Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00040

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
10,063	+				+0.9
10,065	+				-0.2
10,065	+				+0.2
10,065	+				-1.1
10,065	+				+0.2
10,065	+				+0.2
10,067	+				-0.1
10,067	+				-0.3
10,067	+				+0.2
10,071	-				-0.4
10,071	-				+0.0
10,072	+				-0.2
10,072	+				+0.1
10,084	+				-0.4
10,103	-				-0.3
10,104	+				+0.4
10,147	+		MMP_RS00035	0.15	-0.2
10,147	+		MMP_RS00035	0.15	+0.2
10,147	+		MMP_RS00035	0.15	-0.5
10,150	-		MMP_RS00035	0.16	-0.3
10,150	-		MMP_RS00035	0.16	+0.1
10,151	+		MMP_RS00035	0.17	-1.0
10,151	+		MMP_RS00035	0.17	+0.3
10,155	-		MMP_RS00035	0.18	-0.3
10,157	-		MMP_RS00035	0.19	+0.1
10,158	+		MMP_RS00035	0.19	+0.0
10,158	+		MMP_RS00035	0.19	+0.0
10,158	+		MMP_RS00035	0.19	-0.7
10,160	-		MMP_RS00035	0.20	-1.5
10,237	-		MMP_RS00035	0.47	+0.2
10,238	+		MMP_RS00035	0.48	+0.1
10,238	-		MMP_RS00035	0.48	+0.1
10,239	-		MMP_RS00035	0.48	-0.5
10,239	-		MMP_RS00035	0.48	-0.5
10,239	-		MMP_RS00035	0.48	+0.1
10,239	-		MMP_RS00035	0.48	-0.3
10,240	+		MMP_RS00035	0.48	-0.0
10,240	+		MMP_RS00035	0.48	-0.1
10,240	+		MMP_RS00035	0.48	-0.0
10,240	+		MMP_RS00035	0.48	-0.1
10,240	+		MMP_RS00035	0.48	-0.2
10,240	+		MMP_RS00035	0.48	+0.4
10,310	+		MMP_RS00035	0.73	+0.2
10,326	+		MMP_RS00035	0.79	-0.1
10,383	-				-0.3
10,569	-		MMP_RS00040	0.14	-0.3
10,569	-		MMP_RS00040	0.14	-0.8
10,569	-		MMP_RS00040	0.14	+0.0
10,604	-		MMP_RS00040	0.18	-0.7
10,605	+		MMP_RS00040	0.18	-0.3
10,625	+		MMP_RS00040	0.20	-0.8
10,681	-		MMP_RS00040	0.25	-1.0
10,731	-		MMP_RS00040	0.30	-1.1
11,105	+		MMP_RS00040	0.65	+0.2
11,197	-		MMP_RS00040	0.73	-0.1
11,286	+		MMP_RS00040	0.82	-0.3
11,315	+		MMP_RS00040	0.84	-0.7
11,330	+		MMP_RS00040	0.86	+0.1
11,354	+		MMP_RS00040	0.88	-1.5
11,450	+				-0.3
11,452	-				+0.1
11,464	-				+0.6
11,523	-				+0.3
11,533	+				+0.1
11,671	+				-0.7
11,714	+				-1.6
11,825	+				-2.6