Experiment: LB_0.5%bileacids_aerobic_120MIN_ZN11A
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CSW01_14635 and CSW01_14640 are separated by 147 nucleotides CSW01_14640 and CSW01_14645 are separated by 283 nucleotides CSW01_14645 and CSW01_14650 are separated by 26 nucleotides
CSW01_14635: CSW01_14635 - hypothetical protein, at 140,629 to 140,997
_14635
CSW01_14640: CSW01_14640 - DUF3012 domain-containing protein, at 141,145 to 141,405
_14640
CSW01_14645: CSW01_14645 - D-ribose pyranase, at 141,689 to 142,108
_14645
CSW01_14650: CSW01_14650 - ribose import ATP-binding protein RbsA, at 142,135 to 143,637
_14650
Position (kb) 141
142
143 Strain fitness (log2 ratio) -2
-1
0
1 at 140.972 kb on + strand at 140.991 kb on - strand at 141.158 kb on - strand at 141.160 kb on - strand at 141.197 kb on + strand, within CSW01_14640 at 141.197 kb on + strand, within CSW01_14640 at 141.197 kb on + strand, within CSW01_14640 at 141.197 kb on + strand, within CSW01_14640 at 141.197 kb on + strand, within CSW01_14640 at 141.197 kb on + strand, within CSW01_14640 at 141.197 kb on + strand, within CSW01_14640 at 141.198 kb on - strand, within CSW01_14640 at 141.205 kb on - strand, within CSW01_14640 at 141.205 kb on - strand, within CSW01_14640 at 141.205 kb on - strand, within CSW01_14640 at 141.205 kb on - strand, within CSW01_14640 at 141.205 kb on - strand, within CSW01_14640 at 141.205 kb on - strand, within CSW01_14640 at 141.242 kb on + strand, within CSW01_14640 at 141.265 kb on - strand, within CSW01_14640 at 141.291 kb on - strand, within CSW01_14640 at 141.348 kb on - strand, within CSW01_14640 at 141.374 kb on - strand, within CSW01_14640 at 141.473 kb on - strand at 141.473 kb on - strand at 141.490 kb on + strand at 141.557 kb on - strand at 141.666 kb on - strand at 141.704 kb on + strand at 141.704 kb on + strand at 141.711 kb on + strand at 141.719 kb on - strand at 141.719 kb on - strand at 141.738 kb on + strand, within CSW01_14645 at 141.830 kb on - strand, within CSW01_14645 at 141.926 kb on - strand, within CSW01_14645 at 141.931 kb on - strand, within CSW01_14645 at 141.935 kb on + strand, within CSW01_14645 at 141.943 kb on - strand, within CSW01_14645 at 141.943 kb on - strand, within CSW01_14645 at 141.957 kb on + strand, within CSW01_14645 at 141.957 kb on - strand, within CSW01_14645 at 142.028 kb on + strand, within CSW01_14645 at 142.028 kb on + strand, within CSW01_14645 at 142.028 kb on + strand, within CSW01_14645 at 142.028 kb on + strand, within CSW01_14645 at 142.028 kb on + strand, within CSW01_14645 at 142.028 kb on + strand, within CSW01_14645 at 142.036 kb on - strand, within CSW01_14645 at 142.036 kb on - strand, within CSW01_14645 at 142.036 kb on - strand, within CSW01_14645 at 142.049 kb on - strand, within CSW01_14645 at 142.067 kb on + strand at 142.075 kb on - strand at 142.075 kb on - strand at 142.119 kb on + strand at 142.192 kb on + strand at 142.192 kb on + strand at 142.200 kb on - strand at 142.200 kb on - strand at 142.223 kb on - strand at 142.316 kb on + strand, within CSW01_14650 at 142.324 kb on - strand, within CSW01_14650 at 142.385 kb on - strand, within CSW01_14650 at 142.455 kb on + strand, within CSW01_14650 at 142.512 kb on - strand, within CSW01_14650 at 142.512 kb on - strand, within CSW01_14650 at 142.530 kb on + strand, within CSW01_14650 at 142.536 kb on - strand, within CSW01_14650 at 142.536 kb on - strand, within CSW01_14650 at 142.540 kb on + strand, within CSW01_14650 at 142.563 kb on + strand, within CSW01_14650 at 142.566 kb on - strand, within CSW01_14650 at 142.654 kb on + strand, within CSW01_14650 at 142.677 kb on + strand, within CSW01_14650 at 142.720 kb on + strand, within CSW01_14650 at 142.766 kb on + strand, within CSW01_14650 at 142.769 kb on + strand, within CSW01_14650 at 142.875 kb on - strand, within CSW01_14650 at 142.886 kb on - strand, within CSW01_14650 at 142.896 kb on + strand, within CSW01_14650 at 142.902 kb on + strand, within CSW01_14650 at 142.915 kb on - strand, within CSW01_14650 at 142.915 kb on - strand, within CSW01_14650 at 142.936 kb on + strand, within CSW01_14650 at 142.944 kb on - strand, within CSW01_14650 at 142.944 kb on - strand, within CSW01_14650 at 142.993 kb on - strand, within CSW01_14650 at 142.995 kb on + strand, within CSW01_14650 at 142.995 kb on + strand, within CSW01_14650 at 143.003 kb on - strand, within CSW01_14650 at 143.003 kb on - strand, within CSW01_14650 at 143.005 kb on + strand, within CSW01_14650 at 143.027 kb on - strand, within CSW01_14650
Per-strain Table
Position Strand Gene LocusTag Fraction LB_0.5%bileacids_aerobic_120MIN_ZN11A remove 140,972 + +0.1 140,991 - -0.0 141,158 - -0.0 141,160 - +0.3 141,197 + CSW01_14640 0.20 +0.3 141,197 + CSW01_14640 0.20 -0.2 141,197 + CSW01_14640 0.20 +0.1 141,197 + CSW01_14640 0.20 +0.1 141,197 + CSW01_14640 0.20 -1.0 141,197 + CSW01_14640 0.20 +0.7 141,197 + CSW01_14640 0.20 +0.2 141,198 - CSW01_14640 0.20 -0.6 141,205 - CSW01_14640 0.23 +0.4 141,205 - CSW01_14640 0.23 -0.9 141,205 - CSW01_14640 0.23 -0.9 141,205 - CSW01_14640 0.23 -0.5 141,205 - CSW01_14640 0.23 -1.3 141,205 - CSW01_14640 0.23 +0.3 141,242 + CSW01_14640 0.37 +0.7 141,265 - CSW01_14640 0.46 -0.2 141,291 - CSW01_14640 0.56 +0.0 141,348 - CSW01_14640 0.78 -1.7 141,374 - CSW01_14640 0.88 -0.1 141,473 - -0.2 141,473 - +0.5 141,490 + -0.2 141,557 - +0.1 141,666 - +0.5 141,704 + -1.1 141,704 + +0.3 141,711 + -1.9 141,719 - +0.1 141,719 - -0.9 141,738 + CSW01_14645 0.12 -1.0 141,830 - CSW01_14645 0.34 +0.8 141,926 - CSW01_14645 0.56 -0.2 141,931 - CSW01_14645 0.58 -0.3 141,935 + CSW01_14645 0.59 -0.3 141,943 - CSW01_14645 0.60 -0.3 141,943 - CSW01_14645 0.60 +0.3 141,957 + CSW01_14645 0.64 -0.0 141,957 - CSW01_14645 0.64 -0.2 142,028 + CSW01_14645 0.81 -0.0 142,028 + CSW01_14645 0.81 -0.8 142,028 + CSW01_14645 0.81 -1.2 142,028 + CSW01_14645 0.81 -0.0 142,028 + CSW01_14645 0.81 +0.6 142,028 + CSW01_14645 0.81 +0.2 142,036 - CSW01_14645 0.83 -0.5 142,036 - CSW01_14645 0.83 -0.4 142,036 - CSW01_14645 0.83 -0.7 142,049 - CSW01_14645 0.86 -1.2 142,067 + +1.0 142,075 - -1.6 142,075 - -0.5 142,119 + +0.1 142,192 + +0.2 142,192 + -0.2 142,200 - -0.5 142,200 - -0.6 142,223 - -0.3 142,316 + CSW01_14650 0.12 -0.2 142,324 - CSW01_14650 0.13 +0.7 142,385 - CSW01_14650 0.17 -0.5 142,455 + CSW01_14650 0.21 +0.2 142,512 - CSW01_14650 0.25 -0.7 142,512 - CSW01_14650 0.25 +0.0 142,530 + CSW01_14650 0.26 +0.5 142,536 - CSW01_14650 0.27 -1.2 142,536 - CSW01_14650 0.27 +0.5 142,540 + CSW01_14650 0.27 +0.1 142,563 + CSW01_14650 0.28 +1.3 142,566 - CSW01_14650 0.29 +0.3 142,654 + CSW01_14650 0.35 +0.2 142,677 + CSW01_14650 0.36 -0.3 142,720 + CSW01_14650 0.39 +0.0 142,766 + CSW01_14650 0.42 -0.7 142,769 + CSW01_14650 0.42 -0.4 142,875 - CSW01_14650 0.49 +0.2 142,886 - CSW01_14650 0.50 +0.3 142,896 + CSW01_14650 0.51 +0.3 142,902 + CSW01_14650 0.51 -0.0 142,915 - CSW01_14650 0.52 -1.3 142,915 - CSW01_14650 0.52 -0.7 142,936 + CSW01_14650 0.53 -0.9 142,944 - CSW01_14650 0.54 +0.1 142,944 - CSW01_14650 0.54 +0.5 142,993 - CSW01_14650 0.57 +0.1 142,995 + CSW01_14650 0.57 -0.1 142,995 + CSW01_14650 0.57 +0.2 143,003 - CSW01_14650 0.58 -0.0 143,003 - CSW01_14650 0.58 -0.4 143,005 + CSW01_14650 0.58 -0.1 143,027 - CSW01_14650 0.59 -0.3
Or see this region's nucleotide sequence