Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16410

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
3,706,987	+		AO356_16405	0.59	+2.2
3,707,164	-		AO356_16405	0.75	+0.2
3,707,326	-				+0.3
3,707,413	+				+0.5
3,707,413	+				+0.2
3,707,414	-				+0.5
3,707,495	-				-0.3
3,707,505	+				+1.1
3,707,516	-				-0.5
3,707,524	+				+0.1
3,707,556	+				+1.0
3,707,601	-				+0.6
3,707,622	+				+0.4
3,707,657	+				-0.8
3,707,658	-				+1.2
3,707,666	+				-0.2
3,707,667	-				-0.2
3,707,681	+				+0.3
3,707,682	-				+1.0
3,707,682	-				-0.0
3,707,682	-				+0.5
3,707,706	+				-1.2
3,707,706	+				+1.6
3,707,707	-				-0.2
3,707,712	+				+0.3
3,707,713	-				+0.3
3,707,713	-				+0.1
3,707,713	-				+1.2
3,707,731	+				+1.1
3,707,732	-				+0.4
3,707,773	-				+0.1
3,707,773	-				+0.6
3,707,774	+				+1.7
3,707,870	-				+0.9
3,707,870	-				-1.2
3,707,897	+				-1.2
3,707,901	+				+0.5
3,707,902	-				-0.1
3,707,921	+				+1.0
3,707,922	-				+0.2
3,708,004	-				-0.9
3,708,036	+				+0.2
3,708,036	+				+0.3
3,708,036	+				+0.3
3,708,036	+				+0.8
3,708,036	+				+0.6
3,708,036	+				-0.8
3,708,037	-				+0.6
3,708,037	-				-0.2
3,708,037	-				+0.6
3,708,037	-				-0.1
3,708,037	-				-0.3
3,708,235	+		AO356_16410	0.14	+0.8
3,708,236	-		AO356_16410	0.14	+1.1
3,708,236	-		AO356_16410	0.14	-1.3
3,708,236	-		AO356_16410	0.14	-0.8
3,708,279	+		AO356_16410	0.16	+1.3
3,708,279	+		AO356_16410	0.16	+0.2
3,708,279	+		AO356_16410	0.16	+0.3
3,708,279	+		AO356_16410	0.16	+1.4
3,708,279	+		AO356_16410	0.16	-0.2
3,708,279	+		AO356_16410	0.16	-0.4
3,708,280	-		AO356_16410	0.16	+0.2
3,708,280	-		AO356_16410	0.16	+0.3
3,708,280	-		AO356_16410	0.16	+0.6
3,708,280	-		AO356_16410	0.16	-0.1
3,708,280	-		AO356_16410	0.16	-0.2
3,708,280	-		AO356_16410	0.16	+0.9
3,708,280	-		AO356_16410	0.16	+0.1
3,708,280	-		AO356_16410	0.16	+0.3
3,708,280	-		AO356_16410	0.16	+0.0
3,708,280	-		AO356_16410	0.16	+0.6
3,708,347	+		AO356_16410	0.19	+1.3
3,708,347	+		AO356_16410	0.19	+0.6
3,708,347	+		AO356_16410	0.19	-0.2
3,708,348	-		AO356_16410	0.19	+0.7
3,708,426	+		AO356_16410	0.23	-0.2
3,708,427	-		AO356_16410	0.23	+1.2
3,708,427	-		AO356_16410	0.23	-0.4
3,708,427	-		AO356_16410	0.23	+0.2
3,708,427	-		AO356_16410	0.23	-0.5
3,708,474	+		AO356_16410	0.25	+0.1
3,708,525	+		AO356_16410	0.28	+1.0
3,708,525	+		AO356_16410	0.28	+1.0
3,708,525	+		AO356_16410	0.28	+0.3
3,708,526	-		AO356_16410	0.28	+1.2
3,708,526	-		AO356_16410	0.28	-0.7
3,708,526	-		AO356_16410	0.28	+0.8
3,708,526	-		AO356_16410	0.28	-1.7
3,708,526	-		AO356_16410	0.28	+0.5
3,708,526	-		AO356_16410	0.28	-0.4
3,708,526	-		AO356_16410	0.28	+0.3
3,708,594	+		AO356_16410	0.31	+0.2
3,708,594	+		AO356_16410	0.31	+0.8
3,708,594	+		AO356_16410	0.31	+0.0
3,708,595	-		AO356_16410	0.31	+0.3
3,708,595	-		AO356_16410	0.31	+0.8
3,708,629	+		AO356_16410	0.32	+1.0
3,708,666	+		AO356_16410	0.34	-0.1
3,708,667	-		AO356_16410	0.34	+0.8
3,708,667	-		AO356_16410	0.34	+0.4
3,708,699	-		AO356_16410	0.36	+1.5
3,708,846	-		AO356_16410	0.42	+1.0
