Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_17380

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
3,915,761	+		AO356_17375	0.22	+0.5
3,915,775	-		AO356_17375	0.24	-0.0
3,915,852	+		AO356_17375	0.36	+1.4
3,915,852	+		AO356_17375	0.36	+1.1
3,915,852	+		AO356_17375	0.36	+0.2
3,915,852	+		AO356_17375	0.36	-0.0
3,915,852	+		AO356_17375	0.36	-0.4
3,915,852	+		AO356_17375	0.36	+0.2
3,915,852	+		AO356_17375	0.36	+0.4
3,915,853	-		AO356_17375	0.36	-1.6
3,915,853	-		AO356_17375	0.36	-1.7
3,915,853	-		AO356_17375	0.36	-0.2
3,915,853	-		AO356_17375	0.36	-1.2
3,915,853	-		AO356_17375	0.36	-0.6
3,915,853	-		AO356_17375	0.36	+0.6
3,915,853	-		AO356_17375	0.36	+0.8
3,915,853	-		AO356_17375	0.36	-1.5
3,915,853	-		AO356_17375	0.36	-0.9
3,915,853	-		AO356_17375	0.36	-0.6
3,915,853	-		AO356_17375	0.36	+0.5
3,915,853	-		AO356_17375	0.36	-1.6
3,915,853	-		AO356_17375	0.36	-1.9
3,915,853	-		AO356_17375	0.36	-0.1
3,915,853	-		AO356_17375	0.36	-0.8
3,915,853	-		AO356_17375	0.36	+0.8
3,915,857	-		AO356_17375	0.37	-1.6
3,915,857	-		AO356_17375	0.37	+0.6
3,915,857	-		AO356_17375	0.37	-0.8
3,915,857	-		AO356_17375	0.37	-0.9
3,915,857	-		AO356_17375	0.37	-1.2
3,915,857	-		AO356_17375	0.37	-1.2
3,915,857	-		AO356_17375	0.37	-1.7
3,915,857	-		AO356_17375	0.37	-1.5
3,915,912	+		AO356_17375	0.45	-0.3
3,915,913	-		AO356_17375	0.45	-0.6
3,915,913	-		AO356_17375	0.45	+0.5
3,915,965	+		AO356_17375	0.53	-0.3
3,916,071	+		AO356_17375	0.69	-0.2
3,916,072	-		AO356_17375	0.69	+0.3
3,916,090	-		AO356_17375	0.72	+0.4
3,916,090	-		AO356_17375	0.72	-1.6
3,916,191	+		AO356_17375	0.87	+1.1
3,916,222	+				+0.7
3,916,223	-				-0.4
3,916,223	-				-0.3
3,916,319	+				+0.6
3,916,320	-				-0.8
3,916,345	-				-1.2
3,916,345	-				-1.2
3,916,348	+				+0.8
3,916,348	+				-1.1
3,916,348	+				+0.6
3,916,349	-				-1.0
3,916,349	-				-2.7
3,916,349	-				-1.7
3,916,388	+				+2.2
3,916,389	-				-0.8
3,916,451	+				-0.4
3,916,452	-				-2.4
3,916,452	-				-0.7
3,916,452	-				+0.4
3,916,452	-				-1.2
3,916,469	+				+2.5
3,916,469	+				+0.6
3,916,469	+				+1.2
3,916,469	+				+1.6
3,916,469	+				+0.8
3,916,469	+				+1.2
3,916,469	+				+1.8
3,916,470	-				-1.2
3,916,476	+				+0.7
3,916,477	-				-1.6
3,916,477	-				+0.2
3,916,477	-				-2.0
3,916,477	-				-0.4
3,916,495	-				-0.9
3,916,558	-				-1.6
3,916,558	-				-1.0
3,916,603	+				+1.5
3,916,618	+				+1.4
3,916,619	-				-0.8
3,916,619	-				-0.5
3,916,619	-				-0.4
3,916,619	-				-2.4
