Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19090 and AO356_19095 are separated by 120 nucleotides AO356_19095 and AO356_19100 are separated by 52 nucleotides AO356_19100 and AO356_19105 are separated by 32 nucleotides
AO356_19090: AO356_19090 - phosphoribosylaminoimidazole synthetase, at 4,289,208 to 4,290,266
_19090
AO356_19095: AO356_19095 - hypothetical protein, at 4,290,387 to 4,290,578
_19095
AO356_19100: AO356_19100 - hypothetical protein, at 4,290,631 to 4,291,689
_19100
AO356_19105: AO356_19105 - hypothetical protein, at 4,291,722 to 4,292,795
_19105
Position (kb)
4290
4291
4292 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4289.821 kb on + strand, within AO356_19090 at 4289.821 kb on + strand, within AO356_19090 at 4289.822 kb on - strand, within AO356_19090 at 4289.822 kb on - strand, within AO356_19090 at 4289.944 kb on + strand, within AO356_19090 at 4289.944 kb on + strand, within AO356_19090 at 4290.332 kb on + strand at 4290.434 kb on + strand, within AO356_19095 at 4290.434 kb on + strand, within AO356_19095 at 4290.434 kb on + strand, within AO356_19095 at 4290.434 kb on + strand, within AO356_19095 at 4290.435 kb on - strand, within AO356_19095 at 4290.435 kb on - strand, within AO356_19095 at 4290.435 kb on - strand, within AO356_19095 at 4290.455 kb on - strand, within AO356_19095 at 4290.461 kb on + strand, within AO356_19095 at 4290.461 kb on + strand, within AO356_19095 at 4290.461 kb on + strand, within AO356_19095 at 4290.461 kb on + strand, within AO356_19095 at 4290.462 kb on - strand, within AO356_19095 at 4290.462 kb on - strand, within AO356_19095 at 4290.463 kb on + strand, within AO356_19095 at 4290.463 kb on + strand, within AO356_19095 at 4290.463 kb on + strand, within AO356_19095 at 4290.464 kb on - strand, within AO356_19095 at 4290.464 kb on - strand, within AO356_19095 at 4290.464 kb on - strand, within AO356_19095 at 4290.464 kb on - strand, within AO356_19095 at 4290.469 kb on + strand, within AO356_19095 at 4290.469 kb on + strand, within AO356_19095 at 4290.487 kb on + strand, within AO356_19095 at 4290.487 kb on + strand, within AO356_19095 at 4290.487 kb on + strand, within AO356_19095 at 4290.487 kb on + strand, within AO356_19095 at 4290.487 kb on + strand, within AO356_19095 at 4290.487 kb on + strand, within AO356_19095 at 4290.487 kb on + strand, within AO356_19095 at 4290.487 kb on + strand, within AO356_19095 at 4290.488 kb on - strand, within AO356_19095 at 4290.488 kb on - strand, within AO356_19095 at 4290.488 kb on - strand, within AO356_19095 at 4290.488 kb on - strand, within AO356_19095 at 4290.488 kb on - strand, within AO356_19095 at 4290.488 kb on - strand, within AO356_19095 at 4290.488 kb on - strand, within AO356_19095 at 4290.488 kb on - strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.489 kb on + strand, within AO356_19095 at 4290.490 kb on - strand, within AO356_19095 at 4290.490 kb on - strand, within AO356_19095 at 4290.490 kb on - strand, within AO356_19095 at 4290.490 kb on - strand, within AO356_19095 at 4290.490 kb on - strand, within