Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08235

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,549,088	-		MMP_RS08230	0.33	-0.4
1,549,144	-		MMP_RS08230	0.40	-0.8
1,549,145	+		MMP_RS08230	0.40	+1.7
1,549,287	-		MMP_RS08230	0.59	+0.3
1,549,303	+		MMP_RS08230	0.61	-1.4
1,549,333	-		MMP_RS08230	0.64	+1.1
1,549,351	+		MMP_RS08230	0.67	-0.2
1,549,369	-		MMP_RS08230	0.69	+1.0
1,549,370	+		MMP_RS08230	0.69	-2.3
1,549,398	+		MMP_RS08230	0.73	+0.5
1,549,538	-				+0.6
1,549,563	-				-0.2
1,549,576	-				-1.7
1,549,576	-				+0.6
1,549,577	+				+0.3
1,549,577	+				+2.1
1,549,656	+				-3.8
1,549,657	-				+1.2
1,549,657	-				-0.5
1,549,658	+				+0.6
1,549,658	+				+0.0
1,549,658	+				-2.6
1,549,658	+				-0.5
1,549,658	+				+1.6
1,549,714	-				-1.6
1,549,750	+		MMP_RS08235	0.14	-0.1
1,549,845	-		MMP_RS08235	0.56	+0.3
1,549,846	+		MMP_RS08235	0.57	-0.5
1,549,892	-		MMP_RS08235	0.77	-1.3
1,549,893	+		MMP_RS08235	0.77	-0.9
1,549,945	+				+0.5
1,549,975	+				+0.6
1,550,017	+				-2.8
1,550,062	-				-1.0
1,550,063	+				-1.4
1,550,082	+				+1.4
1,550,090	+				-0.9
1,550,123	-				+1.4
1,550,165	-				+0.4
1,550,171	+				+1.3
1,550,175	+				-0.2
1,550,237	+				-0.8
1,550,240	+				+1.3
1,550,257	-				-1.7
1,550,496	-		MMP_RS08240	0.23	+1.5
1,550,678	+		MMP_RS08240	0.39	-2.0
1,550,743	-		MMP_RS08240	0.44	+0.1
1,550,901	-		MMP_RS08240	0.58	-0.4