3,916,619	-				+0.8
3,916,619	-				-1.6
3,916,621	+				+1.3
3,916,622	-				-0.9
3,916,622	-				-0.7
3,916,622	-				-0.4
3,916,622	-				-1.6
3,916,622	-				-1.5
3,916,629	+				+1.2
3,916,630	-				-1.1
3,916,630	-				-1.6
3,916,630	-				-1.5
3,916,753	+				-1.4
3,916,754	-				+0.6
3,916,793	-				-0.4
3,916,793	-				-1.1
3,916,793	-				+0.4
3,916,793	-				-1.6
3,917,121	+		AO356_17380	0.36	-0.1
3,917,121	+		AO356_17380	0.36	-0.8
3,917,121	+		AO356_17380	0.36	-0.5
3,917,121	+		AO356_17380	0.36	+0.0
3,917,121	+		AO356_17380	0.36	-0.6
3,917,122	-		AO356_17380	0.36	-1.2
3,917,122	-		AO356_17380	0.36	-2.1
3,917,122	-		AO356_17380	0.36	-1.4
3,917,122	-		AO356_17380	0.36	-0.3
3,917,122	-		AO356_17380	0.36	-1.1
3,917,122	-		AO356_17380	0.36	-0.4
3,917,122	-		AO356_17380	0.36	-0.1
3,917,124	+		AO356_17380	0.37	-0.6
3,917,124	+		AO356_17380	0.37	-1.8
3,917,124	+		AO356_17380	0.37	-0.4
3,917,124	+		AO356_17380	0.37	-0.3
3,917,124	+		AO356_17380	0.37	-0.4
3,917,124	+		AO356_17380	0.37	-0.8
3,917,124	+		AO356_17380	0.37	-1.2
3,917,124	+		AO356_17380	0.37	-0.4
3,917,124	+		AO356_17380	0.37	-2.8
3,917,125	-		AO356_17380	0.37	-1.4
3,917,125	-		AO356_17380	0.37	-0.8
3,917,125	-		AO356_17380	0.37	-0.2
3,917,125	-		AO356_17380	0.37	-0.8
3,917,125	-		AO356_17380	0.37	-0.9
3,917,125	-		AO356_17380	0.37	-0.8
3,917,125	-		AO356_17380	0.37	-0.3
3,917,125	-		AO356_17380	0.37	-1.9
3,917,125	-		AO356_17380	0.37	-1.1
3,917,125	-		AO356_17380	0.37	-1.4
3,917,125	-		AO356_17380	0.37	-3.5
3,917,125	-		AO356_17380	0.37	-2.6
3,917,242	-		AO356_17380	0.48	-1.5
3,917,265	+		AO356_17380	0.50	-3.3
3,917,265	+		AO356_17380	0.50	-1.9
3,917,265	+		AO356_17380	0.50	-1.1
3,917,266	-		AO356_17380	0.50	-1.0
3,917,394	+		AO356_17380	0.63	-0.8
3,917,394	+		AO356_17380	0.63	-1.8
3,917,395	-		AO356_17380	0.63	+0.4
3,917,395	-		AO356_17380	0.63	-0.8
3,917,579	+		AO356_17380	0.81	-1.9
3,917,579	+		AO356_17380	0.81	-0.1
3,917,580	-		AO356_17380	0.81	-2.4
3,917,580	-		AO356_17380	0.81	-0.6
3,917,602	-		AO356_17380	0.83	-1.3
3,917,664	+		AO356_17380	0.89	+0.2
3,917,664	+		AO356_17380	0.89	-1.1
3,917,664	+		AO356_17380	0.89	-0.3
3,917,665	-		AO356_17380	0.89	-0.9
3,917,665	-		AO356_17380	0.89	-2.1
3,917,665	-		AO356_17380	0.89	-3.0
3,917,665	-		AO356_17380	0.89	-0.6
3,917,758	-				-1.1
3,917,758	-				-1.1
3,917,784	+				+0.0
3,917,784	+				+1.0
3,917,785	-				-1.2
3,917,866	+				-0.3
3,917,866	+				-1.6
3,917,867	-				-2.1
3,917,867	-				-1.7
