Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1361

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGa0059261_1360 and Ga0059261_1361 are separated by 161 nucleotidesGa0059261_1361 and Ga0059261_1362 are separated by 4 nucleotides Ga0059261_1360: Ga0059261_1360 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 1,432,348 to 1,433,406 _1360 Ga0059261_1361: Ga0059261_1361 - sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase, at 1,433,568 to 1,434,956 _1361 Ga0059261_1362: Ga0059261_1362 - putative PEP-CTERM system histidine kinase, at 1,434,961 to 1,436,994 _1362 Position (kb) 1433 1434 1435Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1432.649 kb on + strand, within Ga0059261_1360at 1432.649 kb on + strand, within Ga0059261_1360at 1432.650 kb on - strand, within Ga0059261_1360at 1432.650 kb on - strand, within Ga0059261_1360at 1432.755 kb on + strand, within Ga0059261_1360at 1432.756 kb on - strand, within Ga0059261_1360at 1432.787 kb on + strand, within Ga0059261_1360at 1432.787 kb on + strand, within Ga0059261_1360at 1432.788 kb on - strand, within Ga0059261_1360at 1432.788 kb on - strand, within Ga0059261_1360at 1432.788 kb on - strand, within Ga0059261_1360at 1432.896 kb on + strand, within Ga0059261_1360at 1432.896 kb on + strand, within Ga0059261_1360at 1432.896 kb on + strand, within Ga0059261_1360at 1432.896 kb on + strand, within Ga0059261_1360at 1432.896 kb on + strandat 1432.897 kb on - strand, within Ga0059261_1360at 1432.897 kb on - strand, within Ga0059261_1360at 1432.897 kb on - strand, within Ga0059261_1360at 1432.897 kb on - strand, within Ga0059261_1360at 1432.897 kb on - strand, within Ga0059261_1360at 1432.897 kb on - strand, within Ga0059261_1360at 1432.897 kb on - strand, within Ga0059261_1360at 1432.897 kb on - strand, within Ga0059261_1360at 1432.932 kb on + strand, within Ga0059261_1360at 1432.932 kb on + strand, within Ga0059261_1360at 1432.932 kb on + strand, within Ga0059261_1360at 1432.932 kb on + strand, within Ga0059261_1360at 1432.932 kb on + strand, within Ga0059261_1360at 1432.933 kb on - strand, within Ga0059261_1360at 1432.934 kb on + strand, within Ga0059261_1360at 1432.934 kb on + strand, within Ga0059261_1360at 1432.934 kb on + strandat 1432.934 kb on + strand, within Ga0059261_1360at 1432.935 kb on - strand, within Ga0059261_1360at 1432.935 kb on - strand, within Ga0059261_1360at 1432.935 kb on - strand, within Ga0059261_1360at 1432.935 kb on - strand, within Ga0059261_1360at 1432.935 kb on - strand, within Ga0059261_1360at 1432.935 kb on - strand, within Ga0059261_1360at 1432.935 kb on - strand, within Ga0059261_1360at 1432.935 kb on - strand, within Ga0059261_1360at 1432.935 kb on - strand, within Ga0059261_1360at 1432.940 kb on + strand, within Ga0059261_1360at 