Experiment: LB_Aerobic_120MIN_ZN10B
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CSW01_14175 and CSW01_14180 are separated by 95 nucleotides CSW01_14180 and CSW01_14185 are separated by 431 nucleotides
CSW01_14175: CSW01_14175 - Anion transporter, at 30,483 to 31,871
_14175
CSW01_14180: CSW01_14180 - hypothetical protein, at 31,967 to 32,602
_14180
CSW01_14185: CSW01_14185 - chitinase, at 33,034 to 35,583
_14185
Position (kb) 31
32
33 Strain fitness (log2 ratio) -2
-1
0
1
2 at 31.051 kb on + strand, within CSW01_14175 at 31.260 kb on + strand, within CSW01_14175 at 31.260 kb on + strand, within CSW01_14175 at 31.261 kb on - strand, within CSW01_14175 at 31.327 kb on + strand, within CSW01_14175 at 31.332 kb on + strand, within CSW01_14175 at 31.340 kb on - strand, within CSW01_14175 at 31.340 kb on - strand, within CSW01_14175 at 31.462 kb on + strand, within CSW01_14175 at 31.582 kb on - strand, within CSW01_14175 at 31.590 kb on - strand, within CSW01_14175 at 31.688 kb on - strand, within CSW01_14175 at 31.698 kb on - strand, within CSW01_14175 at 31.723 kb on + strand, within CSW01_14175 at 31.731 kb on - strand, within CSW01_14175 at 31.746 kb on - strand at 31.809 kb on - strand at 31.941 kb on - strand at 32.088 kb on + strand, within CSW01_14180 at 32.088 kb on + strand, within CSW01_14180 at 32.112 kb on - strand, within CSW01_14180 at 32.114 kb on + strand, within CSW01_14180 at 32.122 kb on - strand, within CSW01_14180 at 32.244 kb on + strand, within CSW01_14180 at 32.476 kb on + strand, within CSW01_14180 at 32.476 kb on + strand, within CSW01_14180 at 32.484 kb on - strand, within CSW01_14180 at 32.544 kb on - strand at 32.588 kb on - strand at 32.588 kb on - strand at 32.596 kb on - strand at 32.634 kb on + strand at 32.677 kb on + strand at 32.677 kb on + strand at 32.686 kb on - strand at 33.068 kb on - strand at 33.189 kb on - strand at 33.196 kb on + strand at 33.238 kb on - strand at 33.284 kb on + strand at 33.292 kb on - strand, within CSW01_14185 at 33.292 kb on - strand, within CSW01_14185 at 33.342 kb on + strand, within CSW01_14185 at 33.342 kb on + strand, within CSW01_14185 at 33.348 kb on + strand, within CSW01_14185 at 33.442 kb on - strand, within CSW01_14185 at 33.447 kb on + strand, within CSW01_14185 at 33.455 kb on - strand, within CSW01_14185 at 33.486 kb on + strand, within CSW01_14185 at 33.486 kb on + strand, within CSW01_14185 at 33.488 kb on - strand, within CSW01_14185 at 33.494 kb on - strand, within CSW01_14185 at 33.494 kb on - strand, within CSW01_14185 at 33.494 kb on - strand, within CSW01_14185 at 33.494 kb on - strand, within CSW01_14185 at 33.494 kb on - strand, within CSW01_14185 at 33.494 kb on - strand, within CSW01_14185 at 33.494 kb on - strand, within CSW01_14185 at 33.532 kb on + strand, within CSW01_14185 at 33.572 kb on + strand, within CSW01_14185 at 33.577 kb on + strand, within CSW01_14185 at 33.577 kb on + strand, within CSW01_14185
Per-strain Table
Position Strand Gene LocusTag Fraction LB_Aerobic_120MIN_ZN10B remove 31,051 + CSW01_14175 0.41 -1.0 31,260 + CSW01_14175 0.56 -0.4 31,260 + CSW01_14175 0.56 -1.6 31,261 - CSW01_14175 0.56 +0.1 31,327 + CSW01_14175 0.61 -0.4 31,332 + CSW01_14175 0.61 -0.2 31,340 - CSW01_14175 0.62 -0.5 31,340 - CSW01_14175 0.62 -1.5 31,462 + CSW01_14175 0.70 +0.4 31,582 - CSW01_14175 0.79 +0.1 31,590 - CSW01_14175 0.80 -0.9 31,688 - CSW01_14175 0.87 +0.1 31,698 - CSW01_14175 0.87 +0.7 31,723 + CSW01_14175 0.89 -0.4 31,731 - CSW01_14175 0.90 -0.2 31,746 - -0.6 31,809 - -0.3 31,941 - -0.2 32,088 + CSW01_14180 0.19 -0.0 32,088 + CSW01_14180 0.19 -0.1 32,112 - CSW01_14180 0.23 -2.4 32,114 + CSW01_14180 0.23 -1.7 32,122 - CSW01_14180 0.24 +0.9 32,244 + CSW01_14180 0.44 -0.0 32,476 + CSW01_14180 0.80 +0.2 32,476 + CSW01_14180 0.80 +1.1 32,484 - CSW01_14180 0.81 -0.7 32,544 - -1.1 32,588 - +0.1 32,588 - -0.4 32,596 - -1.6 32,634 + -0.5 32,677 + +2.3 32,677 + +1.1 32,686 - +0.1 33,068 - -0.5 33,189 - -0.3 33,196 + +0.1 33,238 - +0.6 33,284 + -0.3 33,292 - CSW01_14185 0.10 +0.1 33,292 - CSW01_14185 0.10 -0.0 33,342 + CSW01_14185 0.12 +0.1 33,342 + CSW01_14185 0.12 +0.0 33,348 + CSW01_14185 0.12 +1.3 33,442 - CSW01_14185 0.16 -0.7 33,447 + CSW01_14185 0.16 -1.0 33,455 - CSW01_14185 0.17 +0.1 33,486 + CSW01_14185 0.18 +0.4 33,486 + CSW01_14185 0.18 -0.2 33,488 - CSW01_14185 0.18 -0.5 33,494 - CSW01_14185 0.18 -0.1 33,494 - CSW01_14185 0.18 -0.2 33,494 - CSW01_14185 0.18 -0.8 33,494 - CSW01_14185 0.18 +1.0 33,494 - CSW01_14185 0.18 +0.2 33,494 - CSW01_14185 0.18 -0.2 33,494 - CSW01_14185 0.18 -0.4 33,532 + CSW01_14185 0.20 -0.8 33,572 + CSW01_14185 0.21 -1.9 33,577 + CSW01_14185 0.21 -0.2 33,577 + CSW01_14185 0.21 +0.6
Or see this region's nucleotide sequence