Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14155 and AO356_14160 are separated by 119 nucleotides AO356_14160 and AO356_14165 are separated by 276 nucleotides AO356_14165 and AO356_14170 are separated by 481 nucleotides
AO356_14155: AO356_14155 - dethiobiotin synthetase, at 3,213,862 to 3,214,542
_14155
AO356_14160: AO356_14160 - pyrroloquinoline quinone biosynthesis protein PqqE, at 3,214,662 to 3,214,958
_14160
AO356_14165: AO356_14165 - Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) , at 3,215,235 to 3,217,040
_14165
AO356_14170: AO356_14170 - hypothetical protein, at 3,217,522 to 3,218,013
_14170
Position (kb)
3215
3216
3217
3218 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3214.563 kb on + strand at 3214.563 kb on + strand at 3214.679 kb on + strand at 3214.689 kb on + strand at 3214.689 kb on + strand at 3214.689 kb on + strand at 3214.689 kb on + strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.805 kb on - strand, within AO356_14160 at 3214.805 kb on - strand, within AO356_14160 at 3214.805 kb on - strand, within AO356_14160 at 3214.947 kb on - strand at 3214.947 kb on - strand at 3214.947 kb on - strand at 3214.992 kb on + strand at 3214.993 kb on - strand at 3215.013 kb on + strand at 3215.014 kb on - strand at 3215.021 kb on + strand at 3215.021 kb on + strand at 3215.022 kb on - strand at 3215.022 kb on - strand at 3215.033 kb on - strand at 3215.033 kb on - strand at 3215.044 kb on - strand at 3215.044 kb on - strand at 3215.148 kb on - strand at 3215.148 kb on - strand at 3215.153 kb on + strand at 3215.153 kb on + strand at 3215.154 kb on - strand at 3215.212 kb on + strand at 3215.213 kb on - strand at 3215.244 kb on + strand at 3215.244 kb on + strand at 3215.244 kb on + strand at 3215.244 kb on + strand at 3215.244 kb on + strand at 3215.244 kb on + strand at 3215.245 kb on - strand at 3215.245 kb on - strand at 3215.245 kb on - strand at 3215.245 kb on - strand at 3215.245 kb on - strand at 3215.307 kb on + strand at 3215.307 kb on + strand at 3215.307 kb on + strand at 3215.308 kb on - strand at 3215.308 kb on - strand at 3215.308 kb on - strand at 3215.481 kb on + strand, within AO356_14165 at 3215.481 kb on + strand, within AO356_14165 at 3215.481 kb on + strand, within AO356_14165 at 3215.482 kb on - strand, within AO356_14165 at 3215.482 kb on - strand, within AO356_14165 at 3215.482 kb on - strand, within AO356_14165 at 3215.482 kb on - strand, within AO356_14165 at 3215.482 kb on - strand, within AO356_14165 at 3215.614 kb on - strand, within AO356_14165 at 3215.661 kb on - strand, within AO356_14165 at 3215.682 kb on + strand, within AO356_14165 at 3215.682 kb on + strand, within AO356_14165 at 3215.682 kb on + strand, within AO356_14165 at 3215.682 kb on + strand, within AO356_14165 at 3215.683 kb