1432.940 kb on + strand, within Ga0059261_1360at 1432.941 kb on - strand, within Ga0059261_1360at 1432.941 kb on - strandat 1432.982 kb on - strand, within Ga0059261_1360at 1433.203 kb on - strand, within Ga0059261_1360at 1433.431 kb on - strandat 1433.460 kb on + strandat 1433.460 kb on + strandat 1433.460 kb on + strandat 1433.461 kb on - strandat 1433.461 kb on - strandat 1433.520 kb on + strandat 1433.520 kb on + strandat 1433.521 kb on - strandat 1433.521 kb on - strandat 1433.521 kb on - strandat 1433.552 kb on + strandat 1433.552 kb on + strandat 1433.567 kb on + strandat 1433.567 kb on + strandat 1433.567 kb on + strandat 1433.587 kb on + strandat 1433.589 kb on + strandat 1433.589 kb on + strandat 1433.589 kb on + strandat 1433.589 kb on + strandat 1433.589 kb on + strandat 1433.589 kb on + strandat 1433.590 kb on - strandat 1433.590 kb on - strandat 1433.590 kb on - strandat 1433.590 kb on - strandat 1433.590 kb on - strandat 1433.590 kb on - strandat 1433.590 kb on - strandat 1433.590 kb on - strandat 1433.590 kb on - strandat 1433.590 kb on - strandat 1433.591 kb on + strandat 1433.592 kb on - strandat 1433.667 kb on + strandat 1433.667 kb on + strandat 1433.668 kb on - strandat 1433.668 kb on - strandat 1433.715 kb on - strand, within Ga0059261_1361at 1433.715 kb on - strand, within Ga0059261_1361at 1433.775 kb on + strand, within Ga0059261_1361at 1433.776 kb on - strand, within Ga0059261_1361at 1433.910 kb on + strand, within Ga0059261_1361at 1433.910 kb on + strand, within Ga0059261_1361at 1433.910 kb on + strand, within Ga0059261_1361at 1433.911 kb on - strand, within Ga0059261_1361at 1434.081 kb on + strand, within Ga0059261_1361at 1434.081 kb on + strand, within Ga0059261_1361at 1434.081 kb on + strand, within Ga0059261_1361at 1434.082 kb on - strand, within Ga0059261_1361at 1434.141 kb on + strand, within Ga0059261_1361at 1434.141 kb on + strand, within Ga0059261_1361at 1434.141 kb on + strand, within Ga0059261_1361at 1434.141 kb on + strand, within Ga0059261_1361at 1434.141 kb on + strand, within Ga0059261_1361at 1434.141 kb on + strand, within Ga0059261_1361at 1434.141 kb on + strand, within Ga0059261_1361at 1434.141 kb on + strand, within Ga0059261_1361at 1434.141 kb on + strand, within Ga0059261_1361at 1434.141 kb on + strand, within Ga0059261_1361at 1434.141 kb on + strand, within Ga0059261_1361at 1434.142 kb on - strand, within Ga0059261_1361at 1434.142 kb on - strand, within Ga0059261_1361at 1434.142 kb on - strand, within Ga0059261_1361at 1434.142 kb on - strand, within Ga0059261_1361at 1434.142 kb on - strand, within Ga0059261_1361at 1434.142 kb on - strand, within Ga0059261_1361at 1434.142 kb on - strand, within Ga0059261_1361at 1434.142 kb on - strand, within Ga0059261_1361at 1434.311 kb on + strand, within