Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2235

Experiment: LB no stress 48 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB no stress 48 hours
2,646,113	-		Pf6N2E2_2233	0.84	+0.3
2,646,113	-		Pf6N2E2_2233	0.84	+0.7
2,646,123	+		Pf6N2E2_2233	0.86	-0.2
2,646,123	+		Pf6N2E2_2233	0.86	-0.6
2,646,123	+		Pf6N2E2_2233	0.86	-1.3
2,646,123	+		Pf6N2E2_2233	0.86	-0.4
2,646,123	+		Pf6N2E2_2233	0.86	-0.5
2,646,124	-		Pf6N2E2_2233	0.86	-1.9
2,646,124	-		Pf6N2E2_2233	0.86	+0.1
2,646,124	-		Pf6N2E2_2233	0.86	+1.3
2,646,126	+		Pf6N2E2_2233	0.86	-0.1
2,646,127	-		Pf6N2E2_2233	0.86	+0.7
2,646,150	+		Pf6N2E2_2233	0.89	+0.0
2,646,150	+		Pf6N2E2_2233	0.89	-0.3
2,646,151	-		Pf6N2E2_2233	0.89	+1.0
2,646,151	-		Pf6N2E2_2233	0.89	+0.7
2,646,151	-		Pf6N2E2_2233	0.89	+1.5
2,646,160	+				-0.6
2,646,309	+				+1.0
2,646,309	+				-0.8
2,646,327	+				-0.3
2,646,362	-				+0.1
2,646,379	+				+0.9
2,646,386	+				+0.2
2,646,386	+				+0.3
2,646,386	+				+0.4
2,646,386	+				-0.3
2,646,387	-				-0.3
2,646,387	-				-0.4
2,646,387	-				-0.1
2,646,387	-				+1.7
2,646,387	-				+0.5
2,646,387	-				-0.1
2,646,387	-				+0.7
2,646,390	+				+0.9
2,646,429	+				-0.2
2,646,429	+				+1.3
2,646,429	+				+0.3
2,646,430	-				+0.4
2,646,430	-				+1.6
2,646,430	-				+0.7
2,646,437	-				+0.9
2,646,437	-				-0.5
2,646,667	+		Pf6N2E2_2234	0.47	+0.6
2,646,667	+		Pf6N2E2_2234	0.47	-0.4
2,646,667	+		Pf6N2E2_2234	0.47	+0.4
2,646,667	+		Pf6N2E2_2234	0.47	+0.4
2,646,667	+		Pf6N2E2_2234	0.47	+0.0
2,646,667	+		Pf6N2E2_2234	0.47	-0.6
2,646,667	+		Pf6N2E2_2234	0.47	-1.1
2,646,667	+		Pf6N2E2_2234	0.47	+0.7
2,646,667	+		Pf6N2E2_2234	0.47	-0.6
2,646,668	-		Pf6N2E2_2234	0.47	+0.9
2,646,668	-		Pf6N2E2_2234	0.47	+0.6
2,646,668	-		Pf6N2E2_2234	0.47	+0.5
2,646,668	-		Pf6N2E2_2234	0.47	+0.4
2,646,668	-		Pf6N2E2_2234	0.47	-0.8
2,646,668	-		Pf6N2E2_2234	0.47	+0.0
2,646,685	+		Pf6N2E2_2234	0.52	+2.1
2,646,685	+		Pf6N2E2_2234	0.52	+2.1
2,646,685	+		Pf6N2E2_2234	0.52	+2.1
2,646,685	+		Pf6N2E2_2234	0.52	+0.1
2,646,685	+		Pf6N2E2_2234	0.52	-2.2
2,646,685	+		Pf6N2E2_2234	0.52	-0.1
2,646,685	+		Pf6N2E2_2234	0.52	-0.2
2,646,706	+		Pf6N2E2_2234	0.58	+0.1
2,646,706	+		Pf6N2E2_2234	0.58	+0.1
2,646,707	-		Pf6N2E2_2234	0.58	+2.6
2,646,707	-		Pf6N2E2_2234	0.58	+0.8
2,646,709	+		Pf6N2E2_2234	0.59	+1.1
2,646,709	+		Pf6N2E2_2234	0.59	+1.3
2,646,709	+		Pf6N2E2_2234	0.59	-0.9
2,646,710	-		Pf6N2E2_2234	0.59	+0.4
2,646,730	+		Pf6N2E2_2234	0.65	+0.4
2,646,730	+		Pf6N2E2_2234	0.65	-0.1
2,646,731	-		Pf6N2E2_2234	0.65	-0.4
2,646,734	-		Pf6N2E2_2234	0.66	+0.8
2,646,734	-		Pf6N2E2_2234	0.66	+0.7
2,646,751	+		Pf6N2E2_2234	0.71	-0.8
2,646,751	+		Pf6N2E2_2234	0.71	+0.3
2,646,751	+		Pf6N2E2_2234	0.71	-0.6
2,646,751	+		Pf6N2E2_2234	0.71	-1.2
2,646,751	+		Pf6N2E2_2234	0.71	-2.4
2,646,751	+		Pf6N2E2_2234	0.71	+0.6
2,646,751	+		Pf6N2E2_2234	0.71	+1.4
2,646,751	+		Pf6N2E2_2234	0.71	+2.1
2,646,751	+		Pf6N2E2_2234	0.71	+0.3
2,646,751	+		Pf6N2E2_2234	0.71	+0.4
2,646,751	+		Pf6N2E2_2234	0.71	-1.1
