Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00800

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
146,097	-		MMP_RS00795	0.52	-0.2
146,135	+		MMP_RS00795	0.54	+0.2
146,242	-		MMP_RS00795	0.59	+0.2
146,516	+		MMP_RS00795	0.73	+1.2
146,731	-		MMP_RS00795	0.83	-2.9
146,732	+		MMP_RS00795	0.83	-3.4
146,735	-		MMP_RS00795	0.84	+0.1
146,736	+		MMP_RS00795	0.84	-0.7
146,795	-		MMP_RS00795	0.87	-1.3
146,905	-				-1.9
146,923	-				+1.0
146,952	-				-0.5
146,992	-				+0.7
147,035	+				-2.4
147,098	-				+0.3
147,176	-				+1.1
147,396	-		MMP_RS00800	0.27	-0.4
147,440	+		MMP_RS00800	0.31	-1.4
147,440	+		MMP_RS00800	0.31	+0.5
147,440	+		MMP_RS00800	0.31	-1.3
147,507	+		MMP_RS00800	0.37	-0.0
147,528	-		MMP_RS00800	0.39	+2.3
147,957	-		MMP_RS00800	0.77	-1.7
147,957	-		MMP_RS00800	0.77	-3.0
147,957	-		MMP_RS00800	0.77	-0.1
147,958	+		MMP_RS00800	0.77	-0.9
147,958	+		MMP_RS00800	0.77	+1.6
147,966	-		MMP_RS00800	0.77	-0.5
147,967	+		MMP_RS00800	0.78	+1.6
148,001	-		MMP_RS00800	0.81	+0.2
148,021	+		MMP_RS00800	0.82	-0.8
148,104	-		MMP_RS00800	0.90	-3.7
148,210	+				+0.1
148,218	+				+2.2
148,264	-				+1.0
148,265	+				+0.1
148,295	+				-0.7
148,441	-				-0.5
148,441	-				-1.1
148,442	+				-0.3
148,580	-				-1.2
148,580	-				-0.0
148,583	-				-1.8
148,693	+				+1.0
149,177	-				-1.0