Experiment: LB 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0719 and Ga0059261_0720 are separated by 58 nucleotides Ga0059261_0720 and Ga0059261_0721 are separated by 19 nucleotides Ga0059261_0721 and Ga0059261_0722 are separated by 99 nucleotides
Ga0059261_0719: Ga0059261_0719 - Uncharacterized protein conserved in bacteria, at 752,765 to 753,802
_0719
Ga0059261_0720: Ga0059261_0720 - Predicted small integral membrane protein, at 753,861 to 754,268
_0720
Ga0059261_0721: Ga0059261_0721 - thiamine-phosphate diphosphorylase, at 754,288 to 754,977
_0721
Ga0059261_0722: Ga0059261_0722 - L-aminopeptidase/D-esterase, at 755,077 to 756,216
_0722
Position (kb) 754
755 Strain fitness (log2 ratio) -2
-1
0
1
2 at 753.308 kb on - strand, within Ga0059261_0719 at 753.577 kb on + strand, within Ga0059261_0719 at 753.650 kb on - strand, within Ga0059261_0719 at 753.668 kb on - strand, within Ga0059261_0719 at 753.668 kb on - strand, within Ga0059261_0719 at 753.995 kb on + strand, within Ga0059261_0720 at 753.995 kb on + strand, within Ga0059261_0720 at 753.996 kb on - strand, within Ga0059261_0720 at 753.996 kb on - strand, within Ga0059261_0720 at 754.144 kb on + strand, within Ga0059261_0720 at 754.242 kb on + strand at 754.256 kb on + strand at 754.256 kb on + strand at 754.256 kb on + strand at 754.256 kb on + strand at 754.256 kb on + strand at 754.257 kb on - strand at 754.257 kb on - strand at 754.257 kb on - strand at 754.257 kb on - strand at 754.289 kb on + strand at 754.289 kb on + strand at 754.986 kb on + strand at 754.986 kb on + strand at 754.986 kb on + strand at 754.987 kb on - strand at 754.987 kb on - strand at 754.987 kb on - strand at 754.987 kb on - strand at 754.987 kb on - strand at 754.988 kb on + strand at 754.988 kb on + strand at 754.989 kb on - strand at 754.989 kb on - strand at 754.989 kb on - strand at 755.268 kb on + strand, within Ga0059261_0722 at 755.341 kb on + strand, within Ga0059261_0722 at 755.342 kb on - strand, within Ga0059261_0722 at 755.510 kb on + strand, within Ga0059261_0722 at 755.510 kb on + strand, within Ga0059261_0722 at 755.511 kb on - strand, within Ga0059261_0722 at 755.511 kb on - strand, within Ga0059261_0722 at 755.743 kb on + strand, within Ga0059261_0722 at 755.743 kb on + strand, within Ga0059261_0722 at 755.743 kb on + strand, within Ga0059261_0722 at 755.743 kb on + strand, within Ga0059261_0722 at 755.743 kb on + strand, within Ga0059261_0722 at 755.744 kb on - strand, within Ga0059261_0722 at 755.744 kb on - strand, within Ga0059261_0722 at 755.744 kb on - strand, within Ga0059261_0722 at 755.744 kb on - strand, within Ga0059261_0722 at 755.744 kb on - strand, within Ga0059261_0722 at 755.798 kb on - strand, within Ga0059261_0722 at 755.962 kb on + strand, within Ga0059261_0722 at 755.963 kb on - strand, within Ga0059261_0722
Per-strain Table
Position Strand Gene LocusTag Fraction LB 20C remove 753,308 - Ga0059261_0719 0.52 +0.5 753,577 + Ga0059261_0719 0.78 -0.2 753,650 - Ga0059261_0719 0.85 -1.5 753,668 - Ga0059261_0719 0.87 -0.3 753,668 - Ga0059261_0719 0.87 +0.3 753,995 + Ga0059261_0720 0.33 +0.3 753,995 + Ga0059261_0720 0.33 -0.8 753,996 - Ga0059261_0720 0.33 +0.2 753,996 - Ga0059261_0720 0.33 +1.0 754,144 + Ga0059261_0720 0.69 -0.5 754,242 + +0.2 754,256 + +0.1 754,256 + +0.4 754,256 + -0.5 754,256 + +0.2 754,256 + -0.0 754,257 - +0.3 754,257 - +0.0 754,257 - -0.7 754,257 - -0.9 754,289 + +0.0 754,289 + +1.1 754,986 + -0.9 754,986 + -2.1 754,986 + -2.4 754,987 - +0.6 754,987 - +0.0 754,987 - +0.2 754,987 - +2.5 754,987 - -0.7 754,988 + -1.4 754,988 + -1.1 754,989 - -0.1 754,989 - +0.4 754,989 - -0.1 755,268 + Ga0059261_0722 0.17 +0.8 755,341 + Ga0059261_0722 0.23 -0.1 755,342 - Ga0059261_0722 0.23 -0.3 755,510 + Ga0059261_0722 0.38 +0.5 755,510 + Ga0059261_0722 0.38 -0.1 755,511 - Ga0059261_0722 0.38 +0.5 755,511 - Ga0059261_0722 0.38 -0.4 755,743 + Ga0059261_0722 0.58 +1.4 755,743 + Ga0059261_0722 0.58 -0.1 755,743 + Ga0059261_0722 0.58 +0.3 755,743 + Ga0059261_0722 0.58 -0.2 755,743 + Ga0059261_0722 0.58 +0.5 755,744 - Ga0059261_0722 0.59 -0.6 755,744 - Ga0059261_0722 0.59 +0.4 755,744 - Ga0059261_0722 0.59 -0.3 755,744 - Ga0059261_0722 0.59 +1.5 755,744 - Ga0059261_0722 0.59 +1.0 755,798 - Ga0059261_0722 0.63 -0.2 755,962 + Ga0059261_0722 0.78 +0.0 755,963 - Ga0059261_0722 0.78 -0.4
Or see this region's nucleotide sequence