Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2370

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGa0059261_2368 and Ga0059261_2369 are separated by 83 nucleotidesGa0059261_2369 and Ga0059261_2370 are separated by 168 nucleotidesGa0059261_2370 and Ga0059261_2371 overlap by 4 nucleotidesGa0059261_2371 and Ga0059261_2372 overlap by 4 nucleotides Ga0059261_2368: Ga0059261_2368 - Phage baseplate assembly protein W, at 2,468,839 to 2,469,195 _2368 Ga0059261_2369: Ga0059261_2369 - phage baseplate assembly protein V, at 2,469,279 to 2,469,851 _2369 Ga0059261_2370: Ga0059261_2370 - hypothetical protein, at 2,470,020 to 2,470,409 _2370 Ga0059261_2371: Ga0059261_2371 - hypothetical protein, at 2,470,406 to 2,470,768 _2371 Ga0059261_2372: Ga0059261_2372 - Phage-related lysozyme (muraminidase), at 2,470,765 to 2,471,460 _2372 Position (kb) 2470 2471Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2469.089 kb on + strand, within Ga0059261_2368at 2469.089 kb on + strand, within Ga0059261_2368at 2469.089 kb on + strand, within Ga0059261_2368at 2469.153 kb on + strand, within Ga0059261_2368at 2469.153 kb on + strand, within Ga0059261_2368at 2469.242 kb on - strandat 2469.242 kb on - strandat 2469.268 kb on - strandat 2469.280 kb on + strandat 2469.362 kb on + strand, within Ga0059261_2369at 2469.508 kb on + strand, within Ga0059261_2369at 2469.508 kb on + strand, within Ga0059261_2369at 2469.508 kb on + strand, within Ga0059261_2369at 2469.508 kb on + strand, within Ga0059261_2369at 2469.508 kb on + strand, within Ga0059261_2369at 2469.508 kb on + strand, within Ga0059261_2369at 2469.508 kb on + strand, within Ga0059261_2369at 2469.509 kb on - strand, within Ga0059261_2369at 2469.509 kb on - strand, within Ga0059261_2369at 2469.548 kb on + strand, within Ga0059261_2369at 2469.594 kb on + strand, within Ga0059261_2369at 2469.594 kb on + strand, within Ga0059261_2369at 2469.594 kb on + strand, within Ga0059261_2369at 2469.595 kb on - strand, within Ga0059261_2369at 2469.595 kb on - strand, within Ga0059261_2369at 2469.595 kb on - strand, within Ga0059261_2369at 2469.595 kb on - strand, within Ga0059261_2369at 2469.833 kb on + strandat 2469.833 kb on + strandat 2469.833 kb on + strandat 2469.834 kb on - strandat 2469.834 kb on - strandat 2469.834 kb on - strandat 2469.889 kb on + strandat 2469.901 kb on - strandat 2469.963 kb on + strandat 2469.963 kb on + strandat 2469.963 kb on + strandat 2469.963 kb on + strandat 2469.963 kb on + strandat 2469.963 kb on + strandat 2469.963 kb on + strandat 2469.963 kb on + strandat 2469.963 kb on + strandat 2469.963 kb on + strandat 2469.963 kb on + strandat 2469.964 kb on - strandat 2469.964 kb on - strandat 2469.964 kb on - strandat 2469.964 kb on - strandat 2469.964 kb on - strandat 2469.964 kb on - strandat 2469.964 kb on - strandat 2469.964 kb on - strandat 2469.964 kb on - strandat 