Strain Fitness in Methanococcus maripaludis S2 around MMP_RS03315

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
622,838	+				-2.1
623,036	-				-2.1
623,247	-				-1.0
623,421	-				+0.7
623,462	-				+0.8
623,473	+				-0.7
623,497	+				-0.9
623,504	+				+0.2
623,517	-				+0.9
623,693	-		MMP_RS03315	0.78	-0.8
623,702	-		MMP_RS03315	0.82	-0.6
623,704	-		MMP_RS03315	0.83	-1.3
623,755	-				+0.1
623,755	-				-0.2
623,756	+				-0.6
623,822	-				-1.2
623,823	+				-1.1
623,823	+				-1.6
623,824	-				-3.5
623,826	-				-0.2
623,826	-				+1.6
623,826	-				+0.6
623,826	-				-1.3
623,826	-				-3.3
623,826	-				-0.0
623,827	+				-0.4
623,828	-				+0.9
623,828	-				+1.6
623,828	-				-0.5
623,887	-				-0.0
623,897	-		MMP_RS03320	0.12	+1.0
623,901	+		MMP_RS03320	0.13	+0.0
623,909	-		MMP_RS03320	0.15	-0.4
624,012	-		MMP_RS03320	0.40	+0.2
624,023	-		MMP_RS03320	0.43	-0.2
624,287	-				-0.2
624,288	+				+0.3
624,318	+				+0.9
624,365	-				-1.0
624,365	-				+0.8
624,365	-				+1.0
624,365	-				+0.7
624,366	+				-2.7
624,367	-				-0.6
624,368	+				+0.3
624,376	-				-1.1
624,377	+				-2.1
624,377	+				+0.4
624,377	+				+1.3
624,381	+				-1.5
624,400	-				+0.8
624,401	+				+1.2
624,401	+				+0.8
624,411	-				+0.9
624,414	-				+1.1
624,415	+				+1.6
624,434	-				-2.5
624,462	+				-0.7
624,535	-				-0.8
624,593	+		MMP_RS03325	0.14	+0.0
624,593	+		MMP_RS03325	0.14	+0.5