Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0881 and Dshi_0882 are separated by 1 nucleotides Dshi_0882 and Dshi_0883 are separated by 4 nucleotides Dshi_0883 and Dshi_0884 are separated by 219 nucleotides
Dshi_0881: Dshi_0881 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 896,659 to 897,645
_0881
Dshi_0882: Dshi_0882 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 897,647 to 898,615
_0882
Dshi_0883: Dshi_0883 - hypothetical protein (RefSeq), at 898,620 to 898,811
_0883
Dshi_0884: Dshi_0884 - oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq), at 899,031 to 900,113
_0884
Position (kb)
898
899 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 897.777 kb on - strand, within Dshi_0882 at 897.863 kb on - strand, within Dshi_0882 at 897.891 kb on + strand, within Dshi_0882 at 897.940 kb on + strand, within Dshi_0882 at 898.029 kb on + strand, within Dshi_0882 at 898.031 kb on - strand, within Dshi_0882 at 898.065 kb on + strand, within Dshi_0882 at 898.228 kb on - strand, within Dshi_0882 at 898.262 kb on + strand, within Dshi_0882 at 898.317 kb on + strand, within Dshi_0882 at 898.351 kb on - strand, within Dshi_0882 at 898.562 kb on - strand at 898.653 kb on + strand, within Dshi_0883 at 898.653 kb on - strand, within Dshi_0883 at 898.822 kb on + strand at 898.869 kb on + strand at 899.024 kb on - strand at 899.064 kb on + strand at 899.151 kb on + strand, within Dshi_0884 at 899.328 kb on + strand, within Dshi_0884 at 899.437 kb on + strand, within Dshi_0884 at 899.515 kb on + strand, within Dshi_0884 at 899.550 kb on - strand, within Dshi_0884 at 899.589 kb on - strand, within Dshi_0884 at 899.757 kb on - strand, within Dshi_0884 at 899.765 kb on - strand, within Dshi_0884 at 899.785 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 897,777 - Dshi_0882 0.13 +2.5 897,863 - Dshi_0882 0.22 -0.3 897,891 + Dshi_0882 0.25 +0.1 897,940 + Dshi_0882 0.30 -1.2 898,029 + Dshi_0882 0.39 -1.8 898,031 - Dshi_0882 0.40 +0.1 898,065 + Dshi_0882 0.43 +0.3 898,228 - Dshi_0882 0.60 -0.2 898,262 + Dshi_0882 0.63 -0.4 898,317 + Dshi_0882 0.69 -0.4 898,351 - Dshi_0882 0.73 -0.1 898,562 - -0.4 898,653 + Dshi_0883 0.17 -1.6 898,653 - Dshi_0883 0.17 -0.8 898,822 + -0.5 898,869 + -0.1 899,024 - -0.5 899,064 + -0.2 899,151 + Dshi_0884 0.11 +0.1 899,328 + Dshi_0884 0.27 -0.8 899,437 + Dshi_0884 0.37 +1.1 899,515 + Dshi_0884 0.45 -0.7 899,550 - Dshi_0884 0.48 +0.0 899,589 - Dshi_0884 0.52 -0.9 899,757 - Dshi_0884 0.67 +0.7 899,765 - Dshi_0884 0.68 +0.1 899,785 + +0.5
Or see this region's nucleotide sequence