on - strand, within AO356_14165 at 3215.683 kb on - strand, within AO356_14165 at 3215.683 kb on - strand, within AO356_14165 at 3215.764 kb on + strand, within AO356_14165 at 3215.764 kb on + strand, within AO356_14165 at 3215.764 kb on + strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.799 kb on + strand, within AO356_14165 at 3215.799 kb on + strand, within AO356_14165 at 3215.799 kb on + strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.872 kb on + strand, within AO356_14165 at 3215.872 kb on + strand, within AO356_14165 at 3215.872 kb on + strand, within AO356_14165 at 3215.873 kb on - strand, within AO356_14165 at 3215.873 kb on - strand, within AO356_14165 at 3215.873 kb on - strand, within AO356_14165 at 3216.183 kb on + strand, within AO356_14165 at 3216.311 kb on + strand, within AO356_14165 at 3216.327 kb on + strand, within AO356_14165 at 3216.327 kb on + strand, within AO356_14165 at 3216.327 kb on + strand, within AO356_14165 at 3216.327 kb on + strand, within AO356_14165 at 3216.327 kb on + strand, within AO356_14165 at 3216.327 kb on + strand, within AO356_14165 at 3216.327 kb on + strand, within AO356_14165 at 3216.328 kb on - strand, within AO356_14165 at 3216.328 kb on - strand, within AO356_14165 at 3216.328 kb on - strand, within AO356_14165 at 3216.328 kb on - strand, within AO356_14165 at 3216.328 kb on - strand, within AO356_14165 at 3216.328 kb on - strand, within AO356_14165 at 3216.328 kb on - strand, within AO356_14165 at 3216.361 kb on - strand, within AO356_14165 at 3216.361 kb on - strand, within AO356_14165 at 3216.361 kb on - strand, within AO356_14165 at 3216.481 kb on - strand, within AO356_14165 at 3216.481 kb on - strand, within AO356_14165 at 3216.481 kb on - strand, within AO356_14165 at 3216.539 kb on + strand, within AO356_14165 at 3216.539 kb on + strand, within AO356_14165 at 3216.539 kb on + strand, within AO356_14165 at 3216.552 kb on + strand, within AO356_14165 at 3216.552 kb on + strand, within AO356_14165 at 3216.553 kb on - strand, within AO356_14165 at 3216.553 kb on - strand, within AO356_14165 at 3216.553 kb on - strand, within AO356_14165 at 3216.553 kb on - strand, within AO356_14165 at 3216.596 kb on + strand, within AO356_14165 at 3216.596 kb on + strand, within AO356_14165 at 3216.597 kb on - strand, within AO356_14165 at 3216.801 kb on + strand, within AO356_14165 at 3216.801 kb on + strand, within AO356_14165 at 3216.802 kb on - strand, within AO356_14165 at 3216.802 kb on - strand, within AO356_14165 at 3216.810 kb on + strand, within AO356_14165 at 3216.810 kb on + strand, within AO356_14165 at 3216.811 kb on - strand, within AO356_14165 at 3216.811 kb on - strand, within AO356_14165 at 3216.811 kb on - strand, within AO356_14165 at 3216.834 kb on + strand, within AO356_14165 at 