Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3700

Experiment: LB 20C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 20C
3,814,564	+		Ga0059261_3699	0.69	+0.3
3,814,564	+		Ga0059261_3699	0.69	+0.3
3,814,584	+		Ga0059261_3699	0.70	-0.3
3,814,584	+		Ga0059261_3699	0.70	+1.2
3,814,584	+		Ga0059261_3699	0.70	+0.5
3,814,639	+		Ga0059261_3699	0.71	+0.6
3,814,639	+		Ga0059261_3699	0.71	+0.3
3,814,639	+		Ga0059261_3699	0.71	-1.1
3,814,639	+		Ga0059261_3699	0.71	+0.4
3,814,639	+		Ga0059261_3699	0.71	+0.2
3,814,640	-		Ga0059261_3699	0.71	+0.8
3,814,640	-		Ga0059261_3699	0.71	+1.5
3,814,640	-		Ga0059261_3699	0.71	-1.4
3,814,640	-		Ga0059261_3699	0.71	+0.1
3,814,640	-		Ga0059261_3699	0.71	-0.8
3,814,640	-		Ga0059261_3699	0.71	+0.4
3,814,640	-		Ga0059261_3699	0.71	+0.0
3,814,640	-		Ga0059261_3699	0.71	-0.3
3,814,688	+		Ga0059261_3699	0.73	-0.6
3,814,716	+		Ga0059261_3699	0.74	+0.0
3,814,760	+		Ga0059261_3699	0.75	-1.4
3,814,760	+		Ga0059261_3699	0.75	+0.4
3,814,760	+		Ga0059261_3699	0.75	-1.1
3,814,761	-		Ga0059261_3699	0.75	-1.3
3,814,761	-				+1.1
3,814,761	-		Ga0059261_3699	0.75	-0.1
3,814,761	-		Ga0059261_3699	0.75	+0.4
3,814,821	+		Ga0059261_3699	0.77	-0.2
3,814,827	+		Ga0059261_3699	0.78	-0.8
3,814,856	-		Ga0059261_3699	0.79	-0.1
3,814,856	-		Ga0059261_3699	0.79	+1.3
3,814,875	-		Ga0059261_3699	0.79	-1.3
3,814,966	+		Ga0059261_3699	0.82	+0.5
3,814,966	+		Ga0059261_3699	0.82	-0.2
3,814,966	+		Ga0059261_3699	0.82	-0.3
3,814,966	+		Ga0059261_3699	0.82	-0.7
3,814,967	-		Ga0059261_3699	0.82	+0.1
3,814,986	+		Ga0059261_3699	0.83	-0.3
3,814,987	-		Ga0059261_3699	0.83	-0.0
3,814,987	-		Ga0059261_3699	0.83	+0.3
3,814,987	-		Ga0059261_3699	0.83	+0.1
3,814,987	-		Ga0059261_3699	0.83	+0.2
3,814,987	-		Ga0059261_3699	0.83	-2.4
3,814,987	-		Ga0059261_3699	0.83	-0.0
3,815,038	+		Ga0059261_3699	0.85	-0.3
3,815,038	+		Ga0059261_3699	0.85	-0.2
3,815,038	+		Ga0059261_3699	0.85	-0.9
3,815,088	+		Ga0059261_3699	0.86	-2.2
3,815,088	+		Ga0059261_3699	0.86	+0.8
3,815,088	+		Ga0059261_3699	0.86	+0.3
3,815,088	+		Ga0059261_3699	0.86	-0.1
3,815,088	+		Ga0059261_3699	0.86	-0.3
3,815,089	-		Ga0059261_3699	0.86	-0.2
3,815,089	-		Ga0059261_3699	0.86	-0.2
3,815,089	-		Ga0059261_3699	0.86	+1.2
3,815,089	-		Ga0059261_3699	0.86	+0.3
3,815,089	-		Ga0059261_3699	0.86	-0.5
3,815,089	-		Ga0059261_3699	0.86	+0.3
3,815,113	+		Ga0059261_3699	0.87	-1.9
3,815,113	+		Ga0059261_3699	0.87	+0.4
3,815,114	-		Ga0059261_3699	0.87	-0.5
3,815,114	-		Ga0059261_3699	0.87	-0.4
3,815,114	-		Ga0059261_3699	0.87	+0.1
3,815,114	-		Ga0059261_3699	0.87	-0.2
