Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05820

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,116,029	+				+0.3
1,116,048	+				+0.6
1,116,055	-				-2.1
1,116,192	-		MMP_RS05815	0.14	-1.0
1,116,193	+		MMP_RS05815	0.14	-0.1
1,116,680	-		MMP_RS05815	0.75	-0.9
1,116,909	+				+1.4
1,116,909	+				+2.3
1,117,142	-				+1.4
1,117,543	+		MMP_RS05820	0.28	-0.2
1,117,552	+		MMP_RS05820	0.29	-2.2
1,117,597	-		MMP_RS05820	0.31	-1.4
1,117,727	+		MMP_RS05820	0.37	+0.0
1,118,160	-		MMP_RS05820	0.57	-1.4
1,118,207	+		MMP_RS05820	0.59	+0.3
1,118,415	-		MMP_RS05820	0.69	-1.9
1,118,415	-		MMP_RS05820	0.69	-3.0
1,118,429	-		MMP_RS05820	0.70	+1.6
1,118,513	-		MMP_RS05820	0.74	-1.0
1,118,633	-		MMP_RS05820	0.79	+0.4
1,118,634	+		MMP_RS05820	0.79	-3.5
1,118,642	+		MMP_RS05820	0.80	+0.1
1,118,903	-				+0.0
1,118,963	-				+0.6
1,118,964	+				-2.7
1,118,983	-				-1.1
1,118,983	-				-1.6
1,119,095	-				-0.6
1,119,099	-				-0.5
1,119,100	+				+1.8
1,119,145	-				+0.1
1,119,145	-				+2.2
1,119,285	+		MMP_RS05825	0.29	-2.8
1,119,539	+		MMP_RS05825	0.71	-1.5
1,119,608	+		MMP_RS05825	0.82	+0.3
1,119,649	+		MMP_RS05825	0.89	+0.8
1,119,786	-				-2.1
1,119,787	+				-0.3
1,119,941	-		MMP_RS05830	0.37	-0.0
1,119,973	+		MMP_RS05830	0.44	+0.0