Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05675

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,090,155	-				+1.3
1,090,167	+				+0.3
1,090,254	-				+0.8
1,090,288	+				+0.0
1,090,297	+				+2.3
1,090,500	-		MMP_RS05670	0.33	+0.6
1,090,500	-		MMP_RS05670	0.33	+1.1
1,090,502	-		MMP_RS05670	0.33	+0.5
1,090,502	-		MMP_RS05670	0.33	-3.2
1,090,503	+		MMP_RS05670	0.33	+1.3
1,090,514	-		MMP_RS05670	0.35	-2.5
1,090,655	+		MMP_RS05670	0.51	-1.0
1,090,659	-		MMP_RS05670	0.51	-1.0
1,090,683	-		MMP_RS05670	0.54	-0.4
1,090,910	+		MMP_RS05670	0.80	+0.4
1,090,913	+		MMP_RS05670	0.81	+1.1
1,090,934	+		MMP_RS05670	0.83	-0.7
1,090,941	+		MMP_RS05670	0.84	+1.6
1,090,941	+		MMP_RS05670	0.84	-3.5
1,090,941	+		MMP_RS05670	0.84	-1.3
1,090,964	+		MMP_RS05670	0.87	-2.5
1,091,025	-				-0.4
1,091,032	-				+0.4
1,091,078	-				-1.0
1,091,166	+				+1.2
1,091,168	+				+0.4
1,091,605	-		MMP_RS05675	0.67	-1.7
1,091,696	+		MMP_RS05675	0.79	-2.3
1,091,780	-				+1.0
1,091,833	+				+1.1
1,091,979	-				+1.1
1,092,008	-		MMP_RS05680	0.10	+0.3
1,092,039	-		MMP_RS05680	0.15	-0.6
1,092,039	-		MMP_RS05680	0.15	-1.5
1,092,042	+		MMP_RS05680	0.15	-1.9
1,092,253	+		MMP_RS05680	0.45	+0.6
1,092,291	-		MMP_RS05680	0.51	-1.1
1,092,385	-		MMP_RS05680	0.64	+1.3
1,092,397	+		MMP_RS05680	0.66	-2.1
1,092,414	+		MMP_RS05680	0.68	-1.2
1,092,414	+		MMP_RS05680	0.68	-1.5
1,092,416	+		MMP_RS05680	0.69	+1.7
1,092,445	+		MMP_RS05680	0.73	+1.7
1,092,505	-		MMP_RS05680	0.81	-1.2
1,092,505	-		MMP_RS05680	0.81	+0.8
1,092,506	+		MMP_RS05680	0.81	+0.5
1,092,546	-		MMP_RS05680	0.87	+1.4
1,092,547	+		MMP_RS05680	0.87	-2.4
1,092,558	-		MMP_RS05680	0.89	+0.3
1,092,602	-				-3.0
1,092,644	+				+0.6
1,092,686	-		MMP_RS05685	0.13	+1.8