3,815,115	+		Ga0059261_3699	0.87	-0.3
3,815,115	+		Ga0059261_3699	0.87	+2.4
3,815,115	+		Ga0059261_3699	0.87	+0.1
3,815,115	+		Ga0059261_3699	0.87	-0.7
3,815,116	-		Ga0059261_3699	0.87	+0.5
3,815,116	-		Ga0059261_3699	0.87	-1.1
3,815,116	-		Ga0059261_3699	0.87	+0.1
3,815,152	+		Ga0059261_3699	0.89	+0.2
3,815,153	-		Ga0059261_3699	0.89	+0.2
3,815,153	-		Ga0059261_3699	0.89	+0.6
3,815,193	+		Ga0059261_3699	0.90	-1.3
3,815,194	-		Ga0059261_3699	0.90	+0.1
3,815,209	+				+0.2
3,815,210	-				-0.5
3,815,210	-				+0.1
3,815,210	-				-1.1
3,815,210	-				+0.2
3,815,210	-				-0.9
3,815,236	-				+0.5
3,815,265	+				+0.0
3,815,265	+				-0.7
3,815,265	+				-0.3
3,815,265	+				-0.7
3,815,265	+				-0.6
3,815,266	-				-0.4
3,815,266	-				+1.5
3,815,266	-				+0.1
3,815,266	-				-0.2
3,815,269	+				+0.2
3,815,269	+				+0.1
3,815,269	+				-1.0
3,815,270	-				+0.4
3,815,270	-				+0.7
3,815,270	-				+0.8
3,815,270	-				-0.8
3,815,270	-				-0.5
3,815,279	-				+1.1
3,815,279	-				+0.1
3,815,308	+				-0.8
3,815,308	+				-1.1
3,815,308	+				-1.9
3,815,308	+				-0.2
3,815,308	+				+0.0
3,815,308	+				-0.1
3,815,308	+				-0.8
3,815,308	+				+0.1
3,815,308	+				+0.1
3,815,309	-				+0.5
3,815,309	-				-0.5
3,815,309	-				-0.2
3,815,309	-				+1.2
3,815,309	-				-0.0
3,815,309	-				+1.8
3,815,309	-				-0.8
3,815,309	-				+0.5
3,815,309	-				-0.6
3,815,384	+				-0.5
3,815,384	+				-1.8
3,815,385	-				-1.5
3,815,385	-				-0.6
3,815,385	-				+2.1
3,815,385	-				+0.5
3,815,385	-				+0.8
3,815,440	+				+0.6
3,815,440	+				-1.0
3,815,440	+				+0.0
3,815,441	-				+0.2
3,815,441	-				-0.3
3,815,629	+				+0.5
3,815,629	+				+0.2
3,815,630	-				+0.8
3,815,630	-				-1.7
3,815,911	+		Ga0059261_3700	0.38	-1.9
3,815,974	+				-1.2
3,815,974	+		Ga0059261_3700	0.44	+0.8
3,815,974	+		Ga0059261_3700	0.44	+0.4
3,815,974	+		Ga0059261_3700	0.44	+0.8
3,815,975	-		Ga0059261_3700	0.44	+1.0
3,815,975	-		Ga0059261_3700	0.44	+0.7
3,815,975	-		Ga0059261_3700	0.44	-0.4
3,815,975	-		Ga0059261_3700	0.44	-1.3
3,816,562	+				+0.9
3,816,562	+				-0.5
3,816,562	+				-0.1
3,816,562	+				-0.1
3,816,562	+				+0.6
3,816,562	+				+1.3
3,816,562	+				-0.5
3,816,562	+				+0.8
3,816,563	-				+1.2
3,816,563	-				+0.7
3,816,563	-				-0.1
3,816,563	-				+0.2
3,816,675	+		Ga0059261_3701	0.12	-1.0
3,816,675	+		Ga0059261_3701	0.12	+0.2
3,816,675	+		Ga0059261_3701	0.12	-1.1
3,816,676	-		Ga0059261_3701	0.12	-0.2
3,816,676	-		Ga0059261_3701	0.12	-1.5
3,816,678	+		Ga0059261_3701	0.12	+0.2
3,816,678	+		Ga0059261_3701	0.12	-0.3
3,816,678	+		Ga0059261_3701	0.12	-0.4
3,816,678	+		Ga0059261_3701	0.12	+1.5
