Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_12035 and AO356_12040 overlap by 4 nucleotides AO356_12040 and AO356_12045 are separated by 113 nucleotides
AO356_12035: AO356_12035 - amino acid ABC transporter permease, at 2,730,993 to 2,731,826
_12035
AO356_12040: AO356_12040 - amino acid ABC transporter substrate-binding protein, at 2,731,823 to 2,732,644
_12040
AO356_12045: AO356_12045 - homocysteine methyltransferase, at 2,732,758 to 2,733,657
_12045
Position (kb)
2731
2732
2733 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2730.829 kb on + strand at 2730.829 kb on + strand at 2730.829 kb on + strand at 2730.829 kb on + strand at 2730.830 kb on - strand at 2730.830 kb on - strand at 2730.830 kb on - strand at 2730.843 kb on + strand at 2730.843 kb on + strand at 2730.843 kb on + strand at 2730.844 kb on - strand at 2730.844 kb on - strand at 2730.844 kb on - strand at 2730.844 kb on - strand at 2730.844 kb on - strand at 2730.844 kb on - strand at 2730.844 kb on - strand at 2730.844 kb on - strand at 2730.910 kb on + strand at 2730.910 kb on + strand at 2730.910 kb on + strand at 2730.910 kb on + strand at 2730.910 kb on + strand at 2730.910 kb on + strand at 2730.911 kb on - strand at 2730.911 kb on - strand at 2730.911 kb on - strand at 2730.911 kb on - strand at 2730.911 kb on - strand at 2730.911 kb on - strand at 2730.911 kb on - strand at 2730.911 kb on - strand at 2730.911 kb on - strand at 2730.911 kb on - strand at 2730.911 kb on - strand at 2731.010 kb on - strand at 2731.021 kb on + strand at 2731.021 kb on + strand at 2731.075 kb on + strand at 2731.075 kb on + strand at 2731.075 kb on + strand at 2731.075 kb on + strand at 2731.075 kb on + strand at 2731.076 kb on - strand at 2731.108 kb on + strand, within AO356_12035 at 2731.108 kb on + strand, within AO356_12035 at 2731.108 kb on + strand, within AO356_12035 at 2731.108 kb on + strand, within AO356_12035 at 2731.108 kb on + strand, within AO356_12035 at 2731.108 kb on + strand, within AO356_12035 at 2731.109 kb on - strand, within AO356_12035 at 2731.109 kb on - strand, within AO356_12035 at 2731.109 kb on - strand, within AO356_12035 at 2731.109 kb on - strand, within AO356_12035 at 2731.109 kb on - strand, within AO356_12035 at 2731.109 kb on - strand, within AO356_12035 at 2731.115 kb on - strand, within AO356_12035 at 2731.129 kb on + strand, within AO356_12035 at 2731.129 kb on + strand, within AO356_12035 at 2731.129 kb on + strand, within AO356_12035 at 2731.129 kb on + strand, within AO356_12035 at 2731.129 kb on + strand, within AO356_12035 at 2731.130 kb on - strand, within AO356_12035 at 2731.130 kb on - strand, within AO356_12035 at 2731.130 kb on - strand, within AO356_12035 at 2731.130 kb on - strand, within AO356_12035 at 2731.357 kb on + strand, within AO356_12035 at 2731.366 kb on + strand, within AO356_12035 at 2731.366 kb on + strand, within AO356_12035 at 2731.366 kb on + strand, within AO356_12035 at 2731.366 kb on + strand, within AO356_12035 at 2731.367 kb on - strand, within AO356_12035 at 2731.367 kb on - strand, within AO356_12035 at 2731.439 kb on - strand, within AO356_12035 at 2731.489 kb on + strand, within AO356_12035 at 2731.741 kb on + strand, within AO356_12035 at 2731.741 kb on + strand, within AO356_12035 at 2731.741 kb on + strand, within AO356_12035 at 2731.741 kb on + strand, within AO356_12035 at 2731.741 kb on + strand, within AO356_12035 at 2731.741 kb on + strand, within AO356_12035 at 2731.741 kb on + strand, within AO356_12035 at 2731.742 kb on - strand, within AO356_12035 at 2731.742 kb on - strand, within AO356_12035 at 2731.742 kb on - strand, within AO356_12035 at 2731.742 kb on - strand, within AO356_12035 at 2732.104 kb on - strand, within AO356_12040 at 2732.134 kb on - strand, within AO356_12040 at 2732.134 kb on - strand, within AO356_12040 at 2732.184 kb on + strand, within AO356_12040 at 2732.184 kb on + strand, within AO356_12040 at 2732.184 kb on + strand, within AO356_12040 at 2732.185 kb on - strand, within AO356_12040 at 2732.185 kb on - strand, within AO356_12040 at 2732.194 kb on - strand, within AO356_12040 at 2732.194 kb on - strand, within AO356_12040 at 2732.251 kb on + strand, within AO356_12040 at 2732.252 kb on - strand, within AO356_12040 at 2732.295 kb on + strand, within AO356_12040 at 2732.295 kb on + strand, within AO356_12040 at 2732.295 kb on + strand, within AO356_12040 at 2732.295 kb on + strand, within AO356_12040 at 2732.295 kb on + strand, within AO356_12040 at 2732.295 kb on + strand, within AO356_12040 at 2732.295 kb on + strand, within AO356_12040 at 2732.295 kb on + strand, within AO356_12040 at 2732.296 kb on - strand, within AO356_12040 at 2732.296 kb on - strand, within AO356_12040 at 2732.296 kb on - strand, within AO356_12040 at 2732.298 kb on + strand, within AO356_12040 at 2732.299 kb on - strand, within AO356_12040 at 2732.299 kb on - strand, within AO356_12040 at 2732.299 kb on - strand, within AO356_12040 at 2732.299 kb on - strand, within AO356_12040 at 2732.299 kb on - strand, within AO356_12040 at 2732.299 kb on - strand, within AO356_12040 at 2732.367 kb on + strand, within AO356_12040 at 2732.368 kb on - strand, within AO356_12040 at 2732.368 kb on - strand, within AO356_12040 at 2732.517 kb on + strand, within AO356_12040 at 2732.531 kb on + strand, within AO356_12040 at 2732.666 kb on + strand at 2732.666 kb on + strand at 2732.673 kb on + strand at 2732.673 kb on + strand at 2732.673 kb on + strand at 2732.673 kb on + strand at 2732.673 kb on + strand at 2732.673 kb on + strand at 2732.673 kb on + strand at 2732.674 kb on - strand at 2732.674 kb on - strand at 2732.880 kb on - strand, within AO356_12045 at 2732.899 kb on + strand, within AO356_12045 at 2732.900 kb on - strand, within AO356_12045 at 2732.900 kb on - strand, within AO356_12045 at 2732.938 kb on + strand, within AO356_12045 at 2732.939 kb on - strand, within AO356_12045 at 2732.939 kb on - strand, within AO356_12045 at 2732.939 kb on - strand, within AO356_12045 at 2732.939 kb on - strand, within AO356_12045 at 2732.939 kb on - strand, within AO356_12045 at 2732.939 kb on - strand, within AO356_12045 at 2732.939 kb on - strand, within AO356_12045 at 2733.218 kb on + strand, within AO356_12045 at 2733.218 kb on + strand, within AO356_12045 at 2733.219 kb on - strand, within AO356_12045 at 2733.550 kb on + strand, within AO356_12045 at 2733.627 kb on + strand at 2733.627 kb on + strand at 2733.627 kb on + strand at 2733.627 kb on + strand at 2733.627 kb on + strand at 2733.627 kb on + strand at 2733.627 kb on + strand at 2733.627 kb on + strand at 2733.627 kb on + strand at 2733.628 kb on - strand at 2733.628 kb on - strand at 2733.628 kb on - strand at 2733.628 kb on - strand at 2733.628 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 2,730,829 + +0.8 2,730,829 + -3.3 2,730,829 + +0.7 2,730,829 + +0.1 2,730,830 - +0.1 2,730,830 - -0.4 2,730,830 - -1.5 2,730,843 + +2.5 2,730,843 + -0.2 2,730,843 + +0.9 2,730,844 - -0.0 2,730,844 - -0.4 2,730,844 - +1.1 2,730,844 - +0.5 2,730,844 - +0.9 2,730,844 - -0.1 2,730,844 - +1.0 2,730,844 - +1.0 2,730,910 + +0.7 2,730,910 + +0.3 2,730,910 + +0.1 2,730,910 + -1.4 2,730,910 + -0.1 2,730,910 + -0.2 2,730,911 - -0.1 2,730,911 - +0.2 2,730,911 - +1.6 2,730,911 - +1.1 2,730,911 - -1.4 2,730,911 - +0.5 2,730,911 - +0.6 2,730,911 - +0.8 2,730,911 - +1.3 2,730,911 - -0.1 2,730,911 - +0.5 2,731,010 - -0.9 2,731,021 + +0.6 2,731,021 + +0.2 