Ga0059261_1361at 1434.434 kb on - strand, within Ga0059261_1361at 1434.434 kb on - strand, within Ga0059261_1361at 1434.492 kb on + strand, within Ga0059261_1361at 1434.492 kb on + strand, within Ga0059261_1361at 1434.492 kb on + strand, within Ga0059261_1361at 1434.492 kb on + strand, within Ga0059261_1361at 1434.516 kb on + strand, within Ga0059261_1361at 1434.516 kb on + strand, within Ga0059261_1361at 1434.756 kb on + strand, within Ga0059261_1361at 1434.756 kb on + strand, within Ga0059261_1361at 1434.757 kb on - strand, within Ga0059261_1361at 1434.757 kb on - strand, within Ga0059261_1361at 1434.757 kb on - strand, within Ga0059261_1361at 1434.757 kb on - strand, within Ga0059261_1361at 1434.757 kb on - strand, within Ga0059261_1361at 1434.757 kb on - strand, within Ga0059261_1361at 1434.759 kb on + strand, within Ga0059261_1361at 1434.760 kb on - strand, within Ga0059261_1361at 1434.760 kb on - strand, within Ga0059261_1361at 1434.760 kb on - strand, within Ga0059261_1361at 1434.760 kb on - strand, within Ga0059261_1361at 1434.813 kb on + strand, within Ga0059261_1361at 1434.813 kb on + strand, within Ga0059261_1361at 1434.813 kb on + strand, within Ga0059261_1361at 1434.813 kb on + strand, within Ga0059261_1361at 1434.813 kb on + strand, within Ga0059261_1361at 1434.814 kb on - strand, within Ga0059261_1361at 1434.814 kb on - strand, within Ga0059261_1361at 1434.814 kb on - strand, within Ga0059261_1361at 1434.814 kb on - strand, within Ga0059261_1361at 1434.814 kb on - strand, within Ga0059261_1361at 1434.814 kb on - strand, within Ga0059261_1361at 1434.814 kb on - strand, within Ga0059261_1361at 1434.814 kb on - strand, within Ga0059261_1361at 1434.814 kb on - strand, within Ga0059261_1361at 1434.814 kb on - strandat 1434.814 kb on - strand, within Ga0059261_1361at 1434.819 kb on + strandat 1434.819 kb on + strandat 1434.820 kb on - strandat 1434.820 kb on - strandat 1434.820 kb on - strandat 1434.858 kb on + strandat 1434.859 kb on - strandat 1434.859 kb on - strandat 1434.859 kb on - strandat 1434.867 kb on + strandat 1434.867 kb on + strandat 1434.867 kb on + strandat 1434.867 kb on + strandat 1434.868 kb on - strandat 1434.868 kb on - strandat 1434.868 kb on - strandat 1434.868 kb on - strandat 1434.868 kb on - strandat 1434.871 kb on - strandat 1434.882 kb on + strandat 1434.882 kb on + strandat 1434.882 kb on + strandat 1434.882 kb on + strandat 1434.882 kb on + strandat 1434.882 kb on + strandat 1434.882 kb on + strandat 1434.883 kb on - strandat 1434.883 kb on - strandat 1435.246 kb on + strand, within Ga0059261_1362at 1435.246 kb on + strand, within Ga0059261_1362at 1435.246 kb on + strand, within Ga0059261_1362at 1435.246 kb on + strand, within Ga0059261_1362at 1435.246 kb on + strand, within Ga0059261_1362at 