Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07970 and AO356_07975 are separated by 534 nucleotides AO356_07975 and AO356_07980 are separated by 11 nucleotides
AO356_07970: AO356_07970 - thymidylate synthase, at 1,785,915 to 1,786,496
_07970
AO356_07975: AO356_07975 - ABC transporter, at 1,787,031 to 1,788,584
_07975
AO356_07980: AO356_07980 - sugar ABC transporter permease, at 1,788,596 to 1,789,702
_07980
Position (kb)
1787
1788
1789 Strain fitness (log2 ratio)
-1
0
1
2 at 1786.086 kb on + strand, within AO356_07970 at 1786.237 kb on - strand, within AO356_07970 at 1786.310 kb on + strand, within AO356_07970 at 1786.310 kb on + strand, within AO356_07970 at 1786.311 kb on - strand, within AO356_07970 at 1786.311 kb on - strand, within AO356_07970 at 1786.311 kb on - strand, within AO356_07970 at 1786.402 kb on + strand, within AO356_07970 at 1786.403 kb on - strand, within AO356_07970 at 1786.595 kb on + strand at 1786.595 kb on + strand at 1786.704 kb on + strand at 1786.704 kb on + strand at 1786.705 kb on - strand at 1786.726 kb on + strand at 1786.726 kb on + strand at 1786.726 kb on + strand at 1786.727 kb on - strand at 1786.727 kb on - strand at 1786.754 kb on + strand at 1786.754 kb on + strand at 1786.754 kb on + strand at 1786.754 kb on + strand at 1786.754 kb on + strand at 1786.873 kb on + strand at 1786.873 kb on + strand at 1786.873 kb on + strand at 1786.873 kb on + strand at 1786.874 kb on - strand at 1786.874 kb on - strand at 1786.929 kb on + strand at 1786.974 kb on + strand at 1787.192 kb on + strand, within AO356_07975 at 1787.192 kb on + strand, within AO356_07975 at 1787.192 kb on + strand, within AO356_07975 at 1787.192 kb on + strand, within AO356_07975 at 1787.192 kb on + strand, within AO356_07975 at 1787.192 kb on + strand, within AO356_07975 at 1787.192 kb on + strand, within AO356_07975 at 1787.193 kb on - strand, within AO356_07975 at 1787.193 kb on - strand, within AO356_07975 at 1787.193 kb on - strand, within AO356_07975 at 1787.193 kb on - strand, within AO356_07975 at 1787.193 kb on - strand, within AO356_07975 at 1787.193 kb on - strand, within AO356_07975 at 1787.193 kb on - strand, within AO356_07975 at 1787.196 kb on + strand, within AO356_07975 at 1787.196 kb on + strand, within AO356_07975 at 1787.197 kb on - strand, within AO356_07975 at 1787.418 kb on + strand, within AO356_07975 at 1787.621 kb on + strand, within AO356_07975 at 1787.621 kb on + strand, within AO356_07975 at 1787.622 kb on - strand, within AO356_07975 at 1787.775 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1788.214 kb on + strand, within AO356_07975 at 1788.580 kb on + strand at 1788.658 kb on - strand at 1788.734 kb on + strand, within AO356_07980 at 1788.734 kb on + strand, within AO356_07980 at 1788.734 kb on + strand, within AO356_07980 at 1788.734 kb on + strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.836 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.059 kb on - strand, within AO356_07980 at 1789.059 kb on - strand, within AO356_07980 at 1789.059 kb on - strand, within AO356_07980 at 1789.202 kb on + strand, within AO356_07980 at 1789.202 kb on + strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.440 kb on - strand, within AO356_07980 at 1789.440 kb on - strand, within AO356_07980 at 1789.450 kb on + strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 1,786,086 + AO356_07970 0.29 +0.6 1,786,237 - AO356_07970 0.55 +0.4 1,786,310 + AO356_07970 0.68 +0.4 1,786,310 + AO356_07970 0.68 -1.2 1,786,311 - AO356_07970 0.68 +0.5 1,786,311 - AO356_07970 0.68 +1.2 1,786,311 - AO356_07970 0.68 +1.7 1,786,402 + AO356_07970 0.84 +0.1 1,786,403 - AO356_07970 0.84 +0.6 1,786,595 + -0.3 1,786,595 + +1.3 1,786,704 + -0.5 1,786,704 + -0.6 1,786,705 - -1.4 1,786,726 + +0.6 1,786,726 + -0.9 1,786,726 + +1.0 1,786,727 - -1.3 1,786,727 - +0.9 1,786,754 + -0.0 1,786,754 + +0.3 1,786,754 + -0.1 1,786,754 + +0.7 1,786,754 + -0.1 1,786,873 + +0.9 1,786,873 + +0.8 1,786,873 + -0.0 1,786,873 + +0.2 1,786,874 - -0.2 1,786,874 - -0.3 1,786,929 + -0.3 1,786,974 + -0.1 1,787,192 + AO356_07975 0.10 +0.1 1,787,192 + AO356_07975 0.10 -0.6 1,787,192 + AO356_07975 0.10 +0.8 1,787,192 + AO356_07975 0.10 +0.1 1,787,192 + AO356_07975 0.10 +0.9 1,787,192 + AO356_07975 0.10 +0.5 1,787,192 + AO356_07975 0.10 -0.5 1,787,193 - AO356_07975 0.10 +0.2 1,787,193 - AO356_07975 0.10 -0.1 1,787,193 - AO356_07975 0.10 -0.2 1,787,193 - AO356_07975 0.10 +0.8 1,787,193 - AO356_07975 0.10 +1.1 1,787,193 - AO356_07975 0.10 +0.2 1,787,193 - AO356_07975 0.10 +0.6 1,787,196 + AO356_07975 0.11 +0.2 1,787,196 + AO356_07975 0.11 +0.3 1,787,197 - AO356_07975 0.11 +1.3 1,787,418 + AO356_07975 0.25 +0.5 1,787,621 + AO356_07975 0.38 +0.0 1,787,621 + AO356_07975 0.38 +0.1 1,787,622 - AO356_07975 0.38 -0.4 1,787,775 + AO356_07975 0.48 -0.9 1,787,816 + AO356_07975 0.51 -0.1 1,787,816 + AO356_07975 0.51 +0.3 1,787,816 + AO356_07975 0.51 -0.0 1,787,816 + AO356_07975 0.51 -0.3 1,787,816 + AO356_07975 0.51 +0.2 1,787,816 + AO356_07975 0.51 -0.6 1,787,816 + AO356_07975 0.51 +0.3 1,787,816 + AO356_07975 0.51 -0.8 1,787,816 + AO356_07975 0.51 -1.5 1,788,214 + AO356_07975 0.76 -0.8 1,788,580 + -0.1 1,788,658 - -0.2 1,788,734 + AO356_07980 0.12 +1.8 1,788,734 + AO356_07980 0.12 +0.2 1,788,734 + AO356_07980 0.12 +0.7 1,788,734 + AO356_07980 0.12 -0.2 1,788,735 - AO356_07980 0.13 -0.7 1,788,735 - AO356_07980 0.13 +0.3 1,788,735 - AO356_07980 0.13 +0.5 1,788,735 - AO356_07980 0.13 +0.5 1,788,735 - AO356_07980 0.13 -0.6 1,788,836 + AO356_07980 0.22 +0.3 1,789,058 + AO356_07980 0.42 +1.4 1,789,058 + AO356_07980 0.42 +0.2 1,789,058 + AO356_07980 0.42 -0.1 1,789,058 + AO356_07980 0.42 -0.0 1,789,058 + AO356_07980 0.42 -0.5 1,789,058 + AO356_07980 0.42 -0.6 1,789,059 - AO356_07980 0.42 -1.7 1,789,059 - AO356_07980 0.42 +1.1 1,789,059 - AO356_07980 0.42 -0.1 1,789,202 + AO356_07980 0.55 +0.6 1,789,202 + AO356_07980 0.55 -0.3 1,789,203 - AO356_07980 0.55 +0.1 1,789,203 - AO356_07980 0.55 +0.9 1,789,203 - AO356_07980 0.55 +0.7 1,789,203 - AO356_07980 0.55 -0.4 1,789,440 - AO356_07980 0.76 -0.7 1,789,440 - AO356_07980 0.76 +1.0 1,789,450 + AO356_07980 0.77 +1.4 1,789,521 - AO356_07980 0.84 +1.0 1,789,521 - AO356_07980 0.84 -0.5 1,789,521 - AO356_07980 0.84 -1.2 1,789,521 - AO356_07980 0.84 +0.4 1,789,521 - AO356_07980 0.84 -0.3
Or see this region's nucleotide sequence