Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13230

Experiment: Growth at 10C; with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at 10C; with MOPS
2,989,712	+				+1.7
2,989,712	+				-1.1
2,989,712	+				-0.5
2,989,713	-				+0.6
2,989,713	-				+0.7
2,989,713	-				+0.2
2,989,713	-				+0.7
2,989,731	-				-0.3
2,989,832	-				-0.9
2,989,852	+				+0.2
2,989,852	+				-1.7
2,989,852	+				-0.3
2,989,852	+				+1.5
2,989,852	+				-1.1
2,989,853	-				+0.7
2,989,853	-				+0.1
2,989,853	-				-0.7
2,989,853	-				+2.7
2,989,853	-				-0.1
2,989,853	-				+1.1
2,989,863	-				+0.7
2,989,863	-				-0.8
2,989,863	-				-0.7
2,989,868	-				+0.4
2,989,868	-				-1.4
2,989,868	-				-0.5
2,989,868	-				-1.9
2,989,868	-				+1.3
2,989,868	-				-0.1
2,989,926	-				+1.3
2,989,926	-				+0.1
2,989,926	-				+2.1
2,989,926	-				-0.4
2,989,980	+				-0.7
2,990,099	+		PFLU_RS13225	0.20	-0.5
2,990,099	+		PFLU_RS13225	0.20	-0.8
2,990,099	+		PFLU_RS13225	0.20	-0.1
2,990,099	+		PFLU_RS13225	0.20	+0.0
2,990,150	-		PFLU_RS13225	0.31	+0.5
2,990,150	-		PFLU_RS13225	0.31	-0.1
2,990,150	-		PFLU_RS13225	0.31	+1.8
2,990,150	-		PFLU_RS13225	0.31	+0.9
2,990,286	-		PFLU_RS13225	0.61	-0.8
2,990,386	-		PFLU_RS13225	0.82	-1.4
2,990,386	-		PFLU_RS13225	0.82	+0.7
2,990,446	+				+0.9
2,990,446	+				+0.3
2,990,446	+				-0.4
2,990,446	+				-0.1
2,990,447	-				+2.5
2,990,447	-				-0.5
2,990,447	-				-1.1
2,990,447	-				-1.4
2,990,468	+				-0.1
2,990,468	+				-0.1
2,990,469	-				+1.5
2,990,469	-				-0.4
2,990,469	-				-0.4
2,990,480	+				-0.1
2,990,480	+				-0.7
2,990,481	-				-0.1
2,990,481	-				+1.2
2,990,481	-				+0.9
2,990,481	-				+0.6
2,990,481	-				-0.9
2,990,554	+				+0.9
2,990,554	+				-1.1
2,990,554	+				-2.5
2,990,554	+				-0.7
2,990,554	+				-0.1
2,990,554	+				-0.1
2,990,555	-				-0.5
2,990,555	-				+1.7
2,990,555	-				-0.4
2,990,631	+		PFLU_RS13230	0.11	-0.9
2,990,631	+		PFLU_RS13230	0.11	+0.9
2,990,631	+		PFLU_RS13230	0.11	-0.7
2,990,631	+		PFLU_RS13230	0.11	+0.9
2,990,631	+		PFLU_RS13230	0.11	+0.8
2,990,632	-		PFLU_RS13230	0.11	-0.1
2,990,632	-		PFLU_RS13230	0.11	+0.6
2,990,632	-		PFLU_RS13230	0.11	-0.5
2,990,632	-		PFLU_RS13230	0.11	+0.6
2,990,632	-		PFLU_RS13230	0.11	+1.3
2,990,632	-		PFLU_RS13230	0.11	-1.7
2,990,632	-		PFLU_RS13230	0.11	+0.1
2,990,632	-		PFLU_RS13230	0.11	-0.2
2,990,881	-		PFLU_RS13230	0.28	-0.7
2,990,881	-		PFLU_RS13230	0.28	+1.9
2,990,885	+		PFLU_RS13230	0.28	+0.5
2,990,885	+		PFLU_RS13230	0.28	-0.1
2,990,886	-		PFLU_RS13230	0.29	+1.4
2,990,886	-		PFLU_RS13230	0.29	+0.8
2,990,886	-		PFLU_RS13230	0.29	-0.1
2,990,886	-		PFLU_RS13230	0.29	-1.1
2,991,029	+		PFLU_RS13230	0.39	-1.3
2,991,029	+		PFLU_RS13230	0.39	+0.7
2,991,029	+		PFLU_RS13230	0.39	+0.3
2,991,029	+		PFLU_RS13230	0.39	+0.2
2,991,030	-		PFLU_RS13230	0.39	-0.7
2,991,030	-		PFLU_RS13230	0.39	+0.1
2,991,030	-		PFLU_RS13230	0.39	+1.2
2,991,030	-		PFLU_RS13230	0.39	-0.8
2,991,030	-		PFLU_RS13230	0.39	+0.9
2,991,158	+		PFLU_RS13230	0.48	-1.1
2,991,159	-		PFLU_RS13230	0.48	-0.7
2,991,159	-		PFLU_RS13230	0.48	+0.7
2,991,159	-		PFLU_RS13230	0.48	+1.1
