Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08705

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,628,961	-				-1.3
1,628,988	+				-0.1
1,629,125	+				+0.7
1,629,442	-		MMP_RS08700	0.30	+1.8
1,629,490	-		MMP_RS08700	0.37	+1.3
1,629,491	+		MMP_RS08700	0.37	-1.1
1,629,495	+		MMP_RS08700	0.38	+1.1
1,629,532	+		MMP_RS08700	0.43	-1.8
1,629,559	-		MMP_RS08700	0.47	+1.0
1,629,561	-		MMP_RS08700	0.48	+1.0
1,629,691	-		MMP_RS08700	0.67	-0.1
1,629,691	-		MMP_RS08700	0.67	-0.4
1,629,692	+		MMP_RS08700	0.67	+1.1
1,629,701	+		MMP_RS08700	0.68	+0.5
1,629,864	+				+1.1
1,629,917	+				+1.3
1,629,965	+				-1.7
1,629,979	-				-2.6
1,630,030	-		MMP_RS08705	0.18	-2.6
1,630,031	+		MMP_RS08705	0.18	-2.5
1,630,094	+		MMP_RS08705	0.29	+0.6
1,630,143	-		MMP_RS08705	0.38	+0.4
1,630,144	+		MMP_RS08705	0.38	-2.6
1,630,283	+		MMP_RS08705	0.63	-2.2
1,630,291	-		MMP_RS08705	0.65	-3.1
1,630,419	-		MMP_RS08705	0.87	-0.9
1,630,420	+		MMP_RS08705	0.88	+1.5
1,630,488	-				-0.2
1,630,492	+				+0.2
1,630,521	+				-1.1
1,630,609	-				+0.5
1,630,610	+				-1.1
1,630,626	-				-2.1
1,630,626	-				-0.6
1,630,627	+				-1.0
1,630,627	+				+0.6
1,630,627	+				+1.3
1,630,652	-				+0.9
1,630,655	+				-1.0
1,630,661	-				-0.4
1,630,997	+				+1.7
1,630,999	+				-3.2
1,631,132	-				+0.8
1,631,149	-				-0.8
1,631,168	-				-1.7
1,631,180	+				-0.6
1,631,215	-				+1.2
1,631,216	+				+0.5
1,631,216	+				+2.5
1,631,265	+				-1.8
1,631,282	-				+0.2
1,631,287	-				+0.6