Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3603 and Ga0059261_3604 overlap by 4 nucleotides Ga0059261_3604 and Ga0059261_3605 are separated by 65 nucleotides Ga0059261_3605 and Ga0059261_3606 are separated by 235 nucleotides Ga0059261_3606 and Ga0059261_3607 are separated by 121 nucleotides
Ga0059261_3603: Ga0059261_3603 - Predicted amidohydrolase, at 3,723,240 to 3,724,067
_3603
Ga0059261_3604: Ga0059261_3604 - Uncharacterized protein conserved in bacteria, at 3,724,064 to 3,724,501
_3604
Ga0059261_3605: Ga0059261_3605 - tRNA, at 3,724,567 to 3,724,643
_3605
Ga0059261_3606: Ga0059261_3606 - Transcription elongation factor, at 3,724,879 to 3,725,292
_3606
Ga0059261_3607: Ga0059261_3607 - TonB-dependent siderophore receptor, at 3,725,414 to 3,727,756
_3607
Position (kb)
3724
3725 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3723.571 kb on - strand, within Ga0059261_3603 at 3723.636 kb on + strand at 3723.636 kb on + strand, within Ga0059261_3603 at 3723.636 kb on + strand, within Ga0059261_3603 at 3723.636 kb on + strand, within Ga0059261_3603 at 3723.636 kb on + strand, within Ga0059261_3603 at 3723.637 kb on - strand, within Ga0059261_3603 at 3723.637 kb on - strand, within Ga0059261_3603 at 3723.637 kb on - strand, within Ga0059261_3603 at 3723.637 kb on - strand, within Ga0059261_3603 at 3723.637 kb on - strand, within Ga0059261_3603 at 3723.702 kb on + strand, within Ga0059261_3603 at 3723.702 kb on + strand, within Ga0059261_3603 at 3723.702 kb on + strand, within Ga0059261_3603 at 3723.702 kb on + strand, within Ga0059261_3603 at 3723.702 kb on + strand, within Ga0059261_3603 at 3723.702 kb on + strand, within Ga0059261_3603 at 3723.703 kb on - strand, within Ga0059261_3603 at 3723.703 kb on - strand, within Ga0059261_3603 at 3723.897 kb on + strand, within Ga0059261_3603 at 3723.897 kb on + strand, within Ga0059261_3603 at 3723.897 kb on + strand, within Ga0059261_3603 at 3723.898 kb on - strand, within Ga0059261_3603 at 3723.898 kb on - strand, within Ga0059261_3603 at 3723.898 kb on - strand, within Ga0059261_3603 at 3724.133 kb on + strand, within Ga0059261_3604 at 3724.247 kb on - strand, within Ga0059261_3604 at 3724.517 kb on + strand at 3724.517 kb on + strand at 3724.517 kb on + strand at 3724.518 kb on - strand at 3724.551 kb on + strand at 3724.551 kb on + strand at 3724.575 kb on - strand, within Ga0059261_3605 at 3724.588 kb on - strand, within Ga0059261_3605 at 3724.588 kb on - strand at 3724.604 kb on - strand, within Ga0059261_3605 at 3724.769 kb on + strand at 3724.769 kb on + strand at 3724.857 kb on + strand at 3724.857 kb on + strand at 3724.857 kb on + strand at 3724.858 kb on - strand at 3724.858 kb on - strand at 3724.858 kb on - strand at 3724.858 kb on - strand at 3724.858 kb on - strand at 3724.858 kb on - strand at 3724.876 kb on - strand at 3724.920 kb on + strand at 3724.920 kb on + strand at 3724.921 kb on - strand, within Ga0059261_3606 at 3724.921 kb on - strand, within Ga0059261_3606 at 3724.921 kb on - strand, within Ga0059261_3606 at 3724.921 kb on - strand, within Ga0059261_3606 at 3725.084 kb on - strand, within Ga0059261_3606 at 3725.145 kb on + strand, within Ga0059261_3606 at 3725.285 kb on + strand at 3725.285 kb on + strand at 3725.285 kb on + strand at 3725.285 kb on + strand at 3725.285 kb on + strand at 3725.285 kb on + strand at 3725.370 kb on + strand at 3725.370 kb on + strand at 3725.371 kb on - strand at 3725.371 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 3,723,571 - Ga0059261_3603 0.40 +1.1 3,723,636 + -0.1 3,723,636 + Ga0059261_3603 0.48 -0.2 3,723,636 + Ga0059261_3603 0.48 -0.5 3,723,636 + Ga0059261_3603 0.48 +0.5 3,723,636 + Ga0059261_3603 0.48 +0.1 3,723,637 - Ga0059261_3603 0.48 +0.7 3,723,637 - Ga0059261_3603 0.48 -0.1 3,723,637 - Ga0059261_3603 0.48 -1.0 3,723,637 - Ga0059261_3603 0.48 -0.1 3,723,637 - Ga0059261_3603 0.48 +0.1 3,723,702 + Ga0059261_3603 0.56 +0.5 3,723,702 + Ga0059261_3603 0.56 -0.3 3,723,702 + Ga0059261_3603 0.56 +0.9 3,723,702 + Ga0059261_3603 0.56 +0.3 3,723,702 + Ga0059261_3603 0.56 -0.4 3,723,702 + Ga0059261_3603 0.56 -0.8 3,723,703 - Ga0059261_3603 0.56 +0.3 3,723,703 - Ga0059261_3603 0.56 -1.6 3,723,897 + Ga0059261_3603 0.79 +0.1 3,723,897 + Ga0059261_3603 0.79 +0.2 3,723,897 + Ga0059261_3603 0.79 -1.1 3,723,898 - Ga0059261_3603 0.79 -0.8 3,723,898 - Ga0059261_3603 0.79 +1.7 3,723,898 - Ga0059261_3603 0.79 -0.5 3,724,133 + Ga0059261_3604 0.16 -0.9 3,724,247 - Ga0059261_3604 0.42 -0.4 3,724,517 + +0.1 3,724,517 + -0.5 3,724,517 + -0.1 3,724,518 - +0.4 3,724,551 + -0.5 3,724,551 + +2.1 3,724,575 - Ga0059261_3605 0.10 +2.6 3,724,588 - Ga0059261_3605 0.27 +2.9 3,724,588 - +3.6 3,724,604 - Ga0059261_3605 0.48 +2.7 3,724,769 + +0.7 3,724,769 + +0.2 3,724,857 + +1.9 3,724,857 + -0.1 3,724,857 + -1.3 3,724,858 - +0.6 3,724,858 - -0.6 3,724,858 - +1.9 3,724,858 - +0.5 3,724,858 - +0.5 3,724,858 - -0.6 3,724,876 - +1.9 3,724,920 + -1.2 3,724,920 + +0.2 3,724,921 - Ga0059261_3606 0.10 -0.5 3,724,921 - Ga0059261_3606 0.10 +0.0 3,724,921 - Ga0059261_3606 0.10 -0.6 3,724,921 - Ga0059261_3606 0.10 +0.4 3,725,084 - Ga0059261_3606 0.50 +0.0 3,725,145 + Ga0059261_3606 0.64 +0.3 3,725,285 + -1.0 3,725,285 + +0.4 3,725,285 + -0.1 3,725,285 + +0.5 3,725,285 + -0.1 3,725,285 + +0.1 3,725,370 + +0.2 3,725,370 + +0.1 3,725,371 - -0.0 3,725,371 - -1.0
Or see this region's nucleotide sequence