Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_14065

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
3,190,448	+		AO356_14055	0.54	+0.1
3,190,448	+		AO356_14055	0.54	-0.0
3,190,449	-		AO356_14055	0.54	+0.3
3,190,449	-		AO356_14055	0.54	+0.3
3,190,449	-		AO356_14055	0.54	+0.5
3,190,449	-		AO356_14055	0.54	+0.0
3,190,496	+		AO356_14055	0.58	+0.5
3,190,497	-		AO356_14055	0.58	+0.1
3,190,497	-		AO356_14055	0.58	-0.3
3,190,850	+		AO356_14055	0.85	+0.6
3,190,850	+		AO356_14055	0.85	+0.4
3,190,851	-		AO356_14055	0.85	-0.5
3,190,851	-		AO356_14055	0.85	+0.0
3,190,878	-		AO356_14055	0.87	-0.4
3,190,910	+		AO356_14055	0.89	+0.9
3,190,910	+		AO356_14055	0.89	+0.2
3,190,910	+		AO356_14055	0.89	+1.0
3,190,910	+		AO356_14055	0.89	-0.0
3,190,911	-		AO356_14055	0.90	-0.4
3,190,926	+				-0.4
3,190,926	+				+0.6
3,190,926	+				+0.2
3,190,927	-				+0.7
3,190,927	-				+1.6
3,190,927	-				-0.4
3,190,969	-				+0.4
3,190,969	-				+0.2
3,190,982	+				-0.9
3,190,983	-				-0.7
3,191,120	-				+0.3
3,191,120	-				+0.6
3,191,120	-				+0.2
3,191,121	+				+0.0
3,191,151	+				+0.2
3,191,151	+				+0.6
3,191,151	+				-1.1
3,191,151	+				+1.6
3,191,151	+				+1.3
3,191,151	+				+0.3
3,191,151	+				-0.9
3,191,152	-				-0.4
3,191,152	-				+0.1
3,191,152	-				+1.4
3,191,201	+				-0.2
3,191,201	+				-0.2
3,191,202	-				+0.7
3,191,295	+		AO356_14060	0.23	+0.7
3,191,295	+		AO356_14060	0.23	-0.9
3,191,296	-		AO356_14060	0.24	-0.9
3,191,296	-		AO356_14060	0.24	+1.5
3,191,484	-				-0.2
3,191,493	+				+0.0
3,191,494	-				+0.1
3,191,568	+		AO356_14065	0.12	+1.0
3,191,568	+		AO356_14065	0.12	+0.6
3,191,569	-		AO356_14065	0.12	+0.4
3,191,588	+		AO356_14065	0.14	+1.0
3,191,613	+		AO356_14065	0.16	+0.8
3,191,614	-		AO356_14065	0.16	+0.6
3,191,614	-		AO356_14065	0.16	-0.7
3,191,614	-		AO356_14065	0.16	+0.0
3,191,614	-		AO356_14065	0.16	+1.1
3,191,614	-		AO356_14065	0.16	-0.2
3,191,614	-		AO356_14065	0.16	-0.5
3,191,767	+		AO356_14065	0.30	-0.1
3,191,767	+		AO356_14065	0.30	+0.3
3,191,767	+		AO356_14065	0.30	+0.3
3,191,768	-		AO356_14065	0.30	+1.8
3,191,768	-		AO356_14065	0.30	+0.7
3,192,060	+		AO356_14065	0.56	+0.4
3,192,061	-		AO356_14065	0.56	+0.4
3,192,061	-		AO356_14065	0.56	+0.3
3,192,145	+		AO356_14065	0.63	+0.2
3,192,145	+		AO356_14065	0.63	+0.2
3,192,145	+		AO356_14065	0.63	+0.5
3,192,145	+		AO356_14065	0.63	-0.0
3,192,145	+		AO356_14065	0.63	+0.2
3,192,145	+		AO356_14065	0.63	+0.2
3,192,146	-		AO356_14065	0.63	-0.4
3,192,146	-		AO356_14065	0.63	-0.0
3,192,146	-		AO356_14065	0.63	+0.7
3,192,146	-		AO356_14065	0.63	+0.1
3,192,146	-		AO356_14065	0.63	-1.9
3,192,146	-		AO356_14065	0.63	+0.1
3,192,146	-		AO356_14065	0.63	+0.6
3,192,238	+		AO356_14065	0.72	+0.8
3,192,239	-		AO356_14065	0.72	+0.4
3,192,239	-		AO356_14065	0.72	+0.6
3,192,366	-		AO356_14065	0.83	-0.2