2,646,751	+		Pf6N2E2_2234	0.71	-0.2
2,646,752	-		Pf6N2E2_2234	0.71	-0.6
2,646,752	-		Pf6N2E2_2234	0.71	-0.3
2,646,752	-		Pf6N2E2_2234	0.71	+0.9
2,646,752	-		Pf6N2E2_2234	0.71	-0.3
2,646,752	-		Pf6N2E2_2234	0.71	-1.6
2,646,752	-		Pf6N2E2_2234	0.71	+0.1
2,646,755	+		Pf6N2E2_2234	0.72	+0.1
2,646,755	+		Pf6N2E2_2234	0.72	-0.0
2,646,756	-		Pf6N2E2_2234	0.72	+1.6
2,646,769	+		Pf6N2E2_2234	0.76	-0.3
2,646,769	+		Pf6N2E2_2234	0.76	-0.1
2,646,769	+		Pf6N2E2_2234	0.76	+0.1
2,646,769	+		Pf6N2E2_2234	0.76	+0.5
2,646,770	-		Pf6N2E2_2234	0.76	-0.5
2,646,770	-		Pf6N2E2_2234	0.76	+1.1
2,646,772	+		Pf6N2E2_2234	0.77	-0.5
2,646,772	+		Pf6N2E2_2234	0.77	+0.3
2,646,790	+		Pf6N2E2_2234	0.82	-0.4
2,646,791	-		Pf6N2E2_2234	0.82	+0.6
2,646,793	+		Pf6N2E2_2234	0.83	+0.2
2,646,811	+		Pf6N2E2_2234	0.88	-2.7
2,646,812	-		Pf6N2E2_2234	0.88	+0.5
2,646,812	-		Pf6N2E2_2234	0.88	-0.0
2,646,814	+		Pf6N2E2_2234	0.89	-1.2
2,646,814	+		Pf6N2E2_2234	0.89	+0.1
2,646,814	+		Pf6N2E2_2234	0.89	+0.7
2,646,814	+		Pf6N2E2_2234	0.89	-0.9
2,646,814	+		Pf6N2E2_2234	0.89	-0.5
2,646,814	+		Pf6N2E2_2234	0.89	+0.4
2,646,815	-		Pf6N2E2_2234	0.89	-0.8
2,646,815	-		Pf6N2E2_2234	0.89	-0.3
2,646,815	-		Pf6N2E2_2234	0.89	+0.4
2,646,815	-		Pf6N2E2_2234	0.89	-0.4
2,646,815	-		Pf6N2E2_2234	0.89	+0.4
2,646,818	-				+1.1
2,647,141	+				+0.5
2,647,141	+				-0.2
2,647,142	-				+0.4
2,647,142	-				-1.0
2,647,142	-				-0.1
2,647,142	-				+0.0
2,647,142	-				-0.2
2,647,156	-				-0.1
2,647,156	-				-1.4
2,647,333	+		Pf6N2E2_2235	0.20	+0.5
2,647,334	-		Pf6N2E2_2235	0.20	+0.1
2,647,334	-		Pf6N2E2_2235	0.20	+1.0
2,647,464	+		Pf6N2E2_2235	0.29	-0.2
2,647,464	+		Pf6N2E2_2235	0.29	-0.1
2,647,464	+		Pf6N2E2_2235	0.29	+1.1
2,647,465	-		Pf6N2E2_2235	0.29	-0.2
2,647,980	+		Pf6N2E2_2235	0.63	-0.0
2,647,981	-		Pf6N2E2_2235	0.63	+1.0
2,648,446	+				+0.7
2,648,446	+				-0.8
2,648,446	+				+0.5
2,648,446	+				+1.7
2,648,446	+				+0.8
2,648,447	-				+0.1
2,648,447	-				-0.8
2,648,447	-				-0.5
2,648,474	-				+0.7
2,648,480	+				+1.0
2,648,481	-				-1.1
2,648,610	+				+0.5
2,648,669	+				+0.4
2,648,670	-				+0.3
2,648,816	+		Pf6N2E2_2236	0.18	-0.3
2,648,817	-		Pf6N2E2_2236	0.18	+0.5
2,648,910	-		Pf6N2E2_2236	0.29	+0.5
2,648,910	-		Pf6N2E2_2236	0.29	-0.5
2,648,927	+		Pf6N2E2_2236	0.31	-0.3
2,648,928	-		Pf6N2E2_2236	0.32	+0.7
2,648,963	+		Pf6N2E2_2236	0.36	+0.4
2,648,963	+		Pf6N2E2_2236	0.36	+1.5
2,648,964	-		Pf6N2E2_2236	0.36	+0.3
2,649,032	+		Pf6N2E2_2236	0.44	+0.2
2,649,122	+		Pf6N2E2_2236	0.55	+0.0
2,649,122	+		Pf6N2E2_2236	0.55	-2.3
2,649,122	+		Pf6N2E2_2236	0.55	+0.1
2,649,122	+		Pf6N2E2_2236	0.55	-0.6
2,649,123	-		Pf6N2E2_2236	0.55	+0.1
2,649,136	+		Pf6N2E2_2236	0.57	-0.4
2,649,137	-		Pf6N2E2_2236	0.57	-0.0
2,649,272	+		Pf6N2E2_2236	0.73	+0.7
2,649,272	+		Pf6N2E2_2236	0.73	+0.2
2,649,272	+		Pf6N2E2_2236	0.73	+0.5
2,649,272	+		Pf6N2E2_2236	0.73	+0.4
2,649,273	-		Pf6N2E2_2236	0.73	+1.0
2,649,273	-		Pf6N2E2_2236	0.73	+0.7
2,649,384	+		Pf6N2E2_2236	0.87	+0.4
2,649,458	+				+0.1