Experiment: LB_Aerobic_120MIN_ZN10B
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CSW01_14165 and CSW01_14170 are separated by 115 nucleotides CSW01_14170 and CSW01_14175 are separated by 277 nucleotides
CSW01_14165: CSW01_14165 - fucose 4-O-acetylase, at 28,057 to 29,097
_14165
CSW01_14170: CSW01_14170 - AEC family transporter, at 29,213 to 30,205
_14170
CSW01_14175: CSW01_14175 - Anion transporter, at 30,483 to 31,871
_14175
Position (kb) 29
30
31 Strain fitness (log2 ratio) -2
-1
0
1
2 at 28.346 kb on + strand, within CSW01_14165 at 28.348 kb on + strand, within CSW01_14165 at 28.354 kb on - strand, within CSW01_14165 at 28.368 kb on + strand, within CSW01_14165 at 28.368 kb on + strand, within CSW01_14165 at 28.375 kb on + strand, within CSW01_14165 at 28.375 kb on + strand, within CSW01_14165 at 28.375 kb on + strand, within CSW01_14165 at 28.375 kb on + strand, within CSW01_14165 at 28.393 kb on + strand, within CSW01_14165 at 28.423 kb on - strand, within CSW01_14165 at 28.455 kb on - strand, within CSW01_14165 at 28.536 kb on - strand, within CSW01_14165 at 28.552 kb on + strand, within CSW01_14165 at 28.575 kb on + strand, within CSW01_14165 at 28.575 kb on + strand, within CSW01_14165 at 28.575 kb on + strand, within CSW01_14165 at 28.576 kb on - strand, within CSW01_14165 at 28.583 kb on - strand, within CSW01_14165 at 28.583 kb on - strand, within CSW01_14165 at 28.583 kb on - strand, within CSW01_14165 at 28.583 kb on - strand, within CSW01_14165 at 28.583 kb on - strand, within CSW01_14165 at 28.890 kb on + strand, within CSW01_14165 at 28.956 kb on + strand, within CSW01_14165 at 29.049 kb on + strand at 29.057 kb on - strand at 29.081 kb on - strand at 29.090 kb on - strand at 29.196 kb on + strand at 29.211 kb on + strand at 29.219 kb on - strand at 29.258 kb on + strand at 29.266 kb on - strand at 29.335 kb on + strand, within CSW01_14170 at 29.359 kb on + strand, within CSW01_14170 at 29.432 kb on + strand, within CSW01_14170 at 29.432 kb on + strand, within CSW01_14170 at 29.440 kb on - strand, within CSW01_14170 at 29.440 kb on - strand, within CSW01_14170 at 29.531 kb on - strand, within CSW01_14170 at 29.546 kb on + strand, within CSW01_14170 at 29.601 kb on - strand, within CSW01_14170 at 29.691 kb on + strand, within CSW01_14170 at 29.776 kb on + strand, within CSW01_14170 at 29.816 kb on - strand, within CSW01_14170 at 29.870 kb on + strand, within CSW01_14170 at 29.906 kb on - strand, within CSW01_14170 at 29.945 kb on + strand, within CSW01_14170 at 30.013 kb on + strand, within CSW01_14170 at 30.073 kb on + strand, within CSW01_14170 at 30.184 kb on - strand at 30.189 kb on - strand at 30.340 kb on - strand at 30.462 kb on - strand at 30.462 kb on - strand at 30.587 kb on + strand at 30.603 kb on + strand at 30.653 kb on + strand, within CSW01_14175 at 30.736 kb on + strand, within CSW01_14175 at 30.800 kb on + strand, within CSW01_14175 at 30.800 kb on + strand, within CSW01_14175 at 30.817 kb on + strand, within CSW01_14175 at 30.827 kb on + strand, within CSW01_14175 at 30.827 kb on + strand, within CSW01_14175 at 30.885 kb on + strand, within CSW01_14175 at 31.051 kb on + strand, within CSW01_14175
Per-strain Table
Position Strand Gene LocusTag Fraction LB_Aerobic_120MIN_ZN10B remove 28,346 + CSW01_14165 0.28 -0.7 28,348 + CSW01_14165 0.28 +0.9 28,354 - CSW01_14165 0.29 -0.1 28,368 + CSW01_14165 0.30 +0.2 28,368 + CSW01_14165 0.30 -2.3 28,375 + CSW01_14165 0.31 -0.1 28,375 + CSW01_14165 0.31 -0.7 28,375 + CSW01_14165 0.31 -0.0 28,375 + CSW01_14165 0.31 +0.0 28,393 + CSW01_14165 0.32 -0.7 28,423 - CSW01_14165 0.35 +0.6 28,455 - CSW01_14165 0.38 -0.3 28,536 - CSW01_14165 0.46 -0.3 28,552 + CSW01_14165 0.48 -2.1 28,575 + CSW01_14165 0.50 -0.9 28,575 + CSW01_14165 0.50 -0.0 28,575 + CSW01_14165 0.50 -0.5 28,576 - CSW01_14165 0.50 +0.2 28,583 - CSW01_14165 0.51 -2.2 28,583 - CSW01_14165 0.51 -1.3 28,583 - CSW01_14165 0.51 -0.5 28,583 - CSW01_14165 0.51 -0.7 28,583 - CSW01_14165 0.51 -0.2 28,890 + CSW01_14165 0.80 +0.0 28,956 + CSW01_14165 0.86 -1.3 29,049 + -0.2 29,057 - +0.0 29,081 - -0.3 29,090 - -0.6 29,196 + +1.9 29,211 + +0.2 29,219 - +0.0 29,258 + -0.8 29,266 - -0.9 29,335 + CSW01_14170 0.12 -0.2 29,359 + CSW01_14170 0.15 +1.5 29,432 + CSW01_14170 0.22 +0.0 29,432 + CSW01_14170 0.22 -0.6 29,440 - CSW01_14170 0.23 -0.8 29,440 - CSW01_14170 0.23 +0.5 29,531 - CSW01_14170 0.32 +0.8 29,546 + CSW01_14170 0.34 +0.4 29,601 - CSW01_14170 0.39 -0.3 29,691 + CSW01_14170 0.48 -0.4 29,776 + CSW01_14170 0.57 -1.2 29,816 - CSW01_14170 0.61 -0.2 29,870 + CSW01_14170 0.66 +0.2 29,906 - CSW01_14170 0.70 +0.9 29,945 + CSW01_14170 0.74 +0.6 30,013 + CSW01_14170 0.81 +0.4 30,073 + CSW01_14170 0.87 -0.3 30,184 - -0.3 30,189 - -0.0 30,340 - +0.1 30,462 - +0.2 30,462 - -0.9 30,587 + -0.2 30,603 + -1.1 30,653 + CSW01_14175 0.12 -0.7 30,736 + CSW01_14175 0.18 +0.1 30,800 + CSW01_14175 0.23 +1.0 30,800 + CSW01_14175 0.23 -0.2 30,817 + CSW01_14175 0.24 +0.0 30,827 + CSW01_14175 0.25 -0.8 30,827 + CSW01_14175 0.25 +0.1 30,885 + CSW01_14175 0.29 +0.5 31,051 + CSW01_14175 0.41 -1.0
Or see this region's nucleotide sequence