Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06475

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,241,945	+				-2.3
1,241,988	+				-0.2
1,241,991	+				-2.1
1,241,992	-				-0.5
1,241,992	-				-1.3
1,241,993	+				-0.5
1,241,999	-				-1.5
1,242,025	-				-2.6
1,242,028	+				-0.2
1,242,031	+				-2.1
1,242,230	-		MMP_RS06475	0.10	-1.0
1,242,260	+		MMP_RS06475	0.13	-1.4
1,242,333	-		MMP_RS06475	0.18	-2.0
1,242,461	-		MMP_RS06475	0.28	+0.6
1,242,465	+		MMP_RS06475	0.28	-2.4
1,242,578	-		MMP_RS06475	0.37	-2.3
1,242,604	+		MMP_RS06475	0.39	-0.7
1,242,641	+		MMP_RS06475	0.41	+0.4
1,242,909	+		MMP_RS06475	0.61	-1.5
1,242,909	+		MMP_RS06475	0.61	-1.1
1,242,974	-		MMP_RS06475	0.66	-1.3
1,242,977	-		MMP_RS06475	0.67	+1.6
1,243,477	+				-1.9
1,243,571	-				+1.2
1,243,610	-				-3.5
1,243,615	-				+0.2
1,243,616	+				+1.2
1,243,679	+				-1.6
1,243,951	-		MMP_RS06480	0.26	-3.2
1,244,081	+		MMP_RS06480	0.38	+1.9
1,244,137	-		MMP_RS06480	0.43	-2.7
1,244,137	-		MMP_RS06480	0.43	+1.2
1,244,218	+		MMP_RS06480	0.50	+1.3
1,244,269	+		MMP_RS06480	0.54	+0.5
1,244,320	-		MMP_RS06480	0.58	-0.1
1,244,404	-		MMP_RS06480	0.66	+1.2