Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_30225

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
7,054,279	-		AO356_30220	0.45	-0.0
7,054,577	-		AO356_30220	0.66	-0.6
7,054,584	+		AO356_30220	0.66	-0.3
7,054,584	+		AO356_30220	0.66	+1.1
7,054,584	+		AO356_30220	0.66	+0.5
7,054,584	+		AO356_30220	0.66	+0.2
7,054,604	+		AO356_30220	0.68	+0.7
7,054,604	+		AO356_30220	0.68	-0.2
7,054,604	+		AO356_30220	0.68	-2.1
7,054,605	-		AO356_30220	0.68	-2.4
7,054,718	+		AO356_30220	0.75	+0.6
7,054,719	-		AO356_30220	0.76	-0.5
7,054,749	+		AO356_30220	0.78	+1.0
7,054,749	+		AO356_30220	0.78	-0.8
7,054,749	+		AO356_30220	0.78	+0.6
7,054,749	+		AO356_30220	0.78	+0.2
7,054,749	+		AO356_30220	0.78	+1.2
7,054,749	+		AO356_30220	0.78	-1.4
7,054,749	+		AO356_30220	0.78	+0.6
7,054,750	-		AO356_30220	0.78	-0.3
7,054,750	-		AO356_30220	0.78	+0.6
7,054,750	-		AO356_30220	0.78	+0.1
7,054,750	-		AO356_30220	0.78	-0.1
7,054,819	+		AO356_30220	0.82	-0.1
7,054,820	-		AO356_30220	0.83	+0.6
7,054,845	-		AO356_30220	0.84	-0.3
7,054,902	-		AO356_30220	0.88	+0.5
7,054,902	-		AO356_30220	0.88	-0.2
7,054,902	-		AO356_30220	0.88	-0.2
7,055,052	-				-0.3
7,055,052	-				+0.6
7,055,408	+		AO356_30225	0.16	-0.9
7,055,408	+		AO356_30225	0.16	+0.7
7,055,409	-		AO356_30225	0.16	-0.6
7,055,409	-		AO356_30225	0.16	+0.4
7,055,414	+		AO356_30225	0.16	-0.1
7,055,415	-		AO356_30225	0.16	-1.0
7,055,415	-		AO356_30225	0.16	+1.0
7,055,415	-		AO356_30225	0.16	-0.4
7,055,418	+		AO356_30225	0.17	+0.9
7,055,418	+		AO356_30225	0.17	-0.1
7,055,418	+		AO356_30225	0.17	-1.4
7,055,418	+		AO356_30225	0.17	+0.3
7,055,418	+		AO356_30225	0.17	-0.3
7,055,419	-		AO356_30225	0.17	-0.5
7,055,540	+		AO356_30225	0.24	+0.2
7,055,540	+		AO356_30225	0.24	+0.9
7,055,637	-		AO356_30225	0.30	+0.7
7,055,735	+		AO356_30225	0.36	-0.2
7,055,735	+		AO356_30225	0.36	+0.7
7,055,736	-		AO356_30225	0.36	+0.2
7,055,736	-		AO356_30225	0.36	+0.4
7,055,758	-		AO356_30225	0.37	-1.3
7,055,795	+		AO356_30225	0.40	+0.6
7,055,848	+		AO356_30225	0.43	+0.2
7,055,848	+		AO356_30225	0.43	+0.6
7,055,849	-		AO356_30225	0.43	-0.8
7,055,903	+		AO356_30225	0.46	+0.4
7,055,904	-		AO356_30225	0.46	+0.5
7,055,904	-		AO356_30225	0.46	-1.1
7,056,059	+		AO356_30225	0.56	+1.4
7,056,059	+		AO356_30225	0.56	-0.5
7,056,059	+		AO356_30225	0.56	-0.7
7,056,059	+		AO356_30225	0.56	-0.6
7,056,060	-		AO356_30225	0.56	+0.2
7,056,060	-		AO356_30225	0.56	+0.1
7,056,064	-		AO356_30225	0.56	+0.3
7,056,064	-		AO356_30225	0.56	-1.1
7,056,064	-		AO356_30225	0.56	-0.7