3,192,366	-		AO356_14065	0.83	+0.4
3,192,366	-		AO356_14065	0.83	+0.8
3,192,677	+				+0.5
3,192,678	-				+0.3
3,192,735	+				-0.2
3,192,783	+				+0.0
3,192,783	+				+0.9
3,192,783	+				-0.5
3,192,784	-				+0.7
3,192,784	-				+0.4
3,192,819	+				+0.7
3,192,819	+				-0.5
3,192,819	+				+0.4
3,192,822	+				+1.1
3,192,822	+				-1.1
3,192,822	+				-0.7
3,192,823	-				+0.4
3,192,823	-				+0.4
3,192,828	+				-0.8
3,192,828	+				+0.2
3,192,828	+				+0.0
3,192,828	+				+0.1
3,192,828	+				+0.1
3,192,828	+				+1.1
3,192,829	-				+0.1
3,192,829	-				+0.9
3,192,829	-				-0.2
3,192,829	-				+0.2
3,192,852	+				+1.5
3,192,852	+				+0.1
3,192,852	+				+0.7
3,192,853	-				-0.3
3,192,853	-				+0.6
3,192,853	-				-0.3
3,192,853	-				-0.3
3,192,853	-				+0.3
3,192,853	-				-0.8
3,192,853	-				+1.4
3,192,930	+				+0.1
3,192,931	-				-0.1
3,192,931	-				-0.1
3,192,948	+				-0.5
3,192,949	-				-0.4
3,192,949	-				-0.5
3,192,955	+				+1.5
3,192,957	+				-0.1
3,192,957	+				-0.9
3,192,957	+				-0.3
3,192,957	+				+0.0
3,192,958	-				+0.4
3,192,958	-				-1.0
3,192,958	-				+0.4
3,192,958	-				-0.5
3,192,958	-				-0.2
3,192,958	-				-0.2
3,192,958	-				+0.3
3,192,958	-				+0.4
3,192,958	-				+0.2
3,192,991	+				+0.2
3,192,991	+				+1.5
3,192,992	-				-0.7
3,192,999	+				+0.5
3,193,000	-				+0.3
3,193,000	-				+0.8
3,193,000	-				-0.1
3,193,000	-				+0.3
3,193,014	+				+1.0
3,193,014	+				+0.2
3,193,014	+				+1.3
3,193,014	+				+1.0
3,193,015	-				+0.1
3,193,069	-		AO356_14070	0.12	+1.3
3,193,069	-		AO356_14070	0.12	+0.6
3,193,069	-		AO356_14070	0.12	-0.1
3,193,161	+		AO356_14070	0.16	-0.5
3,193,161	+		AO356_14070	0.16	-0.9
3,193,161	+		AO356_14070	0.16	-0.0
3,193,161	+		AO356_14070	0.16	+0.4
3,193,161	+		AO356_14070	0.16	+0.3
3,193,162	-		AO356_14070	0.16	+0.6
3,193,162	-		AO356_14070	0.16	-0.5
3,193,162	-		AO356_14070	0.16	-0.7
3,193,162	-		AO356_14070	0.16	+0.1
3,193,162	-		AO356_14070	0.16	-0.2
3,193,162	-		AO356_14070	0.16	+0.4
3,193,167	+		AO356_14070	0.16	+0.5
3,193,167	+		AO356_14070	0.16	-0.3
3,193,168	-		AO356_14070	0.16	-0.2
3,193,168	-		AO356_14070	0.16	+0.1
3,193,168	-		AO356_14070	0.16	+1.4
3,193,168	-		AO356_14070	0.16	+0.7
3,193,168	-		AO356_14070	0.16	+0.1
3,193,168	-		AO356_14070	0.16	-0.3
3,193,168	-		AO356_14070	0.16	-0.0
3,193,341	+		AO356_14070	0.23	+0.5
3,193,341	+		AO356_14070	0.23	-0.1
3,193,341	+		AO356_14070	0.23	+0.2
3,193,342	-		AO356_14070	0.23	+0.3
3,193,342	-		AO356_14070	0.23	+0.6
3,193,342	-		AO356_14070	0.23	-0.3
3,193,360	-		AO356_14070	0.24	+1.2
3,193,446	+		AO356_14070	0.28	-0.3
3,193,446	+		AO356_14070	0.28	-0.5
3,193,473	+		AO356_14070	0.29	-1.5
3,193,473	+		AO356_14070	0.29	+0.6
3,193,473	+		AO356_14070	0.29	+0.5
3,193,473	+		AO356_14070	0.29	+0.5
3,193,473	+		AO356_14070	0.29	+0.5
3,193,474	-		AO356_14070	0.29	-1.3
3,193,474	-		AO356_14070	0.29	-0.3