3,709,220	+		AO356_16410	0.59	+0.2
3,709,220	+		AO356_16410	0.59	+0.8
3,709,221	-		AO356_16410	0.59	+1.8
3,709,221	-		AO356_16410	0.59	+0.1
3,709,272	-		AO356_16410	0.62	+0.3
3,709,272	-		AO356_16410	0.62	+0.2
3,709,545	-		AO356_16410	0.74	-0.7
3,709,899	+				-0.2
3,709,899	+				-0.1
3,709,899	+				+0.8
3,709,900	-				-0.3
3,710,086	+				-1.5
3,710,087	-				+0.0
3,710,160	-				+0.8
3,710,219	+				-0.2
3,710,219	+				+1.0
3,710,220	-				+0.3
3,710,220	-				-1.7
3,710,241	-				-0.8
3,710,241	-				+0.4
3,710,241	-				+0.9
3,710,241	-				-0.9
3,710,241	-				-1.0
3,710,283	+				-0.5
3,710,283	+				-0.4
3,710,284	-				-0.1
3,710,284	-				-2.4
3,710,284	-				-0.4
3,710,316	+				+1.0
3,710,317	-				+0.5
3,710,317	-				-0.4
3,710,331	+				+0.5
3,710,348	+				+1.1
3,710,348	+				+0.7
3,710,349	-				+0.6
3,710,349	-				+0.7
3,710,384	+		AO356_16415	0.10	+0.3
3,710,384	+		AO356_16415	0.10	+0.5
3,710,384	+		AO356_16415	0.10	+0.3
3,710,384	+		AO356_16415	0.10	-0.6
3,710,385	-		AO356_16415	0.10	+1.0
3,710,610	+		AO356_16415	0.20	+0.5
3,710,610	+		AO356_16415	0.20	+0.3
3,710,610	+		AO356_16415	0.20	-2.2
3,710,610	+		AO356_16415	0.20	+0.4
3,710,610	+		AO356_16415	0.20	+1.5
3,710,610	+		AO356_16415	0.20	+0.5
3,710,610	+		AO356_16415	0.20	+1.1
3,710,610	+		AO356_16415	0.20	+0.2
3,710,611	-		AO356_16415	0.20	-1.2
3,710,611	-		AO356_16415	0.20	+1.2
3,710,611	-		AO356_16415	0.20	+0.2
3,710,611	-		AO356_16415	0.20	+1.8
3,710,611	-		AO356_16415	0.20	+1.2
3,710,611	-		AO356_16415	0.20	-0.1
3,710,611	-		AO356_16415	0.20	+0.0
3,710,612	+		AO356_16415	0.20	+0.1
3,710,654	+		AO356_16415	0.22	+0.1
3,710,654	+		AO356_16415	0.22	-0.8
3,710,654	+		AO356_16415	0.22	-0.3
3,710,654	+		AO356_16415	0.22	-0.8
3,710,655	-		AO356_16415	0.22	+1.0
3,710,655	-		AO356_16415	0.22	+0.4
3,710,711	+		AO356_16415	0.25	+0.3
3,710,711	+		AO356_16415	0.25	+1.2
3,710,712	-		AO356_16415	0.25	-0.3
3,710,738	+		AO356_16415	0.26	-0.5
3,710,738	+		AO356_16415	0.26	+1.5
3,710,738	+		AO356_16415	0.26	+0.1
3,710,739	-		AO356_16415	0.26	-1.2
3,710,739	-		AO356_16415	0.26	+0.4
3,710,739	-		AO356_16415	0.26	-0.1
3,710,768	+		AO356_16415	0.27	-1.2
3,710,769	-		AO356_16415	0.27	-0.1
3,710,769	-		AO356_16415	0.27	+0.8
3,710,769	-		AO356_16415	0.27	-0.9
3,710,854	-		AO356_16415	0.31	+0.1
3,710,854	-		AO356_16415	0.31	-0.2
3,710,937	-		AO356_16415	0.35	+1.1
3,710,970	+		AO356_16415	0.36	+0.1
3,710,970	+		AO356_16415	0.36	+0.7
3,710,971	-		AO356_16415	0.36	+0.1
3,710,985	+		AO356_16415	0.37	+1.1
3,710,985	+		AO356_16415	0.37	+0.3
3,710,985	+		AO356_16415	0.37	-0.4
3,710,986	-		AO356_16415	0.37	-0.5
3,710,986	-		AO356_16415	0.37	+0.1
3,710,986	-		AO356_16415	0.37	+0.4
3,710,986	-		AO356_16415	0.37	-1.2
3,710,986	-		AO356_16415	0.37	+0.4
3,710,986	-		AO356_16415	0.37	+1.4
3,711,069	+		AO356_16415	0.41	+0.6
3,711,069	+		AO356_16415	0.41	-1.1
3,711,070	-		AO356_16415	0.41	+0.5
3,711,099	+		AO356_16415	0.42	+1.2
3,711,099	+		AO356_16415	0.42	-0.1
3,711,100	-		AO356_16415	0.42	+1.7
3,711,100	-		AO356_16415	0.42	+0.5