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.150 kb on + strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.151 kb on - strand, within Ga0059261_2370at 2470.175 kb on + strand, within Ga0059261_2370at 2470.176 kb on - strand, within Ga0059261_2370at 2470.176 kb on - strand, within Ga0059261_2370at 2470.374 kb on - strandat 2470.374 kb on - strandat 2470.374 kb on - strandat 2470.374 kb on - strandat 2470.544 kb on - strand, within Ga0059261_2371at 2470.665 kb on + strand, within Ga0059261_2371at 2470.665 kb on + strand, within Ga0059261_2371at 2470.665 kb on + strand, within Ga0059261_2371at 2470.666 kb on - strand, within Ga0059261_2371at 2470.666 kb on - strand, within Ga0059261_2371at 2470.666 kb on - strand, within Ga0059261_2371at 2470.666 kb on - strand, within Ga0059261_2371at 2470.835 kb on + strand, within Ga0059261_2372at 2470.835 kb on + strand, within Ga0059261_2372at 2470.835 kb on + strand, within Ga0059261_2372at 2470.835 kb on + strand, within Ga0059261_2372at 2470.836 kb on - strand, within Ga0059261_2372at 2470.836 kb on - strand, within Ga0059261_2372at 2470.856 kb on + strand, within Ga0059261_2372at 2470.856 kb on + strand, within Ga0059261_2372at 2470.856 kb on + strand, within Ga0059261_2372at 2471.002 kb on + strand, within Ga0059261_2372at 2471.002 kb on + strand, within Ga0059261_2372at 2471.002 kb on + strand, within Ga0059261_2372at 2471.002 kb on + strand, within Ga0059261_2372at 2471.002 kb on + strand, within Ga0059261_2372at 2471.003 kb on - strand, within Ga0059261_2372at 2471.003 kb on - strand, within Ga0059261_2372at 2471.003 kb on - strand, within Ga0059261_2372at 2471.036 kb on + strand, within Ga0059261_2372at 2471.036 kb on + strand, within Ga0059261_2372at 2471.036 kb on + strand, within Ga0059261_2372at 2471.036 kb on + strand, within Ga0059261_2372at 2471.036 kb on + strand, within Ga0059261_2372at 2471.036 kb on + strand, within Ga0059261_2372at 2471.036 kb on - strand, within Ga0059261_2372at 2471.037 kb on - strand, within Ga0059261_2372at 2471.037 kb on - strand, within Ga0059261_2372at 2471.037 kb on - strand, within Ga0059261_2372at 2471.037 kb on - strand, within Ga0059261_2372at 2471.037 kb on - strand, within Ga0059261_2372at 2471.037 kb on - strand, within Ga0059261_2372at 2471.081 kb on + strand, within Ga0059261_2372at 2471.081 kb on + strand, within Ga0059261_2372at 2471.081 kb on + strand, within Ga0059261_2372at 2471.112 kb on + strand, within Ga0059261_2372at 2471.112 kb on + strand, within Ga0059261_2372at 2471.112 kb on + strand, within Ga0059261_2372at 2471.112 kb on + strand, within Ga0059261_2372at 2471.112 kb on + strand, within Ga0059261_2372at 2471.112 kb on + strand, within Ga0059261_2372at 2471.113 kb on - strand, within Ga0059261_2372at 2471.113 kb on - strand, within Ga0059261_2372at 2471.113 kb on - strand, within Ga0059261_2372at 2471.113 kb on - strand, within Ga0059261_2372at 