3,917,867	-				-1.9
3,917,867	-				-1.2
3,917,867	-				-0.3
3,917,911	-				-2.2
3,918,063	-		AO356_17385	0.19	-0.8
3,918,080	+		AO356_17385	0.20	-1.9
3,918,080	+		AO356_17385	0.20	-0.1
3,918,080	+		AO356_17385	0.20	-1.2
3,918,080	+		AO356_17385	0.20	-2.6
3,918,080	+		AO356_17385	0.20	-2.2
3,918,080	+		AO356_17385	0.20	+0.4
3,918,080	+		AO356_17385	0.20	-1.2
3,918,080	+		AO356_17385	0.20	-0.6
3,918,080	+		AO356_17385	0.20	-2.4
3,918,080	+		AO356_17385	0.20	-2.8
3,918,081	-		AO356_17385	0.20	-1.8
3,918,081	-		AO356_17385	0.20	-2.2
3,918,081	-		AO356_17385	0.20	-1.1
3,918,081	-		AO356_17385	0.20	-1.6
3,918,081	-		AO356_17385	0.20	-2.1
3,918,081	-		AO356_17385	0.20	-2.2
3,918,081	-		AO356_17385	0.20	-2.6
3,918,221	+		AO356_17385	0.32	-1.3
3,918,221	+		AO356_17385	0.32	-1.4
3,918,221	+		AO356_17385	0.32	-0.7
3,918,221	+		AO356_17385	0.32	-1.9
3,918,222	-		AO356_17385	0.32	-1.6
3,918,222	-		AO356_17385	0.32	-2.5
3,918,222	-		AO356_17385	0.32	-1.4
3,918,222	-		AO356_17385	0.32	-1.4
3,918,651	+		AO356_17385	0.68	-1.3
3,918,651	+		AO356_17385	0.68	-1.7
3,918,651	+		AO356_17385	0.68	-1.1
3,918,651	+		AO356_17385	0.68	-0.5
3,918,651	+		AO356_17385	0.68	-1.4
3,918,651	+		AO356_17385	0.68	-0.8
3,918,651	+		AO356_17385	0.68	-2.2
3,918,651	+		AO356_17385	0.68	-1.4
3,918,651	+		AO356_17385	0.68	-2.8
3,918,651	+		AO356_17385	0.68	-2.6
3,918,651	+		AO356_17385	0.68	-1.9
3,918,651	+		AO356_17385	0.68	-0.2
3,918,651	+		AO356_17385	0.68	-1.7
3,918,651	+		AO356_17385	0.68	+0.3
3,918,651	+		AO356_17385	0.68	-1.3
3,918,651	+		AO356_17385	0.68	-0.8
3,918,652	-		AO356_17385	0.68	-2.2
3,918,652	-		AO356_17385	0.68	-2.2
3,918,652	-		AO356_17385	0.68	+0.2
3,918,652	-		AO356_17385	0.68	-1.1
3,918,652	-		AO356_17385	0.68	-1.9
3,918,652	-		AO356_17385	0.68	-0.8
3,918,653	+		AO356_17385	0.69	-0.5
3,918,653	+		AO356_17385	0.69	-0.5
3,918,653	+		AO356_17385	0.69	+0.2
3,918,653	+		AO356_17385	0.69	-0.6
3,918,654	-		AO356_17385	0.69	+0.9
3,918,654	-		AO356_17385	0.69	+0.8
3,918,654	-		AO356_17385	0.69	-1.6
3,918,654	-		AO356_17385	0.69	-2.2
3,918,654	-		AO356_17385	0.69	-0.9
3,918,654	-		AO356_17385	0.69	-1.1
3,918,654	-		AO356_17385	0.69	-1.7
3,918,654	-		AO356_17385	0.69	-0.7
3,918,654	-		AO356_17385	0.69	-1.7
3,918,654	-		AO356_17385	0.69	-2.8
3,918,655	+		AO356_17385	0.69	-0.1
3,918,655	+		AO356_17385	0.69	-2.3
3,918,656	-		AO356_17385	0.69	-1.7
3,918,656	-		AO356_17385	0.69	-1.6
3,918,656	-		AO356_17385	0.69	-2.2