Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2312

Experiment: Thymine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine (N)
2,442,889	-		Dshi_2311	0.86	-0.6
2,443,024	+		Dshi_2311	0.89	-0.5
2,443,037	-		Dshi_2311	0.90	+1.3
2,443,037	-		Dshi_2311	0.90	-2.4
2,443,105	+				-0.5
2,443,113	-				-0.8
2,443,159	+				+0.4
2,443,192	+				-0.8
2,443,192	+				+0.5
2,443,198	+				+0.2
2,443,200	-				+0.3
2,443,261	+				-0.4
2,443,273	+				+0.7
2,443,280	-				-0.3
2,443,280	-				-0.6
2,443,327	-				-2.6
2,443,330	+				+0.5
2,443,330	+				-1.0
2,443,330	+				-0.9
2,443,330	+				-0.6
2,443,334	+				+0.4
2,443,334	-				-1.1
2,443,334	-				-0.4
2,443,353	-				-0.3
2,443,353	-				-0.9
2,443,367	+				+0.3
2,443,418	+				-0.8
2,443,426	-				-0.8
2,443,426	-				-0.3
2,443,428	+				-0.6
2,443,446	-				-0.0
2,443,457	-				-0.9
2,443,457	-				-0.2
2,443,458	-				+0.5
2,443,460	+				+0.4
2,443,460	+				+0.2
2,443,460	+				-0.2
2,443,460	+				-0.6
2,443,460	+				-0.8
2,443,460	+				-0.0
2,443,460	+				-1.7
2,443,460	+				-0.3
2,443,460	+				-0.5
2,443,468	-				-0.4
2,443,468	-				+0.7
2,443,468	-				-0.4
2,443,468	-				-0.2
2,443,468	-				+0.5
2,443,468	-				-1.0
2,443,468	-				-0.8
2,443,468	-				+2.7
2,443,468	-				-0.3
2,443,468	-				+1.3
2,443,468	-				-0.5
2,443,468	-				+0.8
2,443,468	-				-0.5
2,443,468	-				+0.5
2,443,468	-				+1.3
2,443,468	-				+0.2
2,443,468	-				-0.4
2,443,468	-				-0.6
2,443,468	-				-0.1
2,443,468	-				-1.0
2,443,468	-				+0.9
2,443,468	-				-1.0
2,443,468	-				-0.7
2,443,468	-				+0.2
2,443,470	+				+0.6
2,443,470	+				+0.3
2,443,470	+				-0.9
2,443,470	+				-0.2
2,443,470	+				+0.5
2,443,470	+				+0.2
2,443,472	+				-0.3
2,443,472	+				-1.8
2,443,472	+				-0.4
2,443,477	+				-2.4
2,443,478	-				-0.3
2,443,478	-				-0.0
2,443,478	-				+0.8
2,443,478	-				-0.2
2,443,478	-				-0.0
2,443,480	-				+0.2
2,443,495	+				-0.2
2,443,495	+				-1.6
2,443,503	-				+2.1
2,443,503	-				-0.7
2,443,535	-				+0.1
2,443,572	+				-0.0
2,443,572	+				-0.6
2,443,572	+				-0.6
2,443,572	+				-1.8
2,443,580	+				-0.1
2,443,580	-				+0.2
2,443,580	-				-0.4
2,443,580	-				-0.9
2,443,580	-				-0.7
2,443,580	-				+1.1
2,443,580	-				+0.1
2,443,580	-				+0.2
2,443,580	-				+0.1
2,443,580	-				+0.1
2,443,580	-				-0.8
2,443,580	-				+0.3
2,443,587	+				-0.3
2,443,587	+				-0.9
2,443,587	+				+0.7
2,443,615	+				-0.9
2,443,622	+				-1.5
2,443,623	+				+0.3
2,443,623	+				-0.2
2,443,623	+				-0.3
2,443,628	+				+0.7
2,443,630	-				-0.3
2,443,631	-				-0.9
2,443,631	-				-1.1
2,443,631	-				-2.0
2,443,631	-				-0.4
2,443,631	-				-0.4
2,443,632	+				-1.6
2,443,633	+				-0.0
2,443,633	+				-0.8
2,443,633	+				-0.0
2,443,633	+				-0.5
2,443,633	+				-0.4
2,443,633	+				-0.1
2,443,633	+				-1.1
2,443,641	-				-1.1
2,443,641	-				+0.9
2,443,641	-				-0.3
2,443,641	-				-0.1
2,443,641	-				-0.7
2,443,641	-				+0.5
