Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1548

Experiment: thiosulfate 0.25 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	thiosulfate 0.25 M
1,806,570	-		Pf6N2E2_1547	0.15	+1.6
1,806,771	+		Pf6N2E2_1547	0.36	-0.7
1,806,772	-		Pf6N2E2_1547	0.36	-0.1
1,806,858	+		Pf6N2E2_1547	0.45	+1.0
1,806,858	+		Pf6N2E2_1547	0.45	-1.0
1,806,859	-		Pf6N2E2_1547	0.45	+0.3
1,806,989	+		Pf6N2E2_1547	0.58	-0.8
1,806,990	-		Pf6N2E2_1547	0.58	+0.9
1,806,990	-		Pf6N2E2_1547	0.58	-0.6
1,806,990	-		Pf6N2E2_1547	0.58	-0.7
1,807,223	+		Pf6N2E2_1547	0.83	+0.4
1,807,223	+		Pf6N2E2_1547	0.83	-1.9
1,807,224	-		Pf6N2E2_1547	0.83	-1.6
1,807,414	-				+2.7
1,807,414	-				-0.5
1,807,414	-				+0.4
1,807,414	-				-0.8
1,807,414	-				+0.7
1,807,427	+				-0.6
1,807,498	+				+0.4
1,807,499	-				+0.9
1,807,499	-				+0.1
1,807,732	-		Pf6N2E2_1548	0.62	-2.5
1,807,804	-		Pf6N2E2_1548	0.81	-2.9
1,807,804	-		Pf6N2E2_1548	0.81	-1.5
1,807,806	+		Pf6N2E2_1548	0.81	+0.7
1,807,815	+		Pf6N2E2_1548	0.84	-0.0
1,807,816	-		Pf6N2E2_1548	0.84	-1.0
1,807,875	+				-1.2
1,807,875	+				-0.8
1,807,961	+				-1.0
1,807,962	-				-0.8
1,808,097	-		Pf6N2E2_1549	0.21	+2.7
1,808,244	+		Pf6N2E2_1549	0.37	+1.1
1,808,307	+		Pf6N2E2_1549	0.44	-0.2
1,808,308	-		Pf6N2E2_1549	0.44	-0.5
1,808,431	+		Pf6N2E2_1549	0.57	+0.7
1,808,432	-		Pf6N2E2_1549	0.57	-2.2
1,808,497	+		Pf6N2E2_1549	0.64	-0.7
1,808,623	+		Pf6N2E2_1549	0.77	+0.7
1,808,672	-		Pf6N2E2_1549	0.83	-2.7
1,808,672	-		Pf6N2E2_1549	0.83	+0.3
1,808,672	-		Pf6N2E2_1549	0.83	+1.7
1,808,798	+				+1.2
1,808,798	+				+0.8
1,808,798	+				-0.1
1,808,799	-				+1.3
1,808,799	-				+0.2
1,808,799	-				-0.1