1435.246 kb on + strand, within Ga0059261_1362at 1435.246 kb on - strand, within Ga0059261_1362at 1435.247 kb on - strand, within Ga0059261_1362at 1435.247 kb on - strand, within Ga0059261_1362at 1435.247 kb on - strand, within Ga0059261_1362at 1435.247 kb on - strand, within Ga0059261_1362at 1435.247 kb on - strand, within Ga0059261_1362at 1435.247 kb on - strand, within Ga0059261_1362at 1435.247 kb on - strand, within Ga0059261_1362at 1435.457 kb on + strandat 1435.458 kb on - strand, within Ga0059261_1362at 1435.529 kb on + strand, within Ga0059261_1362at 1435.624 kb on + strand, within Ga0059261_1362at 1435.624 kb on + strand, within Ga0059261_1362at 1435.624 kb on + strand, within Ga0059261_1362at 1435.625 kb on - strand, within Ga0059261_1362at 1435.625 kb on - strand, within Ga0059261_1362at 1435.625 kb on - strand, within Ga0059261_1362at 1435.625 kb on - strand, within Ga0059261_1362at 1435.625 kb on - strand, within Ga0059261_1362at 1435.625 kb on - strand, within Ga0059261_1362at 1435.657 kb on + strand, within Ga0059261_1362at 1435.657 kb on + strand, within Ga0059261_1362at 1435.658 kb on - strand, within Ga0059261_1362at 1435.773 kb on - strand, within Ga0059261_1362at 1435.838 kb on - strand, within Ga0059261_1362at 1435.838 kb on - strand, within Ga0059261_1362at 1435.843 kb on + strandat 1435.843 kb on + strand, within Ga0059261_1362at 1435.844 kb on - strand, within Ga0059261_1362at 1435.915 kb on - strand, within Ga0059261_1362

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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1,432,649 + Ga0059261_1360 0.28 -3.6
1,432,649 + Ga0059261_1360 0.28 -2.4
1,432,650 - Ga0059261_1360 0.29 -2.6
1,432,650 - Ga0059261_1360 0.29 -2.3
1,432,755 + Ga0059261_1360 0.38 -2.8
1,432,756 - Ga0059261_1360 0.39 -2.4
1,432,787 + Ga0059261_1360 0.41 -4.2
1,432,787 + Ga0059261_1360 0.41 -2.3
1,432,788 - Ga0059261_1360 0.42 -0.3
1,432,788 - Ga0059261_1360 0.42 -3.7
1,432,788 - Ga0059261_1360 0.42 -0.3
1,432,896 + Ga0059261_1360 0.52 -2.0
1,432,896 + Ga0059261_1360 0.52 -2.8
1,432,896 + Ga0059261_1360 0.52 -2.5
1,432,896 + Ga0059261_1360 0.52 -0.3
1,432,896 + +0.7
1,432,897 - Ga0059261_1360 0.52 -2.3
1,432,897 - Ga0059261_1360 0.52 -3.6
1,432,897 - Ga0059261_1360 0.52 -2.8
1,432,897 - Ga0059261_1360 0.52 -3.9
1,432,897 - Ga0059261_1360 0.52 -1.1
1,432,897 - Ga0059261_1360 0.52 +0.1
1,432,897 - Ga0059261_1360 0.52 -2.1
1,432,897 - Ga0059261_1360 0.52 -1.3
1,432,932 + Ga0059261_1360 0.55 -2.4
1,432,932 + Ga0059261_1360 0.55 -2.7
1,432,932 + Ga0059261_1360 0.55 -2.2
1,432,932 + Ga0059261_1360 0.55 -1.8
1,432,932 + Ga0059261_1360 0.55 -1.5
1,432,933 - Ga0059261_1360 0.55 -0.3
1,432,934 + Ga0059261_1360 0.55 -2.5
1,432,934 + Ga0059261_1360 0.55 -2.7
1,432,934 + +0.7
