Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05685

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,091,696	+		MMP_RS05675	0.79	-2.3
1,091,780	-				+1.0
1,091,833	+				+1.1
1,091,979	-				+1.1
1,092,008	-		MMP_RS05680	0.10	+0.3
1,092,039	-		MMP_RS05680	0.15	-0.6
1,092,039	-		MMP_RS05680	0.15	-1.5
1,092,042	+		MMP_RS05680	0.15	-1.9
1,092,253	+		MMP_RS05680	0.45	+0.6
1,092,291	-		MMP_RS05680	0.51	-1.1
1,092,385	-		MMP_RS05680	0.64	+1.3
1,092,397	+		MMP_RS05680	0.66	-2.1
1,092,414	+		MMP_RS05680	0.68	-1.2
1,092,414	+		MMP_RS05680	0.68	-1.5
1,092,416	+		MMP_RS05680	0.69	+1.7
1,092,445	+		MMP_RS05680	0.73	+1.7
1,092,505	-		MMP_RS05680	0.81	-1.2
1,092,505	-		MMP_RS05680	0.81	+0.8
1,092,506	+		MMP_RS05680	0.81	+0.5
1,092,546	-		MMP_RS05680	0.87	+1.4
1,092,547	+		MMP_RS05680	0.87	-2.4
1,092,558	-		MMP_RS05680	0.89	+0.3
1,092,602	-				-3.0
1,092,644	+				+0.6
1,092,686	-		MMP_RS05685	0.13	+1.8
1,092,857	-		MMP_RS05685	0.55	-0.1
1,092,859	-		MMP_RS05685	0.55	-0.1
1,092,859	-		MMP_RS05685	0.55	-0.2
1,092,859	-		MMP_RS05685	0.55	-0.6
1,092,860	+		MMP_RS05685	0.56	+1.4
1,092,860	+		MMP_RS05685	0.56	+1.3
1,092,953	+		MMP_RS05685	0.78	+0.9
1,092,954	-		MMP_RS05685	0.79	+2.0
1,092,958	-		MMP_RS05685	0.80	+0.6
1,092,987	-		MMP_RS05685	0.87	+2.1
1,093,061	-				+0.1
1,093,063	-				+1.1
1,093,064	+				+0.5
1,093,087	+				+1.8
1,093,100	+				-2.4
1,093,100	+				+0.3
1,093,131	+				-2.1
1,093,131	+				+1.7
1,093,133	+				+1.2
1,093,147	-				-1.3
1,093,147	-				+1.7
1,093,148	+				+1.3
1,093,148	+				-0.3
1,093,179	-				+1.1
1,093,302	-				+0.6
1,093,302	-				-1.9
1,093,549	+				-1.5
1,094,003	-				-1.1