Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_04800

Experiment: LB_0.5%bileacids_aerobic_120MIN_ZN11A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB_0.5%bileacids_aerobic_120MIN_ZN11A
1,000,208	-		CSW01_04790	0.63	-0.5
1,000,224	-		CSW01_04790	0.65	+0.6
1,000,300	+		CSW01_04790	0.71	+1.0
1,000,313	+		CSW01_04790	0.72	-0.9
1,000,313	+		CSW01_04790	0.72	-1.7
1,000,321	-		CSW01_04790	0.73	-0.3
1,000,321	-		CSW01_04790	0.73	-0.7
1,000,446	+		CSW01_04790	0.83	-0.5
1,000,474	-		CSW01_04790	0.86	-1.7
1,000,546	+				+2.8
1,000,554	-				+0.0
1,000,554	-				+0.1
1,000,601	-				-0.2
1,000,606	+				+0.3
1,000,624	+				+0.5
1,000,641	+				-2.1
1,000,648	-				+0.4
1,000,649	-				-0.9
1,000,689	-				-0.6
1,000,915	+		CSW01_04795	0.50	-0.1
1,000,915	+		CSW01_04795	0.50	+0.3
1,000,915	+		CSW01_04795	0.50	-0.1
1,000,915	+		CSW01_04795	0.50	-0.4
1,000,915	+		CSW01_04795	0.50	-0.3
1,000,915	+		CSW01_04795	0.50	-0.2
1,000,916	+		CSW01_04795	0.50	+1.3
1,000,923	-		CSW01_04795	0.52	-0.6
1,000,923	-		CSW01_04795	0.52	-0.4
1,000,923	-		CSW01_04795	0.52	-0.1
1,000,923	-		CSW01_04795	0.52	+0.1
1,000,923	-		CSW01_04795	0.52	+0.3
1,000,923	-		CSW01_04795	0.52	-0.7
1,000,923	-		CSW01_04795	0.52	+1.1
1,000,923	-		CSW01_04795	0.52	-0.3
1,000,979	+		CSW01_04795	0.62	+0.3
1,000,987	-		CSW01_04795	0.64	+1.2
1,001,041	+		CSW01_04795	0.74	+0.5
1,001,078	+		CSW01_04795	0.81	+0.4
1,001,103	+		CSW01_04795	0.86	+1.4
1,001,185	+				-1.2
1,001,185	+				-0.1
1,001,193	-				+1.3
1,001,247	-				+1.1
1,001,310	+				-0.2
1,001,310	+				-0.4
1,001,375	-				-0.7
1,001,387	+				+0.8
1,001,387	+				+0.9
1,001,441	-		CSW01_04800	0.11	-0.8
1,001,516	-		CSW01_04800	0.14	+0.3
1,001,564	-		CSW01_04800	0.16	-0.7
1,001,564	-		CSW01_04800	0.16	+0.9
1,001,730	+		CSW01_04800	0.24	+0.8
1,001,740	-		CSW01_04800	0.24	-0.5
1,001,748	+		CSW01_04800	0.25	-0.7
1,001,748	-		CSW01_04800	0.25	+1.0
1,001,749	+		CSW01_04800	0.25	+0.3
1,001,789	+		CSW01_04800	0.27	-0.0
1,001,797	-		CSW01_04800	0.27	+0.2
1,001,819	+		CSW01_04800	0.28	+0.1
1,001,912	-		CSW01_04800	0.32	+0.1
1,001,947	+		CSW01_04800	0.34	+0.5
1,001,979	-		CSW01_04800	0.35	-0.3
1,002,032	+		CSW01_04800	0.37	-0.4
1,002,072	+		CSW01_04800	0.39	+0.1
1,002,082	-		CSW01_04800	0.40	-1.6
1,002,187	+		CSW01_04800	0.44	-0.2
1,002,195	-		CSW01_04800	0.45	-0.4
1,002,195	-		CSW01_04800	0.45	+0.9
1,002,224	+		CSW01_04800	0.46	-0.5
1,002,224	+		CSW01_04800	0.46	-0.4
1,002,224	+		CSW01_04800	0.46	+0.2
1,002,232	-		CSW01_04800	0.47	+1.3
1,002,232	-		CSW01_04800	0.47	+0.8
1,002,232	-		CSW01_04800	0.47	-0.0
1,002,232	-		CSW01_04800	0.47	-0.0
1,002,232	-		CSW01_04800	0.47	-0.9
1,002,265	-		CSW01_04800	0.48	-0.9
1,002,339	-		CSW01_04800	0.51	+0.3
1,002,341	+		CSW01_04800	0.51	+0.5
1,002,341	+		CSW01_04800	0.51	-0.5
1,002,349	-		CSW01_04800	0.52	-0.3
1,002,354	-		CSW01_04800	0.52	-0.2
1,002,385	+		CSW01_04800	0.53	+0.3
1,002,418	-		CSW01_04800	0.55	+0.3
1,002,501	+		CSW01_04800	0.59	+0.0
1,002,509	-		CSW01_04800	0.59	+0.5
1,002,599	-		CSW01_04800	0.63	-0.1
1,002,634	+		CSW01_04800	0.65	+0.0
1,002,643	-		CSW01_04800	0.65	-0.8
1,002,644	+		CSW01_04800	0.65	+0.8
1,002,646	+		CSW01_04800	0.65	+0.1
