Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06650

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,272,953	+				+1.0
1,273,058	+				-0.0
1,273,250	+				-0.5
1,273,365	-				+0.3
1,273,366	+				-1.4
1,273,466	-				-0.4
1,273,467	+				+0.3
1,273,712	-				+0.9
1,273,737	-				+1.1
1,273,878	-		MMP_RS06650	0.12	+0.8
1,273,912	+		MMP_RS06650	0.15	-1.4
1,273,925	-		MMP_RS06650	0.16	-1.0
1,273,926	+		MMP_RS06650	0.16	-2.4
1,273,977	-		MMP_RS06650	0.20	+1.1
1,274,111	+		MMP_RS06650	0.31	+0.2
1,274,182	+		MMP_RS06650	0.37	+1.2
1,274,258	+		MMP_RS06650	0.43	-2.8
1,274,342	+		MMP_RS06650	0.50	+0.9
1,274,388	+		MMP_RS06650	0.54	+1.3
1,274,438	+		MMP_RS06650	0.58	-1.3
1,274,527	-		MMP_RS06650	0.65	-0.4
1,274,561	-		MMP_RS06650	0.68	-0.3
1,274,585	+		MMP_RS06650	0.70	-2.1
1,274,741	+		MMP_RS06650	0.83	+0.7
1,274,743	-		MMP_RS06650	0.83	+0.2
1,274,809	+		MMP_RS06650	0.88	-0.7
1,274,816	+		MMP_RS06650	0.89	+1.2
1,274,974	-				+0.6
1,274,975	+				-2.7
1,274,975	+				-0.8
1,274,990	-				-1.8
1,274,993	-				-1.1
1,274,996	-				-0.9
1,274,999	-				+1.5
1,274,999	-				+2.6
1,275,002	+				+0.1
1,275,002	+				+1.8
1,275,003	-				+0.0
1,275,004	+				+1.2
1,275,004	+				+0.6
1,275,004	+				+1.7
1,275,006	-				+0.6
1,275,007	+				+0.3
1,275,007	+				-1.7
1,275,007	+				-0.7
1,275,013	-				-1.7
1,275,029	-				-2.7
1,275,056	-				-0.5
1,275,119	-				-0.5
1,275,120	+				+0.6
1,275,150	-				-2.2
1,275,154	-				+0.6
1,275,155	+				-0.8
1,275,155	+				-1.9
1,275,223	-		MMP_RS06655	0.11	+1.5
1,275,435	+		MMP_RS06655	0.22	+0.5
1,275,436	-		MMP_RS06655	0.22	-1.1
1,275,853	+		MMP_RS06655	0.45	+0.3