3216.834 kb on + strand, within AO356_14165 at 3216.834 kb on + strand, within AO356_14165 at 3216.834 kb on + strand, within AO356_14165 at 3216.903 kb on + strand at 3216.903 kb on + strand at 3216.903 kb on + strand at 3216.904 kb on - strand at 3216.904 kb on - strand at 3216.904 kb on - strand at 3216.904 kb on - strand at 3216.904 kb on - strand at 3216.933 kb on + strand at 3216.933 kb on + strand at 3216.933 kb on + strand at 3217.036 kb on - strand at 3217.036 kb on - strand at 3217.038 kb on + strand at 3217.038 kb on + strand at 3217.038 kb on + strand at 3217.038 kb on + strand at 3217.038 kb on + strand at 3217.038 kb on + strand at 3217.038 kb on + strand at 3217.038 kb on + strand at 3217.039 kb on - strand at 3217.039 kb on - strand at 3217.039 kb on - strand at 3217.039 kb on - strand at 3217.039 kb on - strand at 3217.039 kb on - strand at 3217.045 kb on + strand at 3217.156 kb on + strand at 3217.157 kb on - strand at 3217.254 kb on - strand at 3217.257 kb on + strand at 3217.257 kb on + strand at 3217.257 kb on + strand at 3217.257 kb on + strand at 3217.258 kb on - strand at 3217.258 kb on - strand at 3217.258 kb on - strand at 3217.258 kb on - strand at 3217.258 kb on - strand at 3217.277 kb on + strand at 3217.278 kb on - strand at 3217.371 kb on - strand at 3217.463 kb on + strand at 3217.464 kb on - strand at 3217.498 kb on + strand at 3217.498 kb on + strand at 3217.498 kb on + strand at 3217.499 kb on - strand at 3217.531 kb on - strand at 3217.531 kb on - strand at 3217.660 kb on - strand, within AO356_14170 at 3217.777 kb on + strand, within AO356_14170 at 3217.777 kb on + strand, within AO356_14170 at 3217.777 kb on + strand, within AO356_14170 at 3217.777 kb on + strand, within AO356_14170 at 3217.777 kb on + strand, within AO356_14170 at 3217.777 kb on + strand, within AO356_14170 at 3217.777 kb on + strand, within AO356_14170 at 3217.777 kb on + strand, within AO356_14170 at 3217.777 kb on + strand, within AO356_14170 at 3217.777 kb on + strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.778 kb on - strand, within AO356_14170 at 3217.882 kb on + strand, within AO356_14170 at 3217.882 kb on + strand, within AO356_14170 at 3217.882 kb on + strand, within AO356_14170 at 3217.883 kb on - strand, within AO356_14170
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 3,214,563 + -0.5 3,214,563 + +0.5 3,214,679 + +1.1 3,214,689 + +0.0 3,214,689 + +1.7 3,214,689 + +0.2 3,214,689 + +0.1 3,214,690 - +0.4 3,214,690 - -0.7 3,214,690 - -0.8 3,214,690 - +1.1 3,214,690 - +0.6 3,214,690 - +0.6 3,214,804 + AO356_14160 0.48 +0.5 3,214,804 + AO356_14160 0.48 +1.8 3,214,804 + AO356_14160 0.48 -0.5 3,214,804 + AO356_14160 0.48 -0.4 3,214,804 + AO356_14160 0.48 -0.4 3,214,805 - AO356_14160 0.48 -0.5 3,214,805 - AO356_14160 0.48 -0.6 