+		Pf6N2E2_4643	0.14	-1.0
5,372,244	+		Pf6N2E2_4643	0.14	+1.4
5,372,244	+		Pf6N2E2_4643	0.14	+1.5
5,372,245	-		Pf6N2E2_4643	0.14	-0.7
5,372,245	-		Pf6N2E2_4643	0.14	-0.1
5,372,245	-		Pf6N2E2_4643	0.14	-0.5
5,372,535	+		Pf6N2E2_4643	0.31	-0.4
5,372,535	+		Pf6N2E2_4643	0.31	+0.5
5,372,535	+		Pf6N2E2_4643	0.31	+0.0
5,372,535	+		Pf6N2E2_4643	0.31	+0.3
5,372,536	-		Pf6N2E2_4643	0.31	+2.0
5,372,616	+		Pf6N2E2_4643	0.35	-1.7
5,372,616	+		Pf6N2E2_4643	0.35	-0.3
5,372,616	+		Pf6N2E2_4643	0.35	-0.8
5,372,616	+		Pf6N2E2_4643	0.35	-1.7
5,372,617	-		Pf6N2E2_4643	0.35	-0.7
5,372,617	-		Pf6N2E2_4643	0.35	+1.5
5,372,617	-		Pf6N2E2_4643	0.35	+1.4
5,372,617	-		Pf6N2E2_4643	0.35	-0.5
5,372,625	+		Pf6N2E2_4643	0.36	+0.8
5,372,677	+		Pf6N2E2_4643	0.39	+1.3
5,372,677	+		Pf6N2E2_4643	0.39	-1.3
5,372,678	-		Pf6N2E2_4643	0.39	+1.0
5,372,682	+		Pf6N2E2_4643	0.39	-0.1
5,372,768	+		Pf6N2E2_4643	0.44	+0.7
5,372,768	+		Pf6N2E2_4643	0.44	-0.4
5,372,768	+		Pf6N2E2_4643	0.44	-1.7
5,372,803	+		Pf6N2E2_4643	0.46	-0.9
5,372,803	+		Pf6N2E2_4643	0.46	-0.0
5,372,804	-		Pf6N2E2_4643	0.46	-0.4
5,372,804	-		Pf6N2E2_4643	0.46	+1.5
5,372,804	-		Pf6N2E2_4643	0.46	+0.4
5,372,804	-		Pf6N2E2_4643	0.46	-0.2
5,372,804	-		Pf6N2E2_4643	0.46	+0.5
5,372,840	+		Pf6N2E2_4643	0.48	-0.2
5,372,840	+		Pf6N2E2_4643	0.48	+2.0
5,372,840	+		Pf6N2E2_4643	0.48	-0.5
5,372,840	+		Pf6N2E2_4643	0.48	-0.6
5,372,840	+		Pf6N2E2_4643	0.48	-0.5
5,372,840	+		Pf6N2E2_4643	0.48	-0.3
5,372,840	+		Pf6N2E2_4643	0.48	+1.2
5,372,840	+		Pf6N2E2_4643	0.48	-0.4
5,372,841	-		Pf6N2E2_4643	0.48	-0.4
5,372,841	-		Pf6N2E2_4643	0.48	+1.1
5,372,841	-		Pf6N2E2_4643	0.48	-0.2
5,372,841	-		Pf6N2E2_4643	0.48	-0.2
5,372,841	-		Pf6N2E2_4643	0.48	+1.0
5,372,841	-		Pf6N2E2_4643	0.48	+1.2
5,372,912	+		Pf6N2E2_4643	0.53	+0.5