1,432,934 + Ga0059261_1360 0.55 -3.0
1,432,935 - Ga0059261_1360 0.55 -1.1
1,432,935 - Ga0059261_1360 0.55 -3.0
1,432,935 - Ga0059261_1360 0.55 -2.2
1,432,935 - Ga0059261_1360 0.55 -3.6
1,432,935 - Ga0059261_1360 0.55 -2.4
1,432,935 - Ga0059261_1360 0.55 -3.4
1,432,935 - Ga0059261_1360 0.55 -1.5
1,432,935 - Ga0059261_1360 0.55 -3.6
1,432,935 - Ga0059261_1360 0.55 -1.5
1,432,940 + Ga0059261_1360 0.56 -0.4
1,432,940 + Ga0059261_1360 0.56 -3.0
1,432,941 - Ga0059261_1360 0.56 -2.8
1,432,941 - +0.1
1,432,982 - Ga0059261_1360 0.60 -3.6
1,433,203 - Ga0059261_1360 0.81 -0.3
1,433,431 - -0.9
1,433,460 + -2.2
1,433,460 + -0.6
1,433,460 + -1.1
1,433,461 - -1.1
1,433,461 - -1.1
1,433,520 + -2.5
1,433,520 + -1.0
1,433,521 - -0.5
1,433,521 - -0.3
1,433,521 - +1.1
1,433,552 + -1.3
1,433,552 + -0.2
1,433,567 + -0.6
1,433,567 + -0.3
1,433,567 + -1.4
1,433,587 + -0.2
1,433,589 + +0.1
1,433,589 + -0.2
1,433,589 + -0.5
1,433,589 + +0.9
1,433,589 + -0.3
1,433,589 + +0.7
1,433,590 - -1.6
1,433,590 - -1.1
1,433,590 - -0.9
1,433,590 - -1.1
1,433,590 - -0.1
1,433,590 - -0.3
1,433,590 - +0.2
1,433,590 - +0.4
1,433,590 - -2.5
1,433,590 - +0.4
1,433,591 + +1.0
1,433,592 - -0.7
1,433,667 + -0.3
1,433,667 + +0.5
1,433,668 - -0.7
1,433,668 - -0.4
1,433,715 - Ga0059261_1361 0.11 -1.3
1,433,715 - Ga0059261_1361 0.11 -1.8
1,433,775 + Ga0059261_1361 0.15 -1.1
1,433,776 - Ga0059261_1361 0.15 -0.2
1,433,910 + Ga0059261_1361 0.25 -0.0
1,433,910 + Ga0059261_1361 0.25 +1.1
1,433,910 + Ga0059261_1361 0.25 -0.6
1,433,911 - Ga0059261_1361 0.25 -1.2
1,434,081 + Ga0059261_1361 0.37 -0.9
1,434,081 + Ga0059261_1361 0.37 +1.3
1,434,081 + Ga0059261_1361 0.37 +0.7
1,434,082 - Ga0059261_1361 0.37 -0.4
1,434,141 + Ga0059261_1361 0.41 +0.4
1,434,141 + Ga0059261_1361 0.41 -0.6
1,434,141 + Ga0059261_1361 0.41 -3.2
1,434,141 + Ga0059261_1361 0.41 +0.4
1,434,141 + Ga0059261_1361 0.41 -1.0
1,434,141 + Ga0059261_1361 0.41 -0.4
1,434,141 + Ga0059261_1361 0.41 -0.8
1,434,141 + Ga0059261_1361 0.41 -1.1
1,434,141 + Ga0059261_1361 0.41 -0.4
1,434,141 + Ga0059261_1361 0.41 -0.2
1,434,141 + Ga0059261_1361 0.41 +0.3
1,434,142 - Ga0059261_1361 0.41 -0.8
1,434,142 - Ga0059261_1361 0.41 -2.8
1,434,142 - Ga0059261_1361 0.41 -0.7
1,434,142 - Ga0059261_1361 0.41 -2.0
1,434,142 - Ga0059261_1361 0.41 -0.1
1,434,142 - Ga0059261_1361 0.41 +0.7
1,434,142 - Ga0059261_1361 0.41 -0.5
1,434,142 - Ga0059261_1361 0.41 -0.4
1,434,311 + Ga0059261_1361 0.53 +0.3
1,434,434 - Ga0059261_1361 0.62 -1.4
1,434,434 - Ga0059261_1361 0.62 -0.1
1,434,492 + Ga0059261_1361 0.67 -2.2
1,434,492 + Ga0059261_1361 0.67 +0.9
1,434,492 + Ga0059261_1361 0.67 +0.9
1,434,492 + Ga0059261_1361 0.67 -1.6
1,434,516 + Ga0059261_1361 0.68 -0.1
1,434,516 + Ga0059261_1361 0.68 -0.6
1,434,756 + Ga0059261_1361 0.86 +0.2
1,434,756 + Ga0059261_1361 0.86 +0.1