3,816,679	-		Ga0059261_3701	0.13	-0.2
3,816,679	-				-0.8
3,816,679	-		Ga0059261_3701	0.13	-0.3
3,816,679	-		Ga0059261_3701	0.13	+0.6
3,816,679	-		Ga0059261_3701	0.13	-1.5
3,816,789	+		Ga0059261_3701	0.28	+1.2
3,816,789	+		Ga0059261_3701	0.28	+0.5
3,816,789	+		Ga0059261_3701	0.28	+0.7
3,816,789	+		Ga0059261_3701	0.28	-0.1
3,816,789	+		Ga0059261_3701	0.28	+0.2
3,816,789	+		Ga0059261_3701	0.28	-0.8
3,816,789	+		Ga0059261_3701	0.28	-1.3
3,816,789	+		Ga0059261_3701	0.28	+1.0
3,816,789	+		Ga0059261_3701	0.28	+1.2
3,816,789	+		Ga0059261_3701	0.28	+1.2
3,816,789	+		Ga0059261_3701	0.28	+0.2
3,816,789	+		Ga0059261_3701	0.28	+0.2
3,816,789	+		Ga0059261_3701	0.28	-0.6
3,816,789	+		Ga0059261_3701	0.28	+1.1
3,816,790	-		Ga0059261_3701	0.28	+0.1
3,816,790	-		Ga0059261_3701	0.28	-0.5
3,816,790	-		Ga0059261_3701	0.28	+0.8
3,816,790	-		Ga0059261_3701	0.28	+0.4
3,816,790	-		Ga0059261_3701	0.28	-0.6
3,816,790	-		Ga0059261_3701	0.28	+0.1
3,816,790	-		Ga0059261_3701	0.28	+0.2
3,816,790	-		Ga0059261_3701	0.28	-0.5
3,816,790	-		Ga0059261_3701	0.28	+1.8
3,816,790	-		Ga0059261_3701	0.28	-0.8
3,816,790	-		Ga0059261_3701	0.28	-0.2
3,816,790	-		Ga0059261_3701	0.28	+0.2
3,816,790	-		Ga0059261_3701	0.28	-0.5
3,816,790	-		Ga0059261_3701	0.28	-1.1
3,816,900	+		Ga0059261_3701	0.44	-2.0
3,816,900	+		Ga0059261_3701	0.44	-0.7
3,816,900	+		Ga0059261_3701	0.44	+0.8
3,816,901	-		Ga0059261_3701	0.44	-0.8
3,816,901	-		Ga0059261_3701	0.44	+0.4
3,816,901	-		Ga0059261_3701	0.44	+0.1
3,817,144	-		Ga0059261_3701	0.79	-0.3
3,817,149	+		Ga0059261_3701	0.80	-0.7
3,817,149	+		Ga0059261_3701	0.80	+0.1
3,817,149	+		Ga0059261_3701	0.80	-0.9
3,817,149	+		Ga0059261_3701	0.80	+0.8
3,817,149	+		Ga0059261_3701	0.80	-1.3
3,817,150	-		Ga0059261_3701	0.80	+0.1
3,817,150	-		Ga0059261_3701	0.80	+0.4
3,817,150	-		Ga0059261_3701	0.80	+0.6
3,817,150	-		Ga0059261_3701	0.80	+0.8
3,817,392	+				+0.2
3,817,392	+				+0.2
3,817,392	+				+0.2
3,817,392	+				+0.1
3,817,392	+				+0.4
3,817,392	+				-0.9
3,817,392	+				-1.2
3,817,393	-				-0.1
3,817,393	-				+0.7
3,817,395	+				-0.8
3,817,395	+				-0.2
3,817,395	+				-0.1
3,817,395	+				-0.1
3,817,395	+				-0.2
3,817,396	-				+0.1
3,817,396	-				+0.4
3,817,396	-				-0.1
3,817,396	-				-0.2
3,817,396	-				-0.3
3,817,404	+				+1.2
3,817,404	+				-0.1
3,817,404	+				-0.9
3,817,405	-				+0.3
3,817,405	-				-0.0
3,817,412	+				+0.7
3,817,412	+				+1.6
3,817,412	+				-0.7
3,817,412	+				+1.4
3,817,413	-				+0.3
3,817,413	-				-0.3
3,817,413	-				+1.1
3,817,413	-				-0.2
3,817,472	+		Ga0059261_3702	0.17	-0.8
3,817,472	+		Ga0059261_3702	0.17	-0.6