7,056,094	+		AO356_30225	0.58	-0.1
7,056,094	+		AO356_30225	0.58	-0.1
7,056,095	-		AO356_30225	0.58	-0.5
7,056,122	-		AO356_30225	0.59	-0.1
7,056,244	+		AO356_30225	0.67	-0.2
7,056,244	+		AO356_30225	0.67	-2.4
7,056,244	+		AO356_30225	0.67	-0.6
7,056,310	+		AO356_30225	0.71	-0.5
7,056,313	-		AO356_30225	0.71	+0.2
7,056,321	-		AO356_30225	0.72	-0.0
7,056,324	+		AO356_30225	0.72	-0.8
7,056,325	-		AO356_30225	0.72	+1.4
7,056,325	-		AO356_30225	0.72	+0.8
7,056,325	-		AO356_30225	0.72	+0.1
7,056,380	+		AO356_30225	0.75	+0.7
7,056,422	+		AO356_30225	0.78	-0.0
7,056,423	-		AO356_30225	0.78	+0.7
7,056,505	+		AO356_30225	0.83	-0.2
7,056,505	+		AO356_30225	0.83	-0.8
7,056,505	+		AO356_30225	0.83	-0.3
7,056,557	+		AO356_30225	0.86	-1.7
7,056,557	+		AO356_30225	0.86	+0.7
7,056,558	-		AO356_30225	0.86	+0.5
7,056,558	-		AO356_30225	0.86	-0.1
7,056,626	+				+0.7
7,056,651	+				+0.9
7,056,652	-				+0.6
7,056,690	+				+0.4
7,056,770	+				+1.1
7,056,771	-				+1.2
7,056,777	-				+0.2
7,056,789	-				+1.1
7,056,804	+				+0.4
7,056,889	-		AO356_30230	0.13	+0.0
7,056,923	+		AO356_30230	0.18	-1.1
7,056,924	-		AO356_30230	0.18	+0.1
7,056,924	-		AO356_30230	0.18	-0.1
7,056,924	-		AO356_30230	0.18	-0.7
7,056,925	+		AO356_30230	0.18	-0.5
7,056,925	+		AO356_30230	0.18	+0.4
7,056,925	+		AO356_30230	0.18	+0.1
7,056,925	+		AO356_30230	0.18	-1.6
7,056,925	+		AO356_30230	0.18	-2.8
7,056,926	-		AO356_30230	0.18	-0.1
7,057,004	-		AO356_30230	0.30	-0.1
7,057,043	+		AO356_30230	0.36	-1.1
7,057,043	+		AO356_30230	0.36	-0.6
7,057,043	+		AO356_30230	0.36	-0.4
7,057,043	+		AO356_30230	0.36	-0.6
7,057,043	+		AO356_30230	0.36	+0.0
7,057,044	-		AO356_30230	0.36	-1.1
7,057,067	+		AO356_30230	0.39	+0.6
7,057,067	+		AO356_30230	0.39	-1.1
7,057,552	+				+0.2
7,057,552	+				+0.1
7,057,552	+				-0.7
7,057,553	-				+0.3
7,057,606	+				+1.1
7,057,606	+				-0.6
7,057,606	+				+0.4
7,057,606	+				+1.8
7,057,607	-				+0.1
7,057,607	-				-0.0
7,057,607	-				+0.7
7,057,607	-				+0.1
7,057,607	-				+0.3
7,057,607	-				-0.6
7,057,607	-				-1.0
7,057,607	-				+0.5
7,057,607	-				+0.9
7,057,640	+				-0.8
7,057,654	+				+0.6
7,057,682	+				-0.5
7,057,682	+				+1.0
7,057,683	-				-0.3
7,057,683	-				+0.6
7,057,683	-				+0.3
7,057,683	-				-0.4
7,057,777	+		AO356_30235	0.12	+0.8
7,057,777	+		AO356_30235	0.12	+0.1
7,057,777	+		AO356_30235	0.12	+0.2
7,057,777	+		AO356_30235	0.12	-0.4
7,057,777	+		AO356_30235	0.12	-0.2
7,057,777	+		AO356_30235	0.12	-1.4
7,057,778	-		AO356_30235	0.12	+0.0
7,057,778	-		AO356_30235	0.12	+0.5
7,057,778	-		AO356_30235	0.12	+0.8