Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00480

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
94,413	+		MMP_RS00475	0.40	-0.7
94,485	-		MMP_RS00475	0.46	-0.5
94,720	-		MMP_RS00475	0.68	-1.2
94,824	-		MMP_RS00475	0.78	+1.0
94,824	-		MMP_RS00475	0.78	+0.9
94,824	-		MMP_RS00475	0.78	+1.0
94,825	+		MMP_RS00475	0.78	+0.1
94,877	-		MMP_RS00475	0.83	-1.5
94,877	-		MMP_RS00475	0.83	-2.7
94,928	+		MMP_RS00475	0.87	-1.0
95,071	-				-1.8
95,071	-				-0.2
95,101	-				-1.4
95,179	-				+1.3
95,227	+				-1.2
95,272	+				+0.5
95,281	+				-2.3
95,315	-				-3.3
95,315	-				+0.1
95,315	-				-2.1
95,348	-				+0.9
95,373	-				+0.5
95,445	-				-0.2
95,452	+		MMP_RS00480	0.10	+0.8
95,466	-		MMP_RS00480	0.12	+0.8
95,475	-		MMP_RS00480	0.13	-0.8
95,475	-		MMP_RS00480	0.13	-1.7
95,513	-		MMP_RS00480	0.19	-1.8
95,513	-		MMP_RS00480	0.19	-0.7
95,514	+		MMP_RS00480	0.19	+1.0
95,563	-		MMP_RS00480	0.26	-2.3
95,804	-		MMP_RS00480	0.61	-2.6
95,856	+		MMP_RS00480	0.68	+0.1
95,970	+		MMP_RS00480	0.84	-0.3
96,002	-		MMP_RS00480	0.89	+2.4
96,009	-		MMP_RS00480	0.90	-1.9
96,009	-		MMP_RS00480	0.90	+0.8
96,055	-				-0.6
96,055	-				-3.7
96,055	-				+0.6
96,056	+				+0.4
96,058	-				-1.5
96,058	-				+1.8
96,058	-				-2.0
96,058	-				-2.1
96,060	-				+1.2
96,072	-				-2.4
96,126	+				+0.7
96,132	-				+0.5
96,133	+				+1.7
96,534	-				-1.3
96,940	-				-0.5