2,991,346	-		PFLU_RS13230	0.61	-0.4
2,991,346	-		PFLU_RS13230	0.61	+1.2
2,991,432	+		PFLU_RS13230	0.67	+0.9
2,991,432	+		PFLU_RS13230	0.67	-1.7
2,991,432	+		PFLU_RS13230	0.67	+0.4
2,991,432	+		PFLU_RS13230	0.67	+0.5
2,991,433	-		PFLU_RS13230	0.67	-1.7
2,991,433	-		PFLU_RS13230	0.67	-0.3
2,991,433	-		PFLU_RS13230	0.67	-0.8
2,991,433	-		PFLU_RS13230	0.67	+0.9
2,991,433	-		PFLU_RS13230	0.67	-0.7
2,991,433	-		PFLU_RS13230	0.67	-1.5
2,991,433	-		PFLU_RS13230	0.67	-0.3
2,991,433	-		PFLU_RS13230	0.67	-0.0
2,991,609	+		PFLU_RS13230	0.79	-1.2
2,991,609	+		PFLU_RS13230	0.79	+0.1
2,991,610	-		PFLU_RS13230	0.79	-0.8
2,991,723	-		PFLU_RS13230	0.87	+0.7
2,991,723	-		PFLU_RS13230	0.87	-0.9
2,991,858	-				+1.5
2,991,873	+				-0.6
2,991,956	+				+1.3
2,991,957	-				+0.7
2,991,957	-				+0.1
2,991,970	+				-0.2
2,991,971	-				-1.1
2,991,978	+				-0.9
2,991,982	+				-1.4
2,991,983	-				-0.7
2,991,983	-				-0.7
2,991,984	+				+0.0
2,991,984	+				+0.9
2,991,985	-				-2.1
2,992,025	+				+0.9
2,992,026	-				+0.5
2,992,026	-				-0.9
2,992,026	-				+0.1
2,992,027	+				+1.7
2,992,027	+				-0.9
2,992,027	+				-0.9
2,992,027	+				+0.6
2,992,028	-				+0.7
2,992,028	-				-1.4
2,992,028	-				-1.0
2,992,028	-				-2.2
2,992,028	-				+0.1
2,992,028	-				-0.5
2,992,028	-				+0.3
2,992,142	+				+1.2
2,992,142	+				-0.9
2,992,142	+				-1.9
2,992,142	+				+1.6
2,992,142	+				+0.5
2,992,142	+				-0.7
2,992,143	-				+0.6
2,992,143	-				+0.9
2,992,143	-				-0.1
2,992,208	-				-0.3
2,992,208	-				-0.9
2,992,216	+				-0.1
2,992,217	-				-1.2
2,992,327	+		PFLU_RS13235	0.11	-2.1
2,992,327	+		PFLU_RS13235	0.11	-1.9
2,992,327	+		PFLU_RS13235	0.11	+0.3
2,992,328	-		PFLU_RS13235	0.11	+0.9
2,992,328	-		PFLU_RS13235	0.11	+0.3
2,992,328	-		PFLU_RS13235	0.11	-0.8
2,992,328	-		PFLU_RS13235	0.11	+0.8
2,992,328	-		PFLU_RS13235	0.11	+0.9
2,992,330	+		PFLU_RS13235	0.12	-0.9
2,992,330	+		PFLU_RS13235	0.12	+0.7
2,992,330	+		PFLU_RS13235	0.12	-1.7
2,992,330	+		PFLU_RS13235	0.12	+0.8
2,992,330	+		PFLU_RS13235	0.12	-0.3
2,992,331	-		PFLU_RS13235	0.12	+0.5
2,992,460	+		PFLU_RS13235	0.19	-0.9
2,992,485	+		PFLU_RS13235	0.21	-0.9
2,992,485	+		PFLU_RS13235	0.21	+0.9
2,992,485	+		PFLU_RS13235	0.21	+1.5
2,992,485	+		PFLU_RS13235	0.21	-0.3
2,992,486	-		PFLU_RS13235	0.21	+0.4
2,992,486	-		PFLU_RS13235	0.21	+0.3
2,992,515	+		PFLU_RS13235	0.23	-1.3
2,992,515	+		PFLU_RS13235	0.23	+0.0
2,992,515	+		PFLU_RS13235	0.23	-1.2
2,992,515	+		PFLU_RS13235	0.23	-0.4
2,992,515	+		PFLU_RS13235	0.23	+0.0
2,992,515	+		PFLU_RS13235	0.23	-1.8
2,992,515	+		PFLU_RS13235	0.23	+1.9
2,992,516	-		PFLU_RS13235	0.23	+1.2
2,992,516	-		PFLU_RS13235	0.23	+0.9
2,992,516	-		PFLU_RS13235	0.23	-0.4
2,992,516	-		PFLU_RS13235	0.23	+1.4
2,992,516	-		PFLU_RS13235	0.23	-1.2
2,992,516	-		PFLU_RS13235	0.23	-0.1
2,992,516	-		PFLU_RS13235	0.23	-0.8
2,992,516	-		PFLU_RS13235	0.23	+0.4
2,992,516	-		PFLU_RS13235	0.23	+0.3
2,992,516	-		PFLU_RS13235	0.23	-0.4
2,992,516	-		PFLU_RS13235	0.23	+2.0
2,992,535	+		PFLU_RS13235	0.24	+0.9
2,992,589	+		PFLU_RS13235	0.27	-1.5
2,992,589	+		PFLU_RS13235	0.27	+1.3
2,992,696	-		PFLU_RS13235	0.34	+0.3