2471.114 kb on + strand, within Ga0059261_2372at 2471.114 kb on + strand, within Ga0059261_2372at 2471.114 kb on + strandat 2471.115 kb on - strandat 2471.115 kb on - strand, within Ga0059261_2372at 2471.115 kb on - strand, within Ga0059261_2372at 2471.115 kb on - strand, within Ga0059261_2372at 2471.115 kb on - strand, within Ga0059261_2372at 2471.115 kb on - strand, within Ga0059261_2372at 2471.115 kb on - strand, within Ga0059261_2372at 2471.136 kb on + strand, within Ga0059261_2372at 2471.136 kb on + strand, within Ga0059261_2372at 2471.136 kb on + strand, within Ga0059261_2372at 2471.136 kb on + strand, within Ga0059261_2372at 2471.136 kb on + strand, within Ga0059261_2372at 2471.137 kb on - strand, within Ga0059261_2372at 2471.137 kb on - strand, within Ga0059261_2372at 2471.137 kb on - strand, within Ga0059261_2372at 2471.137 kb on - strand, within Ga0059261_2372at 2471.137 kb on - strand, within Ga0059261_2372at 2471.137 kb on - strand, within Ga0059261_2372at 2471.137 kb on - strand, within Ga0059261_2372at 2471.138 kb on + strand, within Ga0059261_2372at 2471.138 kb on + strand, within Ga0059261_2372at 2471.138 kb on + strand, within Ga0059261_2372at 2471.138 kb on + strand, within Ga0059261_2372at 2471.138 kb on + strand, within Ga0059261_2372at 2471.138 kb on + strand, within Ga0059261_2372at 2471.139 kb on - strand, within Ga0059261_2372at 2471.139 kb on - strand, within Ga0059261_2372at 2471.139 kb on - strand, within Ga0059261_2372at 2471.139 kb on - strand, within Ga0059261_2372at 2471.139 kb on - strand, within Ga0059261_2372at 2471.139 kb on - strand, within Ga0059261_2372at 2471.139 kb on - strand, within Ga0059261_2372at 2471.139 kb on - strand, within Ga0059261_2372at 2471.139 kb on - strand, within Ga0059261_2372at 2471.139 kb on - strand, within Ga0059261_2372at 2471.180 kb on + strand, within Ga0059261_2372at 2471.181 kb on - strand, within Ga0059261_2372at 2471.303 kb on + strand, within Ga0059261_2372at 2471.303 kb on + strand, within Ga0059261_2372at 2471.304 kb on - strand, within Ga0059261_2372at 2471.304 kb on - strand, within Ga0059261_2372at 2471.304 kb on - strand, within Ga0059261_2372

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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2,469,089 + Ga0059261_2368 0.70 -0.8
2,469,089 + Ga0059261_2368 0.70 -0.4
2,469,089 + Ga0059261_2368 0.70 -0.8
2,469,153 + Ga0059261_2368 0.88 -1.0
2,469,153 + Ga0059261_2368 0.88 -2.4
2,469,242 - -0.3
2,469,242 - +0.3
2,469,268 - +1.8
2,469,280 + +0.1
2,469,362 + Ga0059261_2369 0.14 +0.0
2,469,508 + Ga0059261_2369 0.40 -0.5
2,469,508 + Ga0059261_2369 0.40 -1.6
2,469,508 + Ga0059261_2369 0.40 +0.1
2,469,508 + Ga0059261_2369 0.40 +0.8
2,469,508 + Ga0059261_2369 0.40 +0.2
2,469,508 + Ga0059261_2369 0.40 -0.1
2,469,508 + Ga0059261_2369 0.40 -0.6
2,469,509 - Ga0059261_2369 0.40 -1.0
2,469,509 - Ga0059261_2369 0.40 +0.1