2,443,641	-				-0.6
2,443,641	-				-0.3
2,443,641	-				+0.2
2,443,677	+				+1.7
2,443,677	+				+0.7
2,443,690	-				-1.8
2,443,695	-				-2.0
2,443,698	+				-1.4
2,443,709	+				-0.1
2,443,728	+				+1.7
2,443,748	-				+0.3
2,443,759	+				+0.0
2,443,759	+				-1.0
2,443,759	+				-2.7
2,443,759	+				-0.6
2,443,759	+				-0.5
2,443,767	-				-0.9
2,443,767	-				+0.7
2,443,767	-				+0.1
2,443,769	+				-0.0
2,443,772	-				-1.3
2,443,810	+				-0.7
2,443,812	+				-0.1
2,443,812	+				-0.3
2,443,812	+				-1.3
2,443,817	+				-1.3
2,443,820	-				-0.1
2,443,820	-				+0.6
2,443,825	-				-0.3
2,443,886	-				+1.4
2,443,888	+				-1.8
2,443,891	-				-0.3
2,443,895	+				+2.3
2,443,895	+				-0.3
2,443,896	-				+1.1
2,443,903	-				+0.6
2,443,931	-		Dshi_2312	0.10	-0.4
2,443,943	-		Dshi_2312	0.13	-1.2
2,443,944	-		Dshi_2312	0.13	+0.4
2,443,954	+		Dshi_2312	0.15	-2.1
2,443,968	-		Dshi_2312	0.18	-1.0
2,444,005	-		Dshi_2312	0.25	-0.8
2,444,012	+		Dshi_2312	0.26	-0.2
2,444,020	-		Dshi_2312	0.28	-2.4
2,444,025	+		Dshi_2312	0.29	-1.0
2,444,034	+		Dshi_2312	0.30	-0.6
2,444,112	+		Dshi_2312	0.46	-0.6
2,444,136	+		Dshi_2312	0.50	-0.1
2,444,146	+		Dshi_2312	0.52	+0.0
2,444,146	+		Dshi_2312	0.52	-0.5
2,444,146	+		Dshi_2312	0.52	+0.4
2,444,154	-		Dshi_2312	0.54	+0.1
2,444,154	-		Dshi_2312	0.54	+2.3
2,444,157	+		Dshi_2312	0.54	-0.4
2,444,176	-		Dshi_2312	0.58	-2.6
2,444,191	-		Dshi_2312	0.61	-0.6
2,444,229	-		Dshi_2312	0.68	+0.2
2,444,233	-		Dshi_2312	0.69	-0.5
2,444,241	-		Dshi_2312	0.71	-0.0
2,444,284	+		Dshi_2312	0.79	-1.2
2,444,286	+		Dshi_2312	0.79	-1.9
2,444,286	+		Dshi_2312	0.79	-0.7
2,444,299	-		Dshi_2312	0.82	-0.6
2,444,317	+		Dshi_2312	0.85	+0.1
2,444,334	+		Dshi_2312	0.89	-1.3
2,444,342	-				-0.3
2,444,386	-				+0.9
2,444,414	+				-0.7
2,444,414	+				-0.5
2,444,414	+				+0.6
2,444,414	+				+0.5
2,444,414	+				+0.7
2,444,414	+				-2.0
2,444,414	+				+0.7
2,444,414	+				-0.0
2,444,414	+				-0.3
2,444,414	+				-0.1
2,444,414	+				+1.1
2,444,416	+				-1.9
2,444,419	+				+0.7
2,444,422	-				+0.7
2,444,422	-				-1.3
2,444,422	-				-0.2
2,444,422	-				+0.5
2,444,422	-				+0.2
2,444,422	-				-1.2
2,444,422	-				+0.1
2,444,422	-				-0.2
2,444,422	-				-0.4
2,444,422	-				-0.8
2,444,422	-				-1.3
2,444,422	-				-1.6
2,444,422	-				-0.9
2,444,422	-				-1.0
2,444,422	-				+1.5
2,444,422	-				+0.4
2,444,422	-				-1.1
2,444,435	-				-0.6
2,444,446	-				-0.1
2,444,495	-				-0.6
2,444,500	-				+0.5
2,444,501	-				-0.9
2,444,700	+				+0.7
2,444,797	-		Dshi_2313	0.12	+0.6
2,444,812	-		Dshi_2313	0.14	+1.4
2,444,828	-		Dshi_2313	0.16	+0.1
2,444,887	-		Dshi_2313	0.24	-0.6
2,444,910	+		Dshi_2313	0.27	-0.4
2,444,918	-		Dshi_2313	0.28	+0.3
2,444,918	-		Dshi_2313	0.28	-1.2
2,445,031	+		Dshi_2313	0.44	+0.8
2,445,124	-		Dshi_2313	0.57	-2.1
2,445,124	-		Dshi_2313	0.57	+0.3
2,445,161	+		Dshi_2313	0.62	+1.3
2,445,180	-		Dshi_2313	0.65	+0.7
2,445,209	-		Dshi_2313	0.69	-1.8