3,214,805 - AO356_14160 0.48 -0.1 3,214,947 - +1.0 3,214,947 - +0.7 3,214,947 - +1.0 3,214,992 + +0.5 3,214,993 - +0.3 3,215,013 + +1.5 3,215,014 - +0.7 3,215,021 + -0.6 3,215,021 + +0.5 3,215,022 - -0.3 3,215,022 - -0.2 3,215,033 - -0.5 3,215,033 - +0.5 3,215,044 - -0.9 3,215,044 - +0.9 3,215,148 - -0.7 3,215,148 - -0.4 3,215,153 + +0.3 3,215,153 + +0.9 3,215,154 - +0.5 3,215,212 + +0.1 3,215,213 - +0.2 3,215,244 + -0.6 3,215,244 + -0.1 3,215,244 + +0.3 3,215,244 + +0.8 3,215,244 + -0.4 3,215,244 + +0.1 3,215,245 - +0.3 3,215,245 - -0.1 3,215,245 - -0.2 3,215,245 - -0.2 3,215,245 - -0.2 3,215,307 + +0.7 3,215,307 + +0.3 3,215,307 + +0.9 3,215,308 - -0.3 3,215,308 - +0.9 3,215,308 - -0.5 3,215,481 + AO356_14165 0.14 +1.5 3,215,481 + AO356_14165 0.14 +0.2 3,215,481 + AO356_14165 0.14 -0.2 3,215,482 - AO356_14165 0.14 -0.1 3,215,482 - AO356_14165 0.14 +0.2 3,215,482 - AO356_14165 0.14 -0.3 3,215,482 - AO356_14165 0.14 +0.1 3,215,482 - AO356_14165 0.14 +2.1 3,215,614 - AO356_14165 0.21 +0.2 3,215,661 - AO356_14165 0.24 -0.9 3,215,682 + AO356_14165 0.25 +0.4 3,215,682 + AO356_14165 0.25 +0.3 3,215,682 + AO356_14165 0.25 -0.0 3,215,682 + AO356_14165 0.25 +0.2 3,215,683 - AO356_14165 0.25 +1.5 3,215,683 - AO356_14165 0.25 -1.0 3,215,683 - AO356_14165 0.25 -0.7 3,215,764 + AO356_14165 0.29 +0.5 3,215,764 + AO356_14165 0.29 -0.0 3,215,764 + AO356_14165 0.29 -0.1 3,215,765 - AO356_14165 0.29 -0.3 3,215,765 - AO356_14165 0.29 -0.6 3,215,765 - AO356_14165 0.29 +0.3 3,215,765 - AO356_14165 0.29 -0.9 3,215,765 - AO356_14165 0.29 +0.3 3,215,765 - AO356_14165 0.29 +0.4 3,215,765 - AO356_14165 0.29 +0.0 3,215,799 + AO356_14165 0.31 -0.3 3,215,799 + AO356_14165 0.31 +0.9 3,215,799 + AO356_14165 0.31 +0.1 3,215,800 - AO356_14165 0.31 +0.3 3,215,800 - AO356_14165 0.31 +0.6 3,215,800 - AO356_14165 0.31 +0.5 3,215,800 - AO356_14165 0.31 +0.5 3,215,800 - AO356_14165 0.31 -0.1 3,215,800 - AO356_14165 0.31 -0.3 3,215,800 - AO356_14165 0.31 +0.1 3,215,872 + AO356_14165 0.35 +0.3 3,215,872 + AO356_14165 0.35 -0.5 3,215,872 + AO356_14165 0.35 +0.3 3,215,873 - AO356_14165 0.35 +0.8 3,215,873 - AO356_14165 0.35 -0.6 3,215,873 - AO356_14165 0.35 +0.4 3,216,183 + AO356_14165 0.52 +0.4 3,216,311 + AO356_14165 0.60 -0.7 3,216,327 + AO356_14165 0.60 +1.5 3,216,327 + AO356_14165 0.60 +1.8 3,216,327 + AO356_14165 0.60 +0.8 3,216,327 + AO356_14165 0.60 -1.4 3,216,327 + AO356_14165 0.60 -0.2 3,216,327 + AO356_14165 0.60 -1.1 3,216,327 + AO356_14165 0.60 -0.4 3,216,328 - AO356_14165 0.61 +0.4 3,216,328 - AO356_14165 0.61 +0.8 3,216,328 - AO356_14165 0.61 -0.6 3,216,328 - AO356_14165 0.61 -0.8 3,216,328 - AO356_14165 0.61 -0.4 3,216,328 - AO356_14165 0.61 +0.4 3,216,328 - AO356_14165 0.61 -0.1 3,216,361 - AO356_14165 0.62 +0.8 3,216,361 - AO356_14165 0.62 +0.5 3,216,361 - AO356_14165 0.62 +0.6 