2,469,548 + Ga0059261_2369 0.47 +0.5
2,469,594 + Ga0059261_2369 0.55 -0.2
2,469,594 + Ga0059261_2369 0.55 +1.3
2,469,594 + Ga0059261_2369 0.55 +1.0
2,469,595 - Ga0059261_2369 0.55 +0.4
2,469,595 - Ga0059261_2369 0.55 -1.3
2,469,595 - Ga0059261_2369 0.55 -0.7
2,469,595 - Ga0059261_2369 0.55 -0.7
2,469,833 + +0.4
2,469,833 + -0.0
2,469,833 + +0.2
2,469,834 - -0.2
2,469,834 - -0.3
2,469,834 - -1.0
2,469,889 + -0.6
2,469,901 - +0.2
2,469,963 + -1.2
2,469,963 + -0.9
2,469,963 + +0.8
2,469,963 + +3.8
2,469,963 + -1.2
2,469,963 + +0.6
2,469,963 + +0.2
2,469,963 + +1.9
2,469,963 + -1.7
2,469,963 + +0.3
2,469,963 + -0.2
2,469,964 - +0.8
2,469,964 - +0.4
2,469,964 - +0.6
2,469,964 - +2.8
2,469,964 - +0.6
2,469,964 - +1.0
2,469,964 - -0.4
2,469,964 - +0.0
2,469,964 - -0.2
2,470,150 + Ga0059261_2370 0.33 -0.3
2,470,150 + Ga0059261_2370 0.33 -2.8
2,470,150 + Ga0059261_2370 0.33 -1.3
2,470,150 + Ga0059261_2370 0.33 -0.1
2,470,150 + Ga0059261_2370 0.33 -0.2
2,470,150 + Ga0059261_2370 0.33 +0.2
2,470,150 + Ga0059261_2370 0.33 +0.2
2,470,150 + Ga0059261_2370 0.33 +0.4
2,470,150 + Ga0059261_2370 0.33 -0.2
2,470,150 + Ga0059261_2370 0.33 -0.6
2,470,150 + Ga0059261_2370 0.33 -0.3
2,470,150 + Ga0059261_2370 0.33 +0.1
2,470,150 + Ga0059261_2370 0.33 +1.0
2,470,150 + Ga0059261_2370 0.33 +1.2
2,470,151 - Ga0059261_2370 0.34 -0.8
2,470,151 - Ga0059261_2370 0.34 +0.4
2,470,151 - Ga0059261_2370 0.34 +0.5
2,470,151 - Ga0059261_2370 0.34 -0.5
2,470,151 - Ga0059261_2370 0.34 -0.1
2,470,151 - Ga0059261_2370 0.34 +0.6
2,470,151 - Ga0059261_2370 0.34 -0.6
2,470,151 - Ga0059261_2370 0.34 -0.0
2,470,151 - Ga0059261_2370 0.34 +1.5
2,470,151 - Ga0059261_2370 0.34 -0.1
2,470,151 - Ga0059261_2370 0.34 +0.2
2,470,151 - Ga0059261_2370 0.34 -0.0
2,470,151 - Ga0059261_2370 0.34 +0.3
2,470,151 - Ga0059261_2370 0.34 -0.2
2,470,151 - Ga0059261_2370 0.34 -0.3
2,470,151 - Ga0059261_2370 0.34 -0.1
2,470,151 - Ga0059261_2370 0.34 -0.8
2,470,151 - Ga0059261_2370 0.34 +0.5
2,470,151 - Ga0059261_2370 0.34 -1.2
2,470,151 - Ga0059261_2370 0.34 -0.1
2,470,151 - Ga0059261_2370 0.34 -0.2
2,470,175 + Ga0059261_2370 0.40 +0.3
2,470,176 - Ga0059261_2370 0.40 -0.6
2,470,176 - Ga0059261_2370 0.40 +1.2
2,470,374 - +0.3
2,470,374 - +0.8
2,470,374 - +0.3
2,470,374 - +1.3
2,470,544 - Ga0059261_2371 0.38 -0.2
2,470,665 + Ga0059261_2371 0.71 -0.0
2,470,665 + Ga0059261_2371 0.71 -0.7
2,470,665 + Ga0059261_2371 0.71 -0.3
2,470,666 - Ga0059261_2371 0.72 +0.4
2,470,666 - Ga0059261_2371 0.72 -0.1
2,470,666 - Ga0059261_2371 0.72 +0.7
2,470,666 - Ga0059261_2371 0.72 +0.1
2,470,835 + Ga0059261_2372 0.10 +0.5
2,470,835 + Ga0059261_2372 0.10 +0.8
2,470,835 + Ga0059261_2372 0.10 +1.1
2,470,835 + Ga0059261_2372 0.10 +0.8
2,470,836 - Ga0059261_2372 0.10 +0.4
2,470,836 - Ga0059261_2372 0.10 +0.5
2,470,856 + Ga0059261_2372 0.13 -0.6
2,470,856 + Ga0059261_2372 0.13 +0.9
2,470,856 + Ga0059261_2372 0.13 -1.0
2,471,002 + Ga0059261_2372 0.34 -0.3
