Experiment: LB_0.5%bileacids_aerobic_120MIN_ZN11A
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CSW01_17925 and CSW01_17930 are separated by 168 nucleotides CSW01_17930 and CSW01_17935 are separated by 188 nucleotides
CSW01_17925: CSW01_17925 - 3-oxoacyl-ACP synthase III, at 693,764 to 694,852
_17925
CSW01_17930: CSW01_17930 - thioredoxin TrxC, at 695,021 to 695,455
_17930
CSW01_17935: CSW01_17935 - MFS transporter, at 695,644 to 696,798
_17935
Position (kb) 695
696 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 694.037 kb on + strand, within CSW01_17925 at 694.072 kb on + strand, within CSW01_17925 at 694.081 kb on - strand, within CSW01_17925 at 694.230 kb on + strand, within CSW01_17925 at 694.238 kb on - strand, within CSW01_17925 at 694.352 kb on - strand, within CSW01_17925 at 694.357 kb on + strand, within CSW01_17925 at 694.360 kb on - strand, within CSW01_17925 at 694.374 kb on + strand, within CSW01_17925 at 694.384 kb on + strand, within CSW01_17925 at 694.390 kb on - strand, within CSW01_17925 at 694.394 kb on + strand, within CSW01_17925 at 694.407 kb on - strand, within CSW01_17925 at 694.450 kb on - strand, within CSW01_17925 at 694.519 kb on - strand, within CSW01_17925 at 694.627 kb on + strand, within CSW01_17925 at 694.648 kb on + strand, within CSW01_17925 at 694.731 kb on - strand, within CSW01_17925 at 694.731 kb on - strand, within CSW01_17925 at 694.812 kb on + strand at 694.812 kb on + strand at 694.836 kb on + strand at 694.894 kb on + strand at 694.901 kb on + strand at 694.935 kb on + strand at 694.942 kb on + strand at 694.980 kb on - strand at 695.058 kb on + strand at 695.058 kb on + strand at 695.067 kb on - strand, within CSW01_17930 at 695.067 kb on - strand, within CSW01_17930 at 695.218 kb on + strand, within CSW01_17930 at 695.218 kb on + strand, within CSW01_17930 at 695.221 kb on - strand, within CSW01_17930 at 695.224 kb on + strand, within CSW01_17930 at 695.226 kb on - strand, within CSW01_17930 at 695.269 kb on + strand, within CSW01_17930 at 695.276 kb on + strand, within CSW01_17930 at 695.284 kb on - strand, within CSW01_17930 at 695.355 kb on + strand, within CSW01_17930 at 695.392 kb on + strand, within CSW01_17930 at 695.496 kb on + strand at 695.740 kb on + strand at 695.870 kb on + strand, within CSW01_17935 at 695.877 kb on - strand, within CSW01_17935 at 695.920 kb on + strand, within CSW01_17935 at 696.022 kb on + strand, within CSW01_17935 at 696.066 kb on - strand, within CSW01_17935 at 696.074 kb on - strand, within CSW01_17935 at 696.116 kb on - strand, within CSW01_17935 at 696.143 kb on + strand, within CSW01_17935 at 696.150 kb on + strand, within CSW01_17935 at 696.169 kb on + strand, within CSW01_17935 at 696.169 kb on + strand, within CSW01_17935 at 696.169 kb on + strand, within CSW01_17935 at 696.185 kb on + strand, within CSW01_17935 at 696.203 kb on - strand, within CSW01_17935 at 696.218 kb on - strand, within CSW01_17935 at 696.218 kb on - strand, within CSW01_17935 at 696.352 kb on - strand, within CSW01_17935 at 696.402 kb on - strand, within CSW01_17935 at 696.447 kb on - strand, within CSW01_17935
Per-strain Table
Position Strand Gene LocusTag Fraction LB_0.5%bileacids_aerobic_120MIN_ZN11A remove 694,037 + CSW01_17925 0.25 -0.2 694,072 + CSW01_17925 0.28 -0.3 694,081 - CSW01_17925 0.29 -0.0 694,230 + CSW01_17925 0.43 -2.8 694,238 - CSW01_17925 0.44 +0.7 694,352 - CSW01_17925 0.54 -0.0 694,357 + CSW01_17925 0.54 -1.7 694,360 - CSW01_17925 0.55 -0.2 694,374 + CSW01_17925 0.56 -0.2 694,384 + CSW01_17925 0.57 -0.1 694,390 - CSW01_17925 0.57 -0.5 694,394 + CSW01_17925 0.58 +0.2 694,407 - CSW01_17925 0.59 -0.4 694,450 - CSW01_17925 0.63 +0.1 694,519 - CSW01_17925 0.69 +0.3 694,627 + CSW01_17925 0.79 -0.1 694,648 + CSW01_17925 0.81 +1.1 694,731 - CSW01_17925 0.89 -0.7 694,731 - CSW01_17925 0.89 +0.1 694,812 + +0.1 694,812 + -0.3 694,836 + +0.1 694,894 + +0.0 694,901 + +0.1 694,935 + +0.3 694,942 + +0.3 694,980 - -0.9 695,058 + -0.1 695,058 + +1.3 695,067 - CSW01_17930 0.11 +0.9 695,067 - CSW01_17930 0.11 -1.5 695,218 + CSW01_17930 0.45 +1.2 695,218 + CSW01_17930 0.45 +0.2 695,221 - CSW01_17930 0.46 +0.3 695,224 + CSW01_17930 0.47 +0.1 695,226 - CSW01_17930 0.47 +0.2 695,269 + CSW01_17930 0.57 +0.4 695,276 + CSW01_17930 0.59 +0.7 695,284 - CSW01_17930 0.60 +0.2 695,355 + CSW01_17930 0.77 -0.9 695,392 + CSW01_17930 0.85 -0.1 695,496 + -0.2 695,740 + -0.8 695,870 + CSW01_17935 0.20 -0.9 695,877 - CSW01_17935 0.20 -1.2 695,920 + CSW01_17935 0.24 +0.5 696,022 + CSW01_17935 0.33 -0.9 696,066 - CSW01_17935 0.37 -0.6 696,074 - CSW01_17935 0.37 +0.1 696,116 - CSW01_17935 0.41 +1.1 696,143 + CSW01_17935 0.43 -0.1 696,150 + CSW01_17935 0.44 +0.5 696,169 + CSW01_17935 0.45 -1.3 696,169 + CSW01_17935 0.45 +0.3 696,169 + CSW01_17935 0.45 +0.1 696,185 + CSW01_17935 0.47 -0.0 696,203 - CSW01_17935 0.48 +0.1 696,218 - CSW01_17935 0.50 -1.0 696,218 - CSW01_17935 0.50 -0.5 696,352 - CSW01_17935 0.61 -0.8 696,402 - CSW01_17935 0.66 +0.4 696,447 - CSW01_17935 0.70 +0.5
Or see this region's nucleotide sequence