1,002,752	+		CSW01_04800	0.70	-0.5
1,002,824	+		CSW01_04800	0.73	+1.3
1,002,829	+		CSW01_04800	0.73	-1.0
1,002,829	+		CSW01_04800	0.73	+0.2
1,002,829	+		CSW01_04800	0.73	-0.3
1,002,829	+		CSW01_04800	0.73	-0.3
1,002,832	-		CSW01_04800	0.74	+0.8
1,002,837	-		CSW01_04800	0.74	-0.2
1,002,837	-		CSW01_04800	0.74	-0.0
1,002,844	+		CSW01_04800	0.74	-1.1
1,002,870	+		CSW01_04800	0.75	+0.3
1,002,872	-		CSW01_04800	0.75	-0.1
1,002,965	-		CSW01_04800	0.80	+1.9
1,002,969	+		CSW01_04800	0.80	-0.5
1,003,006	+		CSW01_04800	0.81	-0.5
1,003,014	-		CSW01_04800	0.82	-0.5
1,003,014	-		CSW01_04800	0.82	-0.3
1,003,014	-		CSW01_04800	0.82	+1.1
1,003,014	-		CSW01_04800	0.82	-1.2
1,003,014	-		CSW01_04800	0.82	+1.3
1,003,014	-		CSW01_04800	0.82	+1.1
1,003,081	+		CSW01_04800	0.85	-1.7
1,003,081	+		CSW01_04800	0.85	+1.3
1,003,081	+		CSW01_04800	0.85	+0.8
1,003,156	-		CSW01_04800	0.88	+0.3
1,003,171	+		CSW01_04800	0.89	+1.6
1,003,171	+		CSW01_04800	0.89	+0.1
1,003,171	+		CSW01_04800	0.89	-0.4
1,003,171	+		CSW01_04800	0.89	-0.7
1,003,189	+		CSW01_04800	0.90	-0.8
1,003,274	+				-0.4
1,003,287	+				+0.5
1,003,311	+				-0.2
1,003,367	+				+0.3
1,003,463	-				-1.7
1,003,569	-		CSW01_04805	0.22	-0.9
1,003,587	+		CSW01_04805	0.25	+0.7
1,003,590	-		CSW01_04805	0.25	+0.1
1,003,595	-		CSW01_04805	0.26	+1.3
1,003,595	-		CSW01_04805	0.26	+0.0
1,003,595	-		CSW01_04805	0.26	+0.4
1,003,595	-		CSW01_04805	0.26	-0.3
1,003,614	+		CSW01_04805	0.29	-0.1
1,003,617	-		CSW01_04805	0.29	-0.6
1,003,724	+		CSW01_04805	0.44	-0.4
1,003,732	-		CSW01_04805	0.45	-0.0
1,003,734	+		CSW01_04805	0.45	+0.1
1,003,742	-		CSW01_04805	0.47	+0.1
1,003,744	+		CSW01_04805	0.47	-0.1
1,003,752	-		CSW01_04805	0.48	-0.2
1,003,754	-		CSW01_04805	0.48	-0.6
1,003,756	+		CSW01_04805	0.49	+0.3
1,003,763	-		CSW01_04805	0.50	+0.4
1,003,868	-		CSW01_04805	0.64	-0.2
1,003,869	+		CSW01_04805	0.65	+0.9
1,003,869	+		CSW01_04805	0.65	-0.1
1,003,877	-		CSW01_04805	0.66	+0.3
1,003,889	+		CSW01_04805	0.67	+0.9
1,003,897	-		CSW01_04805	0.69	-0.1
1,003,912	+		CSW01_04805	0.71	+1.3
1,003,917	+		CSW01_04805	0.71	+0.8
1,003,917	+		CSW01_04805	0.71	-0.1
1,003,925	-		CSW01_04805	0.72	+0.3
1,003,925	-		CSW01_04805	0.72	-0.5
1,003,970	+		CSW01_04805	0.79	-0.2
1,004,016	-		CSW01_04805	0.85	-0.6
1,004,041	+		CSW01_04805	0.89	-0.2
1,004,065	-				+0.0
1,004,071	-				-0.1
1,004,130	-				-0.4
1,004,211	+		CSW01_04810	0.26	+0.5
1,004,246	+		CSW01_04810	0.34	-0.2
1,004,297	+		CSW01_04810	0.46	+0.7
1,004,336	+		CSW01_04810	0.55	+0.9
1,004,336	+		CSW01_04810	0.55	-0.2
1,004,336	+		CSW01_04810	0.55	-0.3
1,004,336	+		CSW01_04810	0.55	+0.6
1,004,336	+		CSW01_04810	0.55	+0.5
1,004,336	+		CSW01_04810	0.55	-0.5
1,004,336	+		CSW01_04810	0.55	+1.3
1,004,336	+		CSW01_04810	0.55	+1.6
1,004,336	+		CSW01_04810	0.55	-1.0
1,004,344	-		CSW01_04810	0.57	+0.3
1,004,344	-		CSW01_04810	0.57	-0.1
1,004,344	-		CSW01_04810	0.57	+0.3
1,004,344	-		CSW01_04810	0.57	-0.1
1,004,344	-		CSW01_04810	0.57	-0.0
1,004,344	-		CSW01_04810	0.57	+0.1
1,004,344	-		CSW01_04810	0.57	+0.5
1,004,344	-		CSW01_04810	0.57	-0.3
1,004,344	-		CSW01_04810	0.57	-0.1
1,004,367	-		CSW01_04810	0.62	-0.3
1,004,398	+		CSW01_04810	0.69	+0.2