2,471,002 + Ga0059261_2372 0.34 +0.1
2,471,002 + Ga0059261_2372 0.34 +1.0
2,471,002 + Ga0059261_2372 0.34 -0.6
2,471,002 + Ga0059261_2372 0.34 +0.6
2,471,003 - Ga0059261_2372 0.34 +1.1
2,471,003 - Ga0059261_2372 0.34 -2.6
2,471,003 - Ga0059261_2372 0.34 +0.5
2,471,036 + Ga0059261_2372 0.39 +1.1
2,471,036 + Ga0059261_2372 0.39 -0.0
2,471,036 + Ga0059261_2372 0.39 -0.8
2,471,036 + Ga0059261_2372 0.39 -0.4
2,471,036 + Ga0059261_2372 0.39 +0.6
2,471,036 + Ga0059261_2372 0.39 +0.7
2,471,036 - Ga0059261_2372 0.39 +0.4
2,471,037 - Ga0059261_2372 0.39 -0.3
2,471,037 - Ga0059261_2372 0.39 +1.8
2,471,037 - Ga0059261_2372 0.39 -0.5
2,471,037 - Ga0059261_2372 0.39 +0.1
2,471,037 - Ga0059261_2372 0.39 -0.5
2,471,037 - Ga0059261_2372 0.39 -1.1
2,471,081 + Ga0059261_2372 0.45 +0.2
2,471,081 + Ga0059261_2372 0.45 +1.8
2,471,081 + Ga0059261_2372 0.45 -0.1
2,471,112 + Ga0059261_2372 0.50 +0.8
2,471,112 + Ga0059261_2372 0.50 -0.2
2,471,112 + Ga0059261_2372 0.50 +0.8
2,471,112 + Ga0059261_2372 0.50 -0.2
2,471,112 + Ga0059261_2372 0.50 +0.2
2,471,112 + Ga0059261_2372 0.50 -0.7
2,471,113 - Ga0059261_2372 0.50 +0.2
2,471,113 - Ga0059261_2372 0.50 -0.3
2,471,113 - Ga0059261_2372 0.50 -0.5
2,471,113 - Ga0059261_2372 0.50 +1.1
2,471,114 + Ga0059261_2372 0.50 -0.2
2,471,114 + Ga0059261_2372 0.50 -1.1
2,471,114 + +0.2
2,471,115 - +0.8
2,471,115 - Ga0059261_2372 0.50 -0.6
2,471,115 - Ga0059261_2372 0.50 +1.3
2,471,115 - Ga0059261_2372 0.50 +0.8
2,471,115 - Ga0059261_2372 0.50 +0.2
2,471,115 - Ga0059261_2372 0.50 +1.6
2,471,115 - Ga0059261_2372 0.50 -0.5
2,471,136 + Ga0059261_2372 0.53 +0.2
2,471,136 + Ga0059261_2372 0.53 -0.3
2,471,136 + Ga0059261_2372 0.53 +0.1
2,471,136 + Ga0059261_2372 0.53 +1.0
2,471,136 + Ga0059261_2372 0.53 +1.5
2,471,137 - Ga0059261_2372 0.53 -0.5
2,471,137 - Ga0059261_2372 0.53 -1.2
2,471,137 - Ga0059261_2372 0.53 -0.3
2,471,137 - Ga0059261_2372 0.53 -1.0
2,471,137 - Ga0059261_2372 0.53 -0.9
2,471,137 - Ga0059261_2372 0.53 +0.7
2,471,137 - Ga0059261_2372 0.53 -0.5
2,471,138 + Ga0059261_2372 0.54 +1.1
2,471,138 + Ga0059261_2372 0.54 -0.4
2,471,138 + Ga0059261_2372 0.54 +1.2
2,471,138 + Ga0059261_2372 0.54 -0.7
2,471,138 + Ga0059261_2372 0.54 -0.8
2,471,138 + Ga0059261_2372 0.54 -1.4
2,471,139 - Ga0059261_2372 0.54 +0.3
2,471,139 - Ga0059261_2372 0.54 +0.2
2,471,139 - Ga0059261_2372 0.54 +0.5
2,471,139 - Ga0059261_2372 0.54 -0.1
2,471,139 - Ga0059261_2372 0.54 +0.1
2,471,139 - Ga0059261_2372 0.54 +0.1
2,471,139 - Ga0059261_2372 0.54 +1.1
2,471,139 - Ga0059261_2372 0.54 +0.3
2,471,139 - Ga0059261_2372 0.54 +0.1
2,471,139 - Ga0059261_2372 0.54 +0.8
2,471,180 + Ga0059261_2372 0.60 +1.8
2,471,181 - Ga0059261_2372 0.60 +0.2
2,471,303 + Ga0059261_2372 0.77 +0.2
2,471,303 + Ga0059261_2372 0.77 +0.3
2,471,304 - Ga0059261_2372 0.77 +0.8
2,471,304 - Ga0059261_2372 0.77 -0.6
2,471,304 - Ga0059261_2372 0.77 +0.1

Or see this region's nucleotide sequence