Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07420

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,412,619	+				+0.9
1,412,654	-				-0.4
1,412,654	-				-1.0
1,412,657	+				+1.0
1,412,672	+				-0.2
1,412,675	-				+1.6
1,412,679	+				+1.2
1,412,682	-				+1.1
1,412,691	-				+1.1
1,412,696	-				+2.1
1,412,696	-				-1.5
1,412,705	-				+0.5
1,412,705	-				-1.3
1,412,741	+				+1.4
1,412,741	+				-0.3
1,412,745	+				-0.3
1,412,745	+				+0.0
1,412,750	+				+0.4
1,412,763	-				+1.4
1,412,763	-				+0.7
1,412,763	-				+0.1
1,413,055	-		MMP_RS07415	0.44	+1.6
1,413,067	+		MMP_RS07415	0.46	-2.0
1,413,073	+		MMP_RS07415	0.47	+1.9
1,413,195	+		MMP_RS07415	0.64	-1.8
1,413,297	-		MMP_RS07415	0.79	+0.9
1,413,365	+		MMP_RS07415	0.89	+0.4
1,413,365	+		MMP_RS07415	0.89	-1.7
1,413,366	-		MMP_RS07415	0.89	+0.2
1,413,378	-				+1.7
1,413,379	+				+1.1
1,413,379	+				+1.3
1,413,445	+				-3.7
1,413,475	-				+0.4
1,413,526	+				-3.1
1,413,527	-				-3.1
1,413,557	-				+1.2
1,413,571	-				-0.5
1,413,615	-		MMP_RS07420	0.23	-0.2
1,413,616	+		MMP_RS07420	0.23	-1.0
1,413,639	+		MMP_RS07420	0.31	-1.2
1,413,654	-		MMP_RS07420	0.36	-2.0
1,413,775	-		MMP_RS07420	0.78	+0.4
1,413,778	-		MMP_RS07420	0.79	-0.5
1,413,778	-		MMP_RS07420	0.79	+1.2
1,413,779	+		MMP_RS07420	0.80	-1.0
1,413,779	+		MMP_RS07420	0.80	-0.7
1,413,785	-		MMP_RS07420	0.82	+0.3
1,413,797	-		MMP_RS07420	0.86	+0.5
1,413,810	+				+0.5
1,413,813	-				+0.4
1,413,813	-				+1.2
1,413,813	-				+0.5
1,413,814	+				-3.6
1,413,814	+				-0.8
1,413,814	+				-0.3
1,413,814	+				-1.0
1,413,814	+				-1.8
1,413,817	+				+1.4
1,413,875	-				+1.2
1,413,877	-				+0.5
1,413,877	-				+1.7
1,413,877	-				-2.1
1,413,896	-				-1.0
1,413,897	+				-0.5
1,413,897	+				-0.9
1,413,898	-				-1.2
1,413,898	-				-0.2
1,413,899	+				-0.9
1,413,919	+				-2.5
1,414,074	+				-0.3
1,414,076	-				-3.3
1,414,089	-				-0.5
1,414,089	-				-2.7
1,414,090	+				-2.2
1,414,138	+				-1.0
1,414,279	+		MMP_RS07425	0.22	-1.1
1,414,451	-		MMP_RS07425	0.38	-0.1
1,414,452	+		MMP_RS07425	0.38	-0.2
1,414,633	+		MMP_RS07425	0.54	+0.6
1,414,683	+		MMP_RS07425	0.59	+0.3
1,414,685	-		MMP_RS07425	0.59	+0.7
1,414,836	+		MMP_RS07425	0.72	-1.4