3,216,481 - AO356_14165 0.69 +0.3 3,216,481 - AO356_14165 0.69 -0.3 3,216,481 - AO356_14165 0.69 -0.3 3,216,539 + AO356_14165 0.72 -0.4 3,216,539 + AO356_14165 0.72 -0.5 3,216,539 + AO356_14165 0.72 -0.6 3,216,552 + AO356_14165 0.73 +0.1 3,216,552 + AO356_14165 0.73 +1.0 3,216,553 - AO356_14165 0.73 -0.1 3,216,553 - AO356_14165 0.73 +0.2 3,216,553 - AO356_14165 0.73 -0.1 3,216,553 - AO356_14165 0.73 -1.0 3,216,596 + AO356_14165 0.75 -0.1 3,216,596 + AO356_14165 0.75 -1.0 3,216,597 - AO356_14165 0.75 +0.2 3,216,801 + AO356_14165 0.87 +0.3 3,216,801 + AO356_14165 0.87 -0.1 3,216,802 - AO356_14165 0.87 +0.9 3,216,802 - AO356_14165 0.87 +0.1 3,216,810 + AO356_14165 0.87 +0.2 3,216,810 + AO356_14165 0.87 +0.0 3,216,811 - AO356_14165 0.87 +0.7 3,216,811 - AO356_14165 0.87 +0.2 3,216,811 - AO356_14165 0.87 +0.3 3,216,834 + AO356_14165 0.89 +0.5 3,216,834 + AO356_14165 0.89 +0.9 3,216,834 + AO356_14165 0.89 -0.3 3,216,834 + AO356_14165 0.89 -0.7 3,216,903 + -0.5 3,216,903 + -0.3 3,216,903 + +0.2 3,216,904 - -0.6 3,216,904 - +0.4 3,216,904 - +0.8 3,216,904 - -0.6 3,216,904 - +1.0 3,216,933 + +0.4 3,216,933 + +0.4 3,216,933 + +0.8 3,217,036 - -0.2 3,217,036 - -0.6 3,217,038 + -0.3 3,217,038 + -0.6 3,217,038 + +1.2 3,217,038 + -0.3 3,217,038 + -0.0 3,217,038 + +0.2 3,217,038 + +0.9 3,217,038 + -0.1 3,217,039 - +0.7 3,217,039 - +0.8 3,217,039 - +0.9 3,217,039 - -2.0 3,217,039 - +0.3 3,217,039 - +0.5 3,217,045 + -0.4 3,217,156 + -0.2 3,217,157 - +0.6 3,217,254 - -0.5 3,217,257 + +0.3 3,217,257 + +0.1 3,217,257 + +0.2 3,217,257 + -0.0 3,217,258 - -1.0 3,217,258 - +0.7 3,217,258 - -0.3 3,217,258 - +0.5 3,217,258 - -0.3 3,217,277 + -0.0 3,217,278 - -0.3 3,217,371 - -0.1 3,217,463 + -0.3 3,217,464 - +0.9 3,217,498 + +0.4 3,217,498 + -0.1 3,217,498 + -0.9 3,217,499 - -0.7 3,217,531 - +0.6 3,217,531 - -0.3 3,217,660 - AO356_14170 0.28 +0.8 3,217,777 + AO356_14170 0.52 +0.9 3,217,777 + AO356_14170 0.52 +0.7 3,217,777 + AO356_14170 0.52 +0.5 3,217,777 + AO356_14170 0.52 -0.3 3,217,777 + AO356_14170 0.52 -0.3 3,217,777 + AO356_14170 0.52 -0.6 3,217,777 + AO356_14170 0.52 -0.2 3,217,777 + AO356_14170 0.52 +0.5 3,217,777 + AO356_14170 0.52 -0.0 3,217,777 + AO356_14170 0.52 -1.2 3,217,778 - AO356_14170 0.52 +1.8 3,217,778 - AO356_14170 0.52 +1.0 3,217,778 - AO356_14170 0.52 +2.0 3,217,778 - AO356_14170 0.52 -0.9 3,217,778 - AO356_14170 0.52 -1.9 3,217,778 - AO356_14170 0.52 +0.3 3,217,778 - AO356_14170 0.52 -0.8 3,217,778 - AO356_14170 0.52 -0.1 3,217,778 - AO356_14170 0.52 +0.4 3,217,778 - AO356_14170 0.52 +0.5 3,217,778 - AO356_14170 0.52 +0.6 3,217,778 - AO356_14170 0.52 -0.5 3,217,778 - AO356_14170 0.52 +1.0 3,217,882 + AO356_14170 0.73 +0.1 3,217,882 + AO356_14170 0.73 +0.2 3,217,882 + AO356_14170 0.73 +0.3 3,217,883 - AO356_14170 0.73 -0.1
Or see this region's nucleotide sequence