AO356_19095 at 4290.490 kb on - strand, within AO356_19095 at 4290.490 kb on - strand, within AO356_19095 at 4290.497 kb on - strand, within AO356_19095 at 4290.712 kb on + strand at 4290.712 kb on + strand at 4290.712 kb on + strand at 4290.713 kb on - strand at 4290.783 kb on + strand, within AO356_19100 at 4290.783 kb on + strand, within AO356_19100 at 4290.877 kb on + strand, within AO356_19100 at 4290.877 kb on + strand, within AO356_19100 at 4290.878 kb on - strand, within AO356_19100 at 4290.933 kb on + strand, within AO356_19100 at 4291.257 kb on + strand, within AO356_19100 at 4291.257 kb on + strand, within AO356_19100 at 4291.257 kb on + strand, within AO356_19100 at 4291.257 kb on + strand, within AO356_19100 at 4291.257 kb on + strand, within AO356_19100 at 4291.258 kb on - strand, within AO356_19100 at 4291.258 kb on - strand, within AO356_19100 at 4291.687 kb on + strand at 4291.687 kb on + strand at 4291.688 kb on - strand at 4291.702 kb on + strand at 4291.702 kb on + strand at 4291.702 kb on + strand at 4291.702 kb on + strand at 4291.703 kb on - strand at 4291.703 kb on - strand at 4291.703 kb on - strand at 4291.703 kb on - strand at 4291.703 kb on - strand at 4291.704 kb on + strand at 4291.704 kb on + strand at 4291.704 kb on + strand at 4291.704 kb on + strand at 4291.704 kb on + strand at 4291.704 kb on + strand at 4291.704 kb on + strand at 4291.704 kb on + strand at 4291.705 kb on - strand at 4291.705 kb on - strand at 4291.705 kb on - strand at 4291.706 kb on + strand at 4291.706 kb on + strand at 4291.706 kb on + strand at 4291.706 kb on + strand at 4291.706 kb on + strand at 4291.706 kb on + strand at 4291.706 kb on + strand at 4291.706 kb on + strand at 4291.706 kb on + strand at 4291.707 kb on - strand at 4291.707 kb on - strand at 4291.707 kb on - strand at 4291.707 kb on - strand at 4291.707 kb on - strand at 4291.707 kb on - strand at 4291.707 kb on - strand at 4291.710 kb on + strand at 4291.710 kb on + strand at 4291.710 kb on + strand at 4291.710 kb on + strand at 4291.710 kb on + strand at 4291.710 kb on + strand at 4291.710 kb on + strand at 4291.711 kb on - strand at 4291.711 kb on - strand at 4291.711 kb on - strand at 4291.711 kb on - strand at 4291.711 kb on - strand at 4291.711 kb on - strand at 4291.778 kb on + strand at 4291.778 kb on + strand at 4291.778 kb on + strand at 4291.779 kb on - strand at 4291.779 kb on - strand at 4291.779 kb on - strand at 4291.779 kb on - strand at 4291.779 kb on - strand at 4291.782 kb on + strand at 4291.782 kb on + strand at 4291.782 kb on + strand at 4291.783 kb on - strand at 4291.783 kb on - strand at 4291.783 kb on - strand at 4291.833 kb on + strand, within AO356_19105 at 4291.833 kb on + strand, within AO356_19105 at 4291.834 kb on - strand, within AO356_19105 at 4291.834 kb on - strand, within AO356_19105 at 4291.834 kb on - strand, within AO356_19105 at 4291.834 kb on - strand, within AO356_19105 at 4291.940 kb on - strand, within AO356_19105 at 4291.940 kb on - strand, within AO356_19105 at 4291.940 kb on - strand, within AO356_19105 at 4291.940 kb on - strand, within AO356_19105 at 4291.984 kb on - strand, within AO356_19105 at 4292.220 kb on + strand, within AO356_19105 at 4292.220 kb on + strand, within AO356_19105 at 4292.220 kb on + strand, within AO356_19105 at 4292.220 kb on + strand, within AO356_19105 at 4292.221 kb on - strand, within AO356_19105 at 4292.221 kb on - strand, within AO356_19105 at 4292.356 kb on + strand, within AO356_19105 at 4292.379 kb on + strand, within AO356_19105 at 4292.380 kb on - strand, within AO356_19105 at 4292.460 kb on + strand, within AO356_19105 at 4292.460 kb on + strand, within AO356_19105 at 4292.460 kb on + strand, within AO356_19105 at 4292.461 kb on - strand, within AO356_19105 at 4292.461 kb on - strand, within AO356_19105 at 4292.461 kb on - strand, within AO356_19105 at 4292.461 kb on - strand, within AO356_19105 at 4292.461 kb on - strand, within AO356_19105 at 4292.461 kb on - strand, within AO356_19105 at 4292.461 kb on - strand, within AO356_19105 at 4292.461 kb on - strand, within AO356_19105 at 4292.461 kb on - strand, within AO356_19105 at 4292.461 kb on - strand, within AO356_19105
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 4,289,821 + AO356_19090 0.58 -0.7 4,289,821 + AO356_19090 0.58 -1.7 4,289,822 - AO356_19090 0.58 -2.6 4,289,822 - AO356_19090 0.58 -2.7 4,289,944 + AO356_19090 0.69 -2.0 4,289,944 + AO356_19090 0.69 -1.1 4,290,332 + -2.3 4,290,434 + AO356_19095 0.24 -0.1 4,290,434 + AO356_19095 0.24 +0.3 4,290,434 + AO356_19095 0.24 +0.2 4,290,434 + AO356_19095 0.24 +0.1 4,290,435 - AO356_19095 0.25 -0.5 4,290,435 - AO356_19095 0.25 -0.3 4,290,435 - AO356_19095 0.25 -0.2 4,290,455 - AO356_19095 0.35 +1.1 4,290,461 + AO356_19095 0.39 -0.7 4,290,461 + AO356_19095 0.39 +0.0 4,290,461 + AO356_19095 0.39 +0.7 4,290,461 + AO356_19095 0.39 +1.1 4,290,462 - AO356_19095 0.39 -0.4 4,290,462 - AO356_19095 0.39 -0.8 4,290,463 + AO356_19095 0.40 +0.6 4,290,463 + AO356_19095 0.40 +0.1 4,290,463 + AO356_19095 0.40 -0.3 4,290,464 - AO356_19095 0.40 -0.0 4,290,464 - AO356_19095 0.40 -0.9 4,290,464 - AO356_19095 0.40 -0.5 4,290,464 - AO356_19095 0.40 +0.5 4,290,469 + AO356_19095 0.43 +0.1 4,290,469 + AO356_19095 0.43 +0.7 4,290,487 + AO356_19095 0.52 +0.4 4,290,487 + AO356_19095 0.52 -0.0 4,290,487 + AO356_19095 0.52 +0.1 4,290,487 + AO356_19095 0.52 +0.4 4,290,487 + AO356_19095 0.52 +0.1 4,290,487 + AO356_19095 0.52 +0.4 4,290,487 + AO356_19095 0.52 -0.3 4,290,487 + AO356_19095 0.52 +0.5 4,290,488 - AO356_19095 0.53 +0.1 4,290,488 - AO356_19095 0.53 +0.4 4,290,488 - AO356_19095 0.53 +0.5 4,290,488 - AO356_19095 0.53 +0.3 4,290,488 - AO356_19095 0.53 +0.4 4,290,488 - AO356_19095 0.53 +1.4 4,290,488 - AO356_19095 0.53 -0.0 4,290,488 - AO356_19095 0.53 +1.1 4,290,489 + AO356_19095 0.53 -0.1 4,290,489 + AO356_19095 0.53 -1.6 4,290,489 + AO356_19095 0.53 +0.3 4,290,489 + AO356_19095 0.53 -0.4 4,290,489 + AO356_19095 0.53 -0.2 4,290,489 + AO356_19095 0.53 -0.3 4,290,489 + AO356_19095 0.53 +0.1 4,290,489 + AO356_19095 0.53 +0.4 4,290,489 + AO356_19095 0.53 +0.4 4,290,489 + AO356_19095 0.53 +0.1 4,290,489 + AO356_19095 0.53 +0.5 4,290,489 + AO356_19095 0.53 +0.3 4,290,490 - AO356_19095 0.54 +0.4 4,290,490 - AO356_19095 0.54 +1.1 4,290,490 - AO356_19095 0.54 +0.2 4,290,490 - AO356_19095 0.54 -0.8 4,290,490 - AO356_19095 0.54 -0.0 4,290,490 - AO356_19095 0.54 -0.3 4,290,490 - AO356_19095 0.54 +0.3 4,290,497 - AO356_19095 0.57 -1.8 4,290,712 + -1.5 4,290,712 + +0.5 4,290,712 + -2.1 4,290,713 - +0.4 4,290,783 + AO356_19100 0.14 +0.7 4,290,783 + AO356_19100 0.14 +0.1 4,290,877 + AO356_19100 0.23 +0.8 4,290,877 + AO356_19100 0.23 -0.6 4,290,878 - AO356_19100 0.23 +0.3 4,290,933 + AO356_19100 0.29 -0.2 4,291,257 + AO356_19100 0.59 +1.4 4,291,257 + AO356_19100 0.59 +1.2 4,291,257 + AO356_19100 0.59 -0.8 4,291,257 + AO356_19100 0.59 -0.3 4,291,257 + AO356_19100 0.59 +0.1 4,291,258 - AO356_19100 0.59 -0.0 4,291,258 - AO356_19100 0.59 +0.4 4,291,687 + +0.5 4,291,687 + -0.4 4,291,688 - +0.1 4,291,702 + +2.5 4,291,702 + -0.0 4,291,702 + +1.1 4,291,702 + +0.5 4,291,703 - -0.4 4,291,703 - -1.1 4,291,703 - +0.4 4,291,703 - -0.1 4,291,703 - +0.3 4,291,704 + +1.3 4,291,704 + +0.1 4,291,704 + +0.0 4,291,704 + +0.8 4,291,704 + +0.6 4,291,704 + -0.1 4,291,704 + -0.1 4,291,704 + +0.1 4,291,705 - +0.6 4,291,705 - -0.6 4,291,705 - -2.2 4,291,706 + +0.7 4,291,706 + +0.6 4,291,706 + -0.3 4,291,706 + +0.7 4,291,706 + +0.4 4,291,706 + -0.1 4,291,706 + -0.4 4,291,706 + +0.1 4,291,706 + +0.5 4,291,707 - +0.7 4,291,707 - +0.7 4,291,707 - +0.3 4,291,707 - +1.1 4,291,707 - -2.1 4,291,707 - +0.3 4,291,707 - +1.0 4,291,710 + -0.3 4,291,710 + -0.5 4,291,710 + -0.5 4,291,710 + +0.4 4,291,710 + +0.8 4,291,710 + -0.0 4,291,710 + +0.8 4,291,711 - +0.7 4,291,711 - +0.3 4,291,711 - -0.9 4,291,711 - -0.5 4,291,711 - +0.7 4,291,711 - +0.6 4,291,778 + -0.1 4,291,778 + +0.4 4,291,778 + +0.3 4,291,779 - -0.1 4,291,779 - +0.2 4,291,779 - -0.5 4,291,779 - -0.5 4,291,779 - +0.5 4,291,782 + +0.5 4,291,782 + -0.3 4,291,782 + +0.4 4,291,783 - -0.2 4,291,783 - +0.3 4,291,783 - +1.0 4,291,833 + AO356_19105 0.10 +0.1 4,291,833 + AO356_19105 0.10 +0.4 4,291,834 - AO356_19105 0.10 +1.4 4,291,834 - AO356_19105 0.10 +0.6 4,291,834 - AO356_19105 0.10 +1.2 4,291,834 - AO356_19105 0.10 +0.0 4,291,940 - AO356_19105 0.20 -0.7 4,291,940 - AO356_19105 0.20 +0.4 4,291,940 - AO356_19105 0.20 -0.9 4,291,940 - AO356_19105 0.20 -1.5 4,291,984 - AO356_19105 0.24 +0.8 4,292,220 + AO356_19105 0.46 -1.3 4,292,220 + AO356_19105 0.46 -0.3 4,292,220 + AO356_19105 0.46 +0.3 4,292,220 + AO356_19105 0.46 +0.6 4,292,221 - AO356_19105 0.46 +0.5 4,292,221 - AO356_19105 0.46 +0.7 4,292,356 + AO356_19105 0.59 +0.2 4,292,379 + AO356_19105 0.61 -0.1 4,292,380 - AO356_19105 0.61 -0.1 4,292,460 + AO356_19105 0.69 -0.7 4,292,460 + AO356_19105 0.69 -0.3 4,292,460 + AO356_19105 0.69 +0.7 4,292,461 - AO356_19105 0.69 -1.0 4,292,461 - AO356_19105 0.69 +0.7 4,292,461 - AO356_19105 0.69 +0.6 4,292,461 - AO356_19105 0.69 -0.2 4,292,461 - AO356_19105 0.69 +0.4 4,292,461 - AO356_19105 0.69 -0.7 4,292,461 - AO356_19105 0.69 +0.8 4,292,461 - AO356_19105 0.69 +1.3 4,292,461 - AO356_19105 0.69 +0.9 4,292,461 - AO356_19105 0.69 +0.5
Or see this region's nucleotide sequence