1,434,757 - Ga0059261_1361 0.86 -0.7
1,434,757 - Ga0059261_1361 0.86 -2.1
1,434,757 - Ga0059261_1361 0.86 -1.2
1,434,757 - Ga0059261_1361 0.86 +1.5
1,434,757 - Ga0059261_1361 0.86 -1.9
1,434,757 - Ga0059261_1361 0.86 -1.5
1,434,759 + Ga0059261_1361 0.86 +0.3
1,434,760 - Ga0059261_1361 0.86 +0.7
1,434,760 - Ga0059261_1361 0.86 -0.6
1,434,760 - Ga0059261_1361 0.86 -0.4
1,434,760 - Ga0059261_1361 0.86 -0.5
1,434,813 + Ga0059261_1361 0.90 +0.2
1,434,813 + Ga0059261_1361 0.90 -0.0
1,434,813 + Ga0059261_1361 0.90 +0.5
1,434,813 + Ga0059261_1361 0.90 +0.4
1,434,813 + Ga0059261_1361 0.90 -1.3
1,434,814 - Ga0059261_1361 0.90 -1.0
1,434,814 - Ga0059261_1361 0.90 +0.1
1,434,814 - Ga0059261_1361 0.90 -1.0
1,434,814 - Ga0059261_1361 0.90 -1.3
1,434,814 - Ga0059261_1361 0.90 -0.3
1,434,814 - Ga0059261_1361 0.90 -0.4
1,434,814 - Ga0059261_1361 0.90 -0.3
1,434,814 - Ga0059261_1361 0.90 -0.8
1,434,814 - Ga0059261_1361 0.90 -0.4
1,434,814 - +0.7
1,434,814 - Ga0059261_1361 0.90 -1.7
1,434,819 + +0.5
1,434,819 + +0.4
1,434,820 - -1.3
1,434,820 - +0.1
1,434,820 - -0.4
1,434,858 + +1.5
1,434,859 - -0.7
1,434,859 - -0.3
1,434,859 - +0.2
1,434,867 + +0.2
1,434,867 + -0.1
1,434,867 + +1.5
1,434,867 + -0.2
1,434,868 - -0.9
1,434,868 - -0.5
1,434,868 - -1.5
1,434,868 - -1.1
1,434,868 - +0.3
1,434,871 - -1.5
1,434,882 + +0.2
1,434,882 + -0.5
1,434,882 + +0.7
1,434,882 + -0.2
1,434,882 + +0.5
1,434,882 + +0.2
1,434,882 + -0.5
1,434,883 - -2.1
1,434,883 - -1.5
1,435,246 + Ga0059261_1362 0.14 -0.4
1,435,246 + Ga0059261_1362 0.14 +0.9
1,435,246 + Ga0059261_1362 0.14 -2.1
1,435,246 + Ga0059261_1362 0.14 -0.6
1,435,246 + Ga0059261_1362 0.14 +0.4
1,435,246 + Ga0059261_1362 0.14 +1.7
1,435,246 - Ga0059261_1362 0.14 -0.5
1,435,247 - Ga0059261_1362 0.14 -1.2
1,435,247 - Ga0059261_1362 0.14 -0.4
1,435,247 - Ga0059261_1362 0.14 -0.1
1,435,247 - Ga0059261_1362 0.14 -0.3
1,435,247 - Ga0059261_1362 0.14 -0.8
1,435,247 - Ga0059261_1362 0.14 -0.5
1,435,247 - Ga0059261_1362 0.14 -0.5
1,435,457 + +0.7
1,435,458 - Ga0059261_1362 0.24 +0.4
1,435,529 + Ga0059261_1362 0.28 -0.7
1,435,624 + Ga0059261_1362 0.33 -0.2
1,435,624 + Ga0059261_1362 0.33 -0.4
1,435,624 + Ga0059261_1362 0.33 +0.5
1,435,625 - Ga0059261_1362 0.33 -1.0
1,435,625 - Ga0059261_1362 0.33 -1.0
1,435,625 - Ga0059261_1362 0.33 -0.2
1,435,625 - Ga0059261_1362 0.33 -0.7
1,435,625 - Ga0059261_1362 0.33 -0.2
1,435,625 - Ga0059261_1362 0.33 -2.2
1,435,657 + Ga0059261_1362 0.34 -0.9
1,435,657 + Ga0059261_1362 0.34 -0.8
1,435,658 - Ga0059261_1362 0.34 -1.3
1,435,773 - Ga0059261_1362 0.40 -1.2
1,435,838 - Ga0059261_1362 0.43 -0.9
1,435,838 - Ga0059261_1362 0.43 -0.7
1,435,843 + +0.1
1,435,843 + Ga0059261_1362 0.43 -1.9
1,435,844 - Ga0059261_1362 0.43 -0.6
1,435,915 - Ga0059261_1362 0.47 -1.0

Or see this region's nucleotide sequence