2,731,075 + +0.5 2,731,075 + +0.3 2,731,075 + +0.3 2,731,075 + -0.9 2,731,075 + -0.2 2,731,076 - -0.1 2,731,108 + AO356_12035 0.14 -1.2 2,731,108 + AO356_12035 0.14 -0.2 2,731,108 + AO356_12035 0.14 +0.3 2,731,108 + AO356_12035 0.14 +1.1 2,731,108 + AO356_12035 0.14 +1.1 2,731,108 + AO356_12035 0.14 -0.4 2,731,109 - AO356_12035 0.14 +0.1 2,731,109 - AO356_12035 0.14 -0.4 2,731,109 - AO356_12035 0.14 +0.3 2,731,109 - AO356_12035 0.14 -0.1 2,731,109 - AO356_12035 0.14 -0.1 2,731,109 - AO356_12035 0.14 +0.4 2,731,115 - AO356_12035 0.15 +0.9 2,731,129 + AO356_12035 0.16 -0.4 2,731,129 + AO356_12035 0.16 -0.8 2,731,129 + AO356_12035 0.16 -0.5 2,731,129 + AO356_12035 0.16 +1.6 2,731,129 + AO356_12035 0.16 +0.1 2,731,130 - AO356_12035 0.16 +0.4 2,731,130 - AO356_12035 0.16 +0.7 2,731,130 - AO356_12035 0.16 -0.4 2,731,130 - AO356_12035 0.16 +1.7 2,731,357 + AO356_12035 0.44 -0.0 2,731,366 + AO356_12035 0.45 -0.5 2,731,366 + AO356_12035 0.45 +0.0 2,731,366 + AO356_12035 0.45 -0.3 2,731,366 + AO356_12035 0.45 -0.2 2,731,367 - AO356_12035 0.45 -0.1 2,731,367 - AO356_12035 0.45 -0.2 2,731,439 - AO356_12035 0.53 +0.1 2,731,489 + AO356_12035 0.59 -0.6 2,731,741 + AO356_12035 0.90 -1.5 2,731,741 + AO356_12035 0.90 -0.0 2,731,741 + AO356_12035 0.90 +0.0 2,731,741 + AO356_12035 0.90 +1.0 2,731,741 + AO356_12035 0.90 +0.5 2,731,741 + AO356_12035 0.90 -0.5 2,731,741 + AO356_12035 0.90 -1.3 2,731,742 - AO356_12035 0.90 -0.4 2,731,742 - AO356_12035 0.90 +0.5 2,731,742 - AO356_12035 0.90 +0.5 2,731,742 - AO356_12035 0.90 +0.7 2,732,104 - AO356_12040 0.34 -1.1 2,732,134 - AO356_12040 0.38 +1.2 2,732,134 - AO356_12040 0.38 -0.3 2,732,184 + AO356_12040 0.44 +0.8 2,732,184 + AO356_12040 0.44 +0.4 2,732,184 + AO356_12040 0.44 +0.2 2,732,185 - AO356_12040 0.44 +0.5 2,732,185 - AO356_12040 0.44 +0.6 2,732,194 - AO356_12040 0.45 +0.2 2,732,194 - AO356_12040 0.45 -0.3 2,732,251 + AO356_12040 0.52 +0.9 2,732,252 - AO356_12040 0.52 +0.2 2,732,295 + AO356_12040 0.57 +0.8 2,732,295 + AO356_12040 0.57 -0.3 2,732,295 + AO356_12040 0.57 -0.2 2,732,295 + AO356_12040 0.57 +0.1 2,732,295 + AO356_12040 0.57 -0.3 2,732,295 + AO356_12040 0.57 +0.8 2,732,295 + AO356_12040 0.57 +0.2 2,732,295 + AO356_12040 0.57 -0.4 2,732,296 - AO356_12040 0.58 +0.2 2,732,296 - AO356_12040 0.58 -0.1 2,732,296 - AO356_12040 0.58 +0.7 2,732,298 + AO356_12040 0.58 -0.9 2,732,299 - AO356_12040 0.58 +1.1 2,732,299 - AO356_12040 0.58 -0.1 2,732,299 - AO356_12040 0.58 +0.3 2,732,299 - AO356_12040 0.58 +0.2 2,732,299 - AO356_12040 0.58 +0.9 2,732,299 - AO356_12040 0.58 +0.2 2,732,367 + AO356_12040 0.66 +0.5 2,732,368 - AO356_12040 0.66 +0.6 2,732,368 - AO356_12040 0.66 +0.0 2,732,517 + AO356_12040 0.84 +0.5 2,732,531 + AO356_12040 0.86 +1.9 2,732,666 + +0.0 2,732,666 + -1.3 2,732,673 + -0.1 2,732,673 + -0.1 2,732,673 + +0.2 2,732,673 + +0.4 2,732,673 + +0.2 2,732,673 + -0.1 2,732,673 + +0.2 2,732,674 - -0.9 2,732,674 - +0.3 2,732,880 - AO356_12045 0.14 +0.6 2,732,899 + AO356_12045 0.16 +1.1 2,732,900 - AO356_12045 0.16 -0.2 2,732,900 - AO356_12045 0.16 +0.5 2,732,938 + AO356_12045 0.20 +0.1 2,732,939 - AO356_12045 0.20 -0.4 2,732,939 - AO356_12045 0.20 -1.0 2,732,939 - AO356_12045 0.20 -1.1 2,732,939 - AO356_12045 0.20 +0.8 2,732,939 - AO356_12045 0.20 +1.1 2,732,939 - AO356_12045 0.20 +0.5 2,732,939 - AO356_12045 0.20 +0.5 2,733,218 + AO356_12045 0.51 -0.0 2,733,218 + AO356_12045 0.51 -0.1 2,733,219 - AO356_12045 0.51 +2.0 2,733,550 + AO356_12045 0.88 -0.6 2,733,627 + +0.6 2,733,627 + +0.2 2,733,627 + -0.9 2,733,627 + -0.1 2,733,627 + -0.4 2,733,627 + +0.3 2,733,627 + +0.0 2,733,627 + +0.2 2,733,627 + +0.7 2,733,628 - +0.5 2,733,628 - +0.9 2,733,628 - -1.0 2,733,628 - -0.8 2,733,628 - +0.2
Or see this region's nucleotide sequence