Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05910

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,133,890	+				+0.9
1,134,202	+		MMP_RS05905	0.44	-0.1
1,134,227	-		MMP_RS05905	0.47	+0.6
1,134,246	+		MMP_RS05905	0.50	-0.8
1,134,349	+		MMP_RS05905	0.63	-1.6
1,134,359	-		MMP_RS05905	0.65	-0.0
1,134,402	-		MMP_RS05905	0.70	+0.4
1,134,402	-		MMP_RS05905	0.70	+0.3
1,134,435	-		MMP_RS05905	0.75	-1.1
1,134,547	+		MMP_RS05905	0.90	+0.4
1,134,587	-				-3.2
1,134,643	+				-1.5
1,134,643	+				+0.6
1,134,664	-				-3.3
1,134,665	+				+0.3
1,134,667	-				-1.1
1,134,668	+				+1.3
1,134,679	-				+2.1
1,134,680	+				+0.6
1,134,702	-				+1.5
1,134,710	-				-0.3
1,134,730	-				-0.1
1,134,730	-				-0.4
1,134,731	+				-1.8
1,134,737	-				-0.1
1,135,181	-		MMP_RS05910	0.51	-2.0
1,135,322	-		MMP_RS05910	0.69	-1.2
1,135,444	-		MMP_RS05910	0.84	-2.2
1,135,461	+		MMP_RS05910	0.87	+0.5
1,135,592	-				+2.0
1,135,593	+				-2.4
1,135,801	+				-2.9
1,136,151	-				-2.0
1,136,318	-				+1.5
1,136,318	-				-1.8
1,136,487	+				-1.0
1,136,552	-				-1.5
1,136,553	+				-0.8