Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2123 and Ga0059261_2124 are separated by 39 nucleotides Ga0059261_2124 and Ga0059261_2125 are separated by 90 nucleotides
Ga0059261_2123: Ga0059261_2123 - Geranylgeranyl pyrophosphate synthase, at 2,237,474 to 2,238,487
_2123
Ga0059261_2124: Ga0059261_2124 - hypothetical protein, at 2,238,527 to 2,238,739
_2124
Ga0059261_2125: Ga0059261_2125 - ATP-dependent helicase HrpB, at 2,238,830 to 2,241,286
_2125
Position (kb)
2238
2239 Strain fitness (log2 ratio)
-1
0
1
2 at 2238.528 kb on + strand at 2238.528 kb on + strand at 2238.528 kb on + strand at 2238.528 kb on + strand at 2238.529 kb on - strand at 2238.529 kb on - strand at 2238.617 kb on + strand, within Ga0059261_2124 at 2238.617 kb on + strand, within Ga0059261_2124 at 2238.617 kb on + strand, within Ga0059261_2124 at 2238.617 kb on + strand, within Ga0059261_2124 at 2238.617 kb on + strand, within Ga0059261_2124 at 2238.617 kb on + strand, within Ga0059261_2124 at 2238.618 kb on - strand, within Ga0059261_2124 at 2238.618 kb on - strand, within Ga0059261_2124 at 2238.633 kb on + strand, within Ga0059261_2124 at 2238.633 kb on + strand, within Ga0059261_2124 at 2238.633 kb on + strand, within Ga0059261_2124 at 2238.633 kb on + strand, within Ga0059261_2124 at 2238.633 kb on + strand, within Ga0059261_2124 at 2238.633 kb on + strand, within Ga0059261_2124 at 2238.633 kb on + strand, within Ga0059261_2124 at 2238.633 kb on + strand, within Ga0059261_2124 at 2238.634 kb on - strand, within Ga0059261_2124 at 2238.634 kb on - strand, within Ga0059261_2124 at 2238.634 kb on - strand, within Ga0059261_2124 at 2238.634 kb on - strand, within Ga0059261_2124 at 2238.634 kb on - strand, within Ga0059261_2124 at 2238.634 kb on - strand, within Ga0059261_2124 at 2238.687 kb on + strand, within Ga0059261_2124 at 2238.687 kb on + strand, within Ga0059261_2124 at 2238.688 kb on - strand, within Ga0059261_2124 at 2238.688 kb on - strand, within Ga0059261_2124 at 2238.818 kb on + strand at 2238.819 kb on - strand at 2238.819 kb on - strand at 2238.901 kb on - strand at 2239.716 kb on - strand, within Ga0059261_2125
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,238,528 + +0.6 2,238,528 + +0.6 2,238,528 + +0.9 2,238,528 + -0.1 2,238,529 - -0.5 2,238,529 - +2.0 2,238,617 + Ga0059261_2124 0.42 +1.1 2,238,617 + Ga0059261_2124 0.42 -0.2 2,238,617 + Ga0059261_2124 0.42 +2.5 2,238,617 + Ga0059261_2124 0.42 +0.6 2,238,617 + Ga0059261_2124 0.42 +0.8 2,238,617 + Ga0059261_2124 0.42 +1.5 2,238,618 - Ga0059261_2124 0.43 +0.8 2,238,618 - Ga0059261_2124 0.43 +2.5 2,238,633 + Ga0059261_2124 0.50 +0.5 2,238,633 + Ga0059261_2124 0.50 +0.1 2,238,633 + Ga0059261_2124 0.50 +2.5 2,238,633 + Ga0059261_2124 0.50 +0.9 2,238,633 + Ga0059261_2124 0.50 -0.7 2,238,633 + Ga0059261_2124 0.50 +0.6 2,238,633 + Ga0059261_2124 0.50 +0.3 2,238,633 + Ga0059261_2124 0.50 +0.4 2,238,634 - Ga0059261_2124 0.50 +0.9 2,238,634 - Ga0059261_2124 0.50 +0.9 2,238,634 - Ga0059261_2124 0.50 -0.3 2,238,634 - Ga0059261_2124 0.50 +0.5 2,238,634 - Ga0059261_2124 0.50 +1.7 2,238,634 - Ga0059261_2124 0.50 +0.9 2,238,687 + Ga0059261_2124 0.75 +0.7 2,238,687 + Ga0059261_2124 0.75 +0.5 2,238,688 - Ga0059261_2124 0.76 +1.5 2,238,688 - Ga0059261_2124 0.76 +1.5 2,238,818 + +1.3 2,238,819 - +0.7 2,238,819 - +0.6 2,238,901 - +1.2 2,239,716 - Ga0059261_2125 0.36 +1.2
Or see this region's nucleotide sequence