Strain Fitness in Methanococcus maripaludis S2 around MMP_RS02475

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
463,140	-		MMP_RS02465	0.85	+1.2
463,145	-		MMP_RS02465	0.86	-1.5
463,275	-				+1.0
463,276	+				-1.3
463,276	+				+0.8
463,277	-				+0.4
463,375	+				+0.3
463,380	-				-0.0
463,387	-				-1.3
463,388	+				-0.0
463,404	-				+2.0
463,404	-				+0.0
463,457	-				-0.7
463,457	-				+0.8
463,457	-				-0.7
463,476	-				-2.0
463,481	-				+0.1
463,499	-				-1.0
463,509	-				-0.6
463,510	+				+0.6
463,517	-				-0.8
463,517	-				+1.0
463,527	-				+1.3
463,531	-				-1.5
463,532	+				-0.3
463,532	+				-1.9
463,547	-				-1.9
463,551	-				+0.9
463,551	-				+0.7
463,551	-				-0.7
463,637	+				+2.4
463,676	+		MMP_RS02470	0.18	-0.3
463,819	-		MMP_RS02470	0.57	-0.2
464,000	+				+1.6
464,009	-				+0.6
464,009	-				-1.1
464,009	-				-2.6
464,010	+				+1.6
464,011	-				+2.1
464,012	+				+1.5
464,032	-				+0.1
464,103	+				+0.7
464,103	+				+1.1
464,105	-				-1.4
464,105	-				+0.7
464,105	-				+0.9
464,106	+				-2.2
464,106	+				-0.1
464,198	-		MMP_RS02475	0.27	-2.9
464,199	+		MMP_RS02475	0.28	+1.8
464,236	-		MMP_RS02475	0.42	+1.4
464,364	+				+1.6
464,455	-				+0.4
464,676	+		MMP_RS02480	0.38	-3.6
464,825	-		MMP_RS02480	0.67	+0.9
465,306	-		MMP_RS02490	0.49	-0.4
465,306	-		MMP_RS02490	0.49	+2.1
465